RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 PAM16Q9Y3D7 125 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 V9GYV3 84 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 IGHV1-69-2A0A0G2JMI3 117 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 ACTL6BO94805 426 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 NPY1RP25929 384 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 COMPP49747 757 aaPredicted RBP6.97□□□□□ -1.29
TRIM55-204ENST00000353317 RANP62826 216 aaKnown RBP6.97□□□□□ -1.29
TRIM55-204ENST00000353317 PRR20EP86478 221 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 PRR20CP86479 221 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 PRR20DP86480 221 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 PRR20BP86481 221 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 PRR20AP86496 221 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 C17orf58Q2M2W7 97 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 CR1LQ2VPA4 569 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 MIR17HGQ75NE6 70 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 BAGE3Q86Y29 109 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 BAGE2Q86Y30 109 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 OR8I2Q8N0Y5 310 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 OR5AU1Q8NGC0 362 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 VN1R17PQ8TDU5 208 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 C20orf144Q9BQM9 153 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 RNF114Q9Y508 228 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 F2RL2O00254 374 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 MGST3O14880 152 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 SPINK4O60575 86 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 CA2P00918 260 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 IRF2P14316 349 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 ZNF25P17030 456 aaPredicted RBP6.97□□□□□ -1.29
TRIM55-204ENST00000353317 Q0VG73 95 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 RPEL1Q2QD12 228 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 OR4A47Q6IF82 309 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 LY96Q9Y6Y9 160 aa6.97□□□□□ -1.29
TRIM55-204ENST00000353317 HELZ2Q9BYK8 2649 aaKnown RBP6.96□□□□□ -1.29
TRIM55-204ENST00000353317 PTPN13Q12923 2485 aa6.96□□□□□ -1.29
TRIM55-204ENST00000353317 DOPEY2Q9Y3R5 2298 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 PPIAL4EA0A075B759 164 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 A6NNC1 897 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 VSTM5A8MXK1 200 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 PPIAL4DF5H284 164 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 LINC00869P0C866 280 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 PPIAL4FP0DN26 164 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 CRYBB3P26998 211 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 CENPWQ5EE01 88 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 CYB5R2Q6BCY4 276 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 MOB3BQ86TA1 216 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 OR4S2Q8NH73 311 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 UHRF2Q96PU4 802 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 MIEN1Q9BRT3 115 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 SAMD10Q9BYL1 202 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 TMEM14BQ9NUH8 114 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 PPIAL4AQ9Y536 164 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 ABCA12Q86UK0 2595 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 SAA2-SAA4A0A096LPE2 208 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 HELTA6NFD8 242 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 MT-CO2P00403 227 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 SAA2P0DJI9 122 aaPredicted RBP6.96□□□□□ -1.3
TRIM55-204ENST00000353317 AREGP15514 252 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 HSPE1P61604 102 aaKnown RBP6.96□□□□□ -1.3
TRIM55-204ENST00000353317 SLC35B1P78383 322 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 PSG5Q15238 335 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 TMEM183BQ1AE95 376 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 CT45A1Q5HYN5 189 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 PQLC2Q6ZP29 291 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 CT45A3Q8NHU0 189 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 FAM216AQ8WUB2 273 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 ZNF503Q96F45 646 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 RNASE7Q9H1E1 156 aaKnown RBP6.96□□□□□ -1.3
TRIM55-204ENST00000353317 GNB4Q9HAV0 340 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 CALYQ9NYX4 217 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 ZNRD1Q9P1U0 126 aa6.96□□□□□ -1.3
TRIM55-204ENST00000353317 FOXA2Q9Y261 457 aaPredicted RBP6.96□□□□□ -1.3
TRIM55-204ENST00000353317 IGKV1OR2-108A0A075B7D4 117 aa6.95□□□□□ -1.3
TRIM55-204ENST00000353317 GNG4P50150 75 aa6.95□□□□□ -1.3
TRIM55-204ENST00000353317 DLX1P56177 255 aa6.95□□□□□ -1.3
TRIM55-204ENST00000353317 RAB31Q13636 194 aa6.95□□□□□ -1.3
TRIM55-204ENST00000353317 TMEM68Q96MH6 324 aa6.95□□□□□ -1.3
TRIM55-204ENST00000353317 FAM103A1Q9BTL3 118 aaKnown RBP6.95□□□□□ -1.3
TRIM55-204ENST00000353317 TMEM208Q9BTX3 173 aa6.95□□□□□ -1.3
TRIM55-204ENST00000353317 VAMP8Q9BV40 100 aa6.95□□□□□ -1.3
TRIM55-204ENST00000353317 HINT2Q9BX68 163 aa6.95□□□□□ -1.3
TRIM55-204ENST00000353317 GNB1LQ9BYB4 327 aa6.95□□□□□ -1.3
TRIM55-204ENST00000353317 IDI2-AS1Q9NZ38 188 aa6.95□□□□□ -1.3
TRIM55-204ENST00000353317 FBXL7Q9UJT9 491 aa6.95□□□□□ -1.3
TRIM55-204ENST00000353317 M0QZK8 103 aa6.95□□□□□ -1.3
TRIM55-204ENST00000353317 RPLP1P05386 114 aaKnown RBP6.95□□□□□ -1.3
TRIM55-204ENST00000353317 GPX1P07203 203 aa6.95□□□□□ -1.3
TRIM55-204ENST00000353317 GATA2P23769 480 aaPredicted RBP6.95□□□□□ -1.3
TRIM55-204ENST00000353317 KIR2DS2P43631 304 aa6.95□□□□□ -1.3
TRIM55-204ENST00000353317 CX3CL1P78423 397 aa6.95□□□□□ -1.3
TRIM55-204ENST00000353317 FXYD3Q14802 87 aa6.95□□□□□ -1.3
TRIM55-204ENST00000353317 KIAA1644Q3SXP7 199 aa6.95□□□□□ -1.3
TRIM55-204ENST00000353317 DTX2Q86UW9 622 aa6.95□□□□□ -1.3
TRIM55-204ENST00000353317 NABP2Q9BQ15 211 aa6.95□□□□□ -1.3
TRIM55-204ENST00000353317 UBTD1Q9HAC8 227 aa6.95□□□□□ -1.3
TRIM55-204ENST00000353317 NAT8BQ9UHF3 227 aa6.95□□□□□ -1.3
TRIM55-204ENST00000353317 ABCA2Q9BZC7 2435 aa6.94□□□□□ -1.3
TRIM55-204ENST00000353317 TRBV9A0A0B4J1U6 114 aa6.94□□□□□ -1.3
TRIM55-204ENST00000353317 GGTLC3B5MD39 225 aa6.94□□□□□ -1.3
TRIM55-204ENST00000353317 CCL3L1P16619 93 aa6.94□□□□□ -1.3
TRIM55-204ENST00000353317 BRS3P32247 399 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms