RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 TEX38Q6PEX7 206 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 MIR17HGQ75NE6 70 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 MOB3BQ86TA1 216 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 MRPL52Q86TS9 123 aaKnown RBP3.02□□□□□ -1.93
RNF38-203ENST00000353739 NECAP1Q8NC96 275 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 ST6GALNAC6Q969X2 333 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 HIGD1AQ9Y241 93 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 IGHV1-3A0A0C4DH29 117 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.02□□□□□ -1.93
RNF38-203ENST00000353739 K7EM74 188 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 HYPMO75409 117 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 HLA-DQA1P01909 254 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 HIST1H1EP10412 219 aaKnown RBP3.02□□□□□ -1.93
RNF38-203ENST00000353739 SELLP14151 372 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 HIST1H1BP16401 226 aaKnown RBP3.02□□□□□ -1.93
RNF38-203ENST00000353739 USF2Q15853 346 aaPredicted RBP3.02□□□□□ -1.93
RNF38-203ENST00000353739 OR10J3Q5JRS4 329 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 ATP5L2Q7Z4Y8 100 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 SLC25A33Q9BSK2 321 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 SCNM1Q9BWG6 230 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 SLC25A2Q9BXI2 301 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 FAM90A27PA6NNH2 459 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 H0Y8G0 127 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 CRYGBP07316 175 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 CCL3L1P16619 93 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 CT83Q5H943 113 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 TPTE2P1Q5T6R2 138 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 FAM53AQ6NSI3 398 aaPredicted RBP3.01□□□□□ -1.93
RNF38-203ENST00000353739 NPBQ8NG41 125 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 OR11H6Q8NGC7 330 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 OR10D4PQ8NGN7 298 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 ZNF48Q96MX3 618 aaPredicted RBP3.01□□□□□ -1.93
RNF38-203ENST00000353739 ONECUT1Q9UBC0 465 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 TBL2Q9Y4P3 447 aaKnown RBP3.01□□□□□ -1.93
RNF38-203ENST00000353739 F11RQ9Y624 299 aaKnown RBP3.01□□□□□ -1.93
RNF38-203ENST00000353739 IZUMO1RA6ND01 250 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 FABP4P15090 132 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 RPL15P61313 204 aaKnown RBP3.01□□□□□ -1.93
RNF38-203ENST00000353739 COTL1Q14019 142 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 LBHQ53QV2 105 aaPredicted RBP3.01□□□□□ -1.93
RNF38-203ENST00000353739 CENPWQ5EE01 88 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 DUX4L9Q6RFH8 374 aaPredicted RBP3.01□□□□□ -1.93
RNF38-203ENST00000353739 TOMM20LQ6UXN7 152 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 LYPD1Q8N2G4 141 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 LY6G5BQ8NDX9 201 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 OR5AU1Q8NGC0 362 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 OR4B1Q8NGF8 309 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 SGMS2Q8NHU3 365 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 WIPF2Q8TF74 440 aaPredicted RBP3.01□□□□□ -1.93
RNF38-203ENST00000353739 IGFBPL1Q8WX77 278 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 TMEM68Q96MH6 324 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 GFRA4Q9GZZ7 299 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 OTORQ9NRC9 128 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 TNFRSF19Q9NS68 423 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 THYN1Q9P016 225 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 ZNF492Q9P255 531 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 CUL9Q8IWT3 2517 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 ANKRD11Q6UB99 2663 aaPredicted RBP3.01□□□□□ -1.93
RNF38-203ENST00000353739 A0A1B0GW15 77 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 MOSP00540 346 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 IGKV1-16P04430 117 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 CRYGCP07315 174 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 HTR1DP28221 377 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 LGALS4P56470 323 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 LYPD2Q6UXB3 125 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 TMEM116Q8NCL8 245 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 MISP3Q96FF7 219 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 TXN2Q99757 166 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 SSBP3Q9BWW4 388 aaPredicted RBP3.01□□□□□ -1.93
RNF38-203ENST00000353739 SEPSECSQ9HD40 501 aaKnown RBP3.01□□□□□ -1.93
RNF38-203ENST00000353739 ZNF331Q9NQX6 463 aaPredicted RBP3.01□□□□□ -1.93
RNF38-203ENST00000353739 GSN-AS1Q9NRJ2 163 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 C1RLQ9NZP8 487 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 CTSZQ9UBR2 303 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 LOC105371242A0A075B767 164 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 TMEM8BA6NDV4 472 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 PEX7O00628 323 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 PHOX2AO14813 284 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 SLC25A17O43808 307 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 KALRNO60229 2985 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 IGHV3-7P01780 117 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 Q0VG73 95 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 JOSD1Q15040 202 aaPredicted RBP3.01□□□□□ -1.93
RNF38-203ENST00000353739 TMEM183BQ1AE95 376 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 GCSAMLQ5JQS6 135 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 IBA57Q5T440 356 aaKnown RBP3.01□□□□□ -1.93
RNF38-203ENST00000353739 C1orf229Q6ZS94 237 aaPredicted RBP3.01□□□□□ -1.93
RNF38-203ENST00000353739 ZNF329Q86UD4 541 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 PPP1R27Q86WC6 154 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 GBGT1Q8N5D6 347 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 C5orf17Q8NAS9 161 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 OR5T1Q8NG75 326 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 OR4F17Q8NGA8 305 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 CMTM2Q8TAZ6 248 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 IGF2BP2-AS1Q96M15 143 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 RASL11BQ9BPW5 248 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 DPM3Q9P2X0 92 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 NAT8BQ9UHF3 227 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 SIGLEC9Q9Y336 463 aa3.01□□□□□ -1.93
RNF38-203ENST00000353739 ZFHX2Q9C0A1 2572 aaPredicted RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms