RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 HIST1H2BCP62807 126 aa12.46□□□□□ -0.41
MBD1-205ENST00000353909 HIST2H2BEQ16778 126 aa12.46□□□□□ -0.41
MBD1-205ENST00000353909 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.46□□□□□ -0.41
MBD1-205ENST00000353909 LHFPL4Q7Z7J7 247 aa12.46□□□□□ -0.41
MBD1-205ENST00000353909 CACNG8Q8WXS5 425 aa12.46□□□□□ -0.41
MBD1-205ENST00000353909 HIST1H2BHQ93079 126 aa12.46□□□□□ -0.41
MBD1-205ENST00000353909 UHRF2Q96PU4 802 aa12.46□□□□□ -0.41
MBD1-205ENST00000353909 HIST1H2BNQ99877 126 aa12.46□□□□□ -0.41
MBD1-205ENST00000353909 HIST1H2BMQ99879 126 aa12.46□□□□□ -0.41
MBD1-205ENST00000353909 METTL1Q9UBP6 276 aaKnown RBP12.46□□□□□ -0.41
MBD1-205ENST00000353909 CELSR2Q9HCU4 2923 aa12.46□□□□□ -0.42
MBD1-205ENST00000353909 LY6LH3BQJ8 138 aa12.46□□□□□ -0.42
MBD1-205ENST00000353909 SNRPCP09234 159 aaKnown RBP12.46□□□□□ -0.42
MBD1-205ENST00000353909 GNLYP22749 145 aa12.46□□□□□ -0.42
MBD1-205ENST00000353909 PSMB11A5LHX3 300 aa12.45□□□□□ -0.42
MBD1-205ENST00000353909 OR7C2O60412 319 aa12.45□□□□□ -0.42
MBD1-205ENST00000353909 S100A12P80511 92 aa12.45□□□□□ -0.42
MBD1-205ENST00000353909 FRZBQ92765 325 aa12.45□□□□□ -0.42
MBD1-205ENST00000353909 TIMD4Q96H15 378 aa12.45□□□□□ -0.42
MBD1-205ENST00000353909 AP4M1O00189 453 aa12.45□□□□□ -0.42
MBD1-205ENST00000353909 TIMM23O14925 209 aa12.45□□□□□ -0.42
MBD1-205ENST00000353909 GPX4P36969 197 aaPredicted RBP12.45□□□□□ -0.42
MBD1-205ENST00000353909 GALR1P47211 349 aa12.45□□□□□ -0.42
MBD1-205ENST00000353909 PPP1R27Q86WC6 154 aa12.45□□□□□ -0.42
MBD1-205ENST00000353909 TEX45Q8NA69 505 aa12.45□□□□□ -0.42
MBD1-205ENST00000353909 MISP3Q96FF7 219 aa12.45□□□□□ -0.42
MBD1-205ENST00000353909 MYO18BQ8IUG5 2567 aa12.45□□□□□ -0.42
MBD1-205ENST00000353909 TRBV24-1A0A075B6N3 115 aa12.44□□□□□ -0.42
MBD1-205ENST00000353909 CLN5O75503 358 aa12.44□□□□□ -0.42
MBD1-205ENST00000353909 RPL27AP46776 148 aaKnown RBP12.44□□□□□ -0.42
MBD1-205ENST00000353909 ZNF600Q6ZNG1 722 aa12.44□□□□□ -0.42
MBD1-205ENST00000353909 MMD2Q8IY49 270 aa12.44□□□□□ -0.42
MBD1-205ENST00000353909 NANPQ8TBE9 248 aa12.44□□□□□ -0.42
MBD1-205ENST00000353909 F6UZH7 168 aa12.44□□□□□ -0.42
MBD1-205ENST00000353909 VENTXO95231 258 aa12.44□□□□□ -0.42
MBD1-205ENST00000353909 MOSP00540 346 aa12.44□□□□□ -0.42
MBD1-205ENST00000353909 NDUFA6P56556 154 aa12.44□□□□□ -0.42
MBD1-205ENST00000353909 FAM209BQ5JX69 171 aa12.44□□□□□ -0.42
MBD1-205ENST00000353909 DTX2Q86UW9 622 aa12.44□□□□□ -0.42
MBD1-205ENST00000353909 RNASEH2CQ8TDP1 164 aaKnown RBP12.44□□□□□ -0.42
MBD1-205ENST00000353909 ITLN2Q8WWU7 325 aaPredicted RBP12.44□□□□□ -0.42
MBD1-205ENST00000353909 SLC25A33Q9BSK2 321 aa12.44□□□□□ -0.42
MBD1-205ENST00000353909 SSBP3Q9BWW4 388 aaPredicted RBP12.44□□□□□ -0.42
MBD1-205ENST00000353909 DMRT1Q9Y5R6 373 aa12.44□□□□□ -0.42
MBD1-205ENST00000353909 A0A1W2PPQ1 181 aa12.43□□□□□ -0.42
MBD1-205ENST00000353909 RBP4P02753 201 aa12.43□□□□□ -0.42
MBD1-205ENST00000353909 OR5G3P0C626 314 aa12.43□□□□□ -0.42
MBD1-205ENST00000353909 COMPP49747 757 aaPredicted RBP12.43□□□□□ -0.42
MBD1-205ENST00000353909 PATE2Q6UY27 113 aa12.43□□□□□ -0.42
MBD1-205ENST00000353909 OCC1Q8TAD7 63 aa12.43□□□□□ -0.42
MBD1-205ENST00000353909 GSX1Q9H4S2 264 aaPredicted RBP12.43□□□□□ -0.42
MBD1-205ENST00000353909 PHOX2AO14813 284 aa12.43□□□□□ -0.42
MBD1-205ENST00000353909 ZFP36P26651 326 aaKnown RBP12.43□□□□□ -0.42
MBD1-205ENST00000353909 FAM3BP58499 235 aaPredicted RBP12.43□□□□□ -0.42
MBD1-205ENST00000353909 CHODLQ9H9P2 273 aa12.43□□□□□ -0.42
MBD1-205ENST00000353909 UBTD1Q9HAC8 227 aa12.43□□□□□ -0.42
MBD1-205ENST00000353909 LOC105371242A0A075B767 164 aa12.43□□□□□ -0.42
MBD1-205ENST00000353909 TEX22C9J3V5 150 aa12.43□□□□□ -0.42
MBD1-205ENST00000353909 NDUFS6O75380 124 aaKnown RBP12.43□□□□□ -0.42
MBD1-205ENST00000353909 TRGC1P0CF51 173 aa12.43□□□□□ -0.42
MBD1-205ENST00000353909 SUB1P53999 127 aaKnown RBP eCLIP12.43□□□□□ -0.42
MBD1-205ENST00000353909 GFI1BQ5VTD9 330 aa12.43□□□□□ -0.42
MBD1-205ENST00000353909 NEU4Q8WWR8 484 aaPredicted RBP12.43□□□□□ -0.42
MBD1-205ENST00000353909 FAM167A-AS1Q96KT0 104 aa12.43□□□□□ -0.42
MBD1-205ENST00000353909 TECRQ9NZ01 308 aaKnown RBP12.43□□□□□ -0.42
MBD1-205ENST00000353909 IFITM10A6NMD0 228 aa12.42□□□□□ -0.42
MBD1-205ENST00000353909 GGTLC3B5MD39 225 aa12.42□□□□□ -0.42
MBD1-205ENST00000353909 MT-CO2P00403 227 aa12.42□□□□□ -0.42
MBD1-205ENST00000353909 PYYP10082 97 aa12.42□□□□□ -0.42
MBD1-205ENST00000353909 HTR1DP28221 377 aa12.42□□□□□ -0.42
MBD1-205ENST00000353909 MEOX2P50222 304 aa12.42□□□□□ -0.42
MBD1-205ENST00000353909 TPTE2P1Q5T6R2 138 aa12.42□□□□□ -0.42
MBD1-205ENST00000353909 SLC25A2Q9BXI2 301 aa12.42□□□□□ -0.42
MBD1-205ENST00000353909 CSMD2Q7Z408 3487 aa12.41□□□□□ -0.42
MBD1-205ENST00000353909 K7EN84 100 aa12.41□□□□□ -0.42
MBD1-205ENST00000353909 CRYBB3P26998 211 aa12.41□□□□□ -0.42
MBD1-205ENST00000353909 PYGO2Q9BRQ0 406 aa12.41□□□□□ -0.42
MBD1-205ENST00000353909 DNAJC4Q9NNZ3 241 aa12.41□□□□□ -0.42
MBD1-205ENST00000353909 TCRBV4S1A1TA0A5B7 111 aa12.41□□□□□ -0.42
MBD1-205ENST00000353909 OR11H6Q8NGC7 330 aa12.41□□□□□ -0.42
MBD1-205ENST00000353909 OR4X1Q8NH49 305 aa12.41□□□□□ -0.42
MBD1-205ENST00000353909 SRSF12Q8WXF0 261 aaKnown RBP12.41□□□□□ -0.42
MBD1-205ENST00000353909 OR5B12Q96R08 314 aa12.41□□□□□ -0.42
MBD1-205ENST00000353909 C8orf88P0DMB2 117 aa12.4□□□□□ -0.42
MBD1-205ENST00000353909 PLGLAQ15195 96 aa12.4□□□□□ -0.42
MBD1-205ENST00000353909 MMDQ15546 238 aa12.4□□□□□ -0.42
MBD1-205ENST00000353909 DYNAPQ8N1N2 210 aa12.4□□□□□ -0.42
MBD1-205ENST00000353909 ANAPC16Q96DE5 110 aa12.4□□□□□ -0.42
MBD1-205ENST00000353909 TXNDC17Q9BRA2 123 aa12.4□□□□□ -0.42
MBD1-205ENST00000353909 FAM103A1Q9BTL3 118 aaKnown RBP12.4□□□□□ -0.42
MBD1-205ENST00000353909 ZNF355PQ9NSJ1 428 aa12.4□□□□□ -0.42
MBD1-205ENST00000353909 DPM3Q9P2X0 92 aa12.4□□□□□ -0.42
MBD1-205ENST00000353909 AMMECR1Q9Y4X0 333 aaPredicted RBP12.4□□□□□ -0.42
MBD1-205ENST00000353909 LINC00587B1AMM8 73 aa12.4□□□□□ -0.42
MBD1-205ENST00000353909 CRYGCP07315 174 aa12.4□□□□□ -0.42
MBD1-205ENST00000353909 SUMO1P63165 101 aaKnown RBP12.4□□□□□ -0.42
MBD1-205ENST00000353909 SSX2Q16385 188 aa12.4□□□□□ -0.42
MBD1-205ENST00000353909 PDZD11Q5EBL8 140 aa12.4□□□□□ -0.42
MBD1-205ENST00000353909 THAP8Q8NA92 274 aa12.4□□□□□ -0.42
MBD1-205ENST00000353909 OR5AU1Q8NGC0 362 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms