RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 SFXN3Q9BWM7 321 aa6.81□□□□□ -1.32
SCN8A-201ENST00000354534 COL22A1Q8NFW1 1626 aaPredicted RBP6.81□□□□□ -1.32
SCN8A-201ENST00000354534 RS1O15537 224 aa6.81□□□□□ -1.32
SCN8A-201ENST00000354534 RAMP1O60894 148 aa6.81□□□□□ -1.32
SCN8A-201ENST00000354534 DOCK3Q8IZD9 2030 aa6.81□□□□□ -1.32
SCN8A-201ENST00000354534 LIPT2A6NK58 231 aa6.81□□□□□ -1.32
SCN8A-201ENST00000354534 SEC61GP60059 68 aa6.81□□□□□ -1.32
SCN8A-201ENST00000354534 A0A087WWC5 75 aa6.81□□□□□ -1.32
SCN8A-201ENST00000354534 MESP2Q0VG99 397 aa6.81□□□□□ -1.32
SCN8A-201ENST00000354534 TMEM170AQ8WVE7 144 aa6.81□□□□□ -1.32
SCN8A-201ENST00000354534 IGHG4P01861 327 aa6.81□□□□□ -1.32
SCN8A-201ENST00000354534 SRD5A1P18405 259 aa6.81□□□□□ -1.32
SCN8A-201ENST00000354534 UCP2P55851 309 aa6.81□□□□□ -1.32
SCN8A-201ENST00000354534 TCF19Q9Y242 345 aa6.81□□□□□ -1.32
SCN8A-201ENST00000354534 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.81□□□□□ -1.32
SCN8A-201ENST00000354534 C2CD4DB7Z1M9 353 aa6.81□□□□□ -1.32
SCN8A-201ENST00000354534 TFF3Q07654 80 aa6.81□□□□□ -1.32
SCN8A-201ENST00000354534 TMEM144Q7Z5S9 345 aa6.8□□□□□ -1.32
SCN8A-201ENST00000354534 NPDC1Q9NQX5 325 aaPredicted RBP6.8□□□□□ -1.32
SCN8A-201ENST00000354534 CEACAM8P31997 349 aaPredicted RBP6.8□□□□□ -1.32
SCN8A-201ENST00000354534 GNG5P63218 68 aa6.8□□□□□ -1.32
SCN8A-201ENST00000354534 TSSC4Q9Y5U2 329 aaPredicted RBP6.8□□□□□ -1.32
SCN8A-201ENST00000354534 ANXA2RQ3ZCQ2 193 aa6.8□□□□□ -1.32
SCN8A-201ENST00000354534 APOBEC4Q8WW27 367 aaKnown RBP6.8□□□□□ -1.32
SCN8A-201ENST00000354534 GNB1LQ9BYB4 327 aa6.8□□□□□ -1.32
SCN8A-201ENST00000354534 A0A1W2PQD3 144 aa6.8□□□□□ -1.32
SCN8A-201ENST00000354534 LHBP01229 141 aa6.8□□□□□ -1.32
SCN8A-201ENST00000354534 C14orf132Q9NPU4 83 aa6.8□□□□□ -1.32
SCN8A-201ENST00000354534 NHSQ6T4R5 1651 aa6.8□□□□□ -1.32
SCN8A-201ENST00000354534 ANK1P16157 1881 aa6.8□□□□□ -1.32
SCN8A-201ENST00000354534 ZNF826PQ6ZT77 177 aa6.8□□□□□ -1.32
SCN8A-201ENST00000354534 SPTSSBQ8NFR3 76 aa6.8□□□□□ -1.32
SCN8A-201ENST00000354534 CRIM1Q9NZV1 1036 aa6.8□□□□□ -1.32
SCN8A-201ENST00000354534 PHF3Q92576 2039 aaKnown RBP6.8□□□□□ -1.32
SCN8A-201ENST00000354534 ZXDCQ2QGD7 858 aaPredicted RBP6.8□□□□□ -1.32
SCN8A-201ENST00000354534 PLEKHB2Q96CS7 222 aa6.8□□□□□ -1.32
SCN8A-201ENST00000354534 C8orf31Q8N9H6 132 aa6.8□□□□□ -1.32
SCN8A-201ENST00000354534 CT62P0C5K7 136 aa6.8□□□□□ -1.32
SCN8A-201ENST00000354534 H2BFSP57053 126 aa6.8□□□□□ -1.32
SCN8A-201ENST00000354534 CCL19Q99731 98 aa6.8□□□□□ -1.32
SCN8A-201ENST00000354534 MSRB3Q8IXL7 192 aa6.79□□□□□ -1.32
SCN8A-201ENST00000354534 SAXO1Q8IYX7 474 aa6.79□□□□□ -1.32
SCN8A-201ENST00000354534 ITLN1Q8WWA0 313 aa6.79□□□□□ -1.32
SCN8A-201ENST00000354534 RCC1LQ96I51 464 aaKnown RBP6.79□□□□□ -1.32
SCN8A-201ENST00000354534 IGLV3-16A0A075B6K0 115 aa6.79□□□□□ -1.32
SCN8A-201ENST00000354534 ASCL2Q99929 193 aa6.79□□□□□ -1.32
SCN8A-201ENST00000354534 GAS1P54826 345 aa6.79□□□□□ -1.32
SCN8A-201ENST00000354534 FXYD7P58549 80 aa6.79□□□□□ -1.32
SCN8A-201ENST00000354534 ERCC8Q13216 396 aa6.79□□□□□ -1.32
SCN8A-201ENST00000354534 GPBAR1Q8TDU6 330 aa6.79□□□□□ -1.32
SCN8A-201ENST00000354534 CT55Q8WUE5 264 aa6.79□□□□□ -1.32
SCN8A-201ENST00000354534 RASL10AQ92737 203 aa6.79□□□□□ -1.32
SCN8A-201ENST00000354534 NCKAP5O14513 1909 aa6.79□□□□□ -1.32
SCN8A-201ENST00000354534 SCARF2Q96GP6 870 aaPredicted RBP6.79□□□□□ -1.32
SCN8A-201ENST00000354534 PLXNB2O15031 1838 aa6.79□□□□□ -1.32
SCN8A-201ENST00000354534 TEX43Q6ZNM6 134 aa6.79□□□□□ -1.32
SCN8A-201ENST00000354534 ZNF474Q6S9Z5 364 aaPredicted RBP6.79□□□□□ -1.32
SCN8A-201ENST00000354534 Q6ZS52 159 aa6.79□□□□□ -1.32
SCN8A-201ENST00000354534 MRPL55Q7Z7F7 128 aaKnown RBP6.79□□□□□ -1.32
SCN8A-201ENST00000354534 MARF1Q9Y4F3 1742 aaKnown RBP6.79□□□□□ -1.32
SCN8A-201ENST00000354534 APOBEC3AP31941 199 aaPredicted RBP6.79□□□□□ -1.32
SCN8A-201ENST00000354534 C5orf66Q9H5L9 145 aa6.79□□□□□ -1.32
SCN8A-201ENST00000354534 QSER1Q2KHR3 1735 aa6.79□□□□□ -1.32
SCN8A-201ENST00000354534 KIAA1551Q9HCM1 1747 aa6.79□□□□□ -1.32
SCN8A-201ENST00000354534 A0A1W2PPC1 479 aa6.79□□□□□ -1.32
SCN8A-201ENST00000354534 FSTP19883 344 aa6.79□□□□□ -1.32
SCN8A-201ENST00000354534 TRIP6Q15654 476 aaKnown RBP6.79□□□□□ -1.32
SCN8A-201ENST00000354534 THAP8Q8NA92 274 aa6.79□□□□□ -1.32
SCN8A-201ENST00000354534 PEMTQ9UBM1 199 aa6.79□□□□□ -1.32
SCN8A-201ENST00000354534 ARPC1AQ92747 370 aa6.79□□□□□ -1.32
SCN8A-201ENST00000354534 A0A1B0GTL3 188 aa6.78□□□□□ -1.32
SCN8A-201ENST00000354534 AHRRA9YTQ3 701 aa6.78□□□□□ -1.32
SCN8A-201ENST00000354534 RPL23P62829 140 aaKnown RBP6.78□□□□□ -1.32
SCN8A-201ENST00000354534 C3orf36Q3SXR2 165 aa6.78□□□□□ -1.32
SCN8A-201ENST00000354534 ZFP36L2P47974 494 aaKnown RBP6.78□□□□□ -1.32
SCN8A-201ENST00000354534 TMEM30BQ3MIR4 351 aa6.78□□□□□ -1.32
SCN8A-201ENST00000354534 FBXL7Q9UJT9 491 aa6.78□□□□□ -1.32
SCN8A-201ENST00000354534 UBE2CO00762 179 aa6.78□□□□□ -1.32
SCN8A-201ENST00000354534 IGHG2P01859 326 aa6.78□□□□□ -1.32
SCN8A-201ENST00000354534 MORN5Q5VZ52 161 aa6.78□□□□□ -1.32
SCN8A-201ENST00000354534 B5MCH6 92 aa6.78□□□□□ -1.32
SCN8A-201ENST00000354534 PRSS23O95084 383 aa6.78□□□□□ -1.32
SCN8A-201ENST00000354534 PDLIM4P50479 330 aa6.78□□□□□ -1.32
SCN8A-201ENST00000354534 SPXQ9BT56 116 aa6.78□□□□□ -1.32
SCN8A-201ENST00000354534 A0A1W2PRE2 83 aa6.78□□□□□ -1.32
SCN8A-201ENST00000354534 SRP19P09132 144 aaKnown RBP6.78□□□□□ -1.32
SCN8A-201ENST00000354534 TM4SF4P48230 202 aa6.78□□□□□ -1.32
SCN8A-201ENST00000354534 ZNF236Q9UL36 1845 aa6.78□□□□□ -1.32
SCN8A-201ENST00000354534 F2Z2F3 143 aa6.78□□□□□ -1.32
SCN8A-201ENST00000354534 IFNL4K9M1U5 179 aa6.78□□□□□ -1.32
SCN8A-201ENST00000354534 HOXB1P14653 301 aaPredicted RBP6.78□□□□□ -1.32
SCN8A-201ENST00000354534 MIR17HGQ75NE6 70 aa6.78□□□□□ -1.32
SCN8A-201ENST00000354534 ATG4DQ86TL0 474 aaPredicted RBP6.78□□□□□ -1.32
SCN8A-201ENST00000354534 KCNK17Q96T54 332 aa6.78□□□□□ -1.32
SCN8A-201ENST00000354534 DLL3Q9NYJ7 618 aa6.78□□□□□ -1.32
SCN8A-201ENST00000354534 AZU1P20160 251 aa6.78□□□□□ -1.32
SCN8A-201ENST00000354534 TMEM54Q969K7 222 aa6.78□□□□□ -1.32
SCN8A-201ENST00000354534 IQCF6A8MYZ5 107 aa6.77□□□□□ -1.32
SCN8A-201ENST00000354534 RASL10BQ96S79 203 aa6.77□□□□□ -1.32
SCN8A-201ENST00000354534 HIST1H2BLQ99880 126 aa6.77□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms