RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 ALKBH4Q9NXW9 302 aa8.75□□□□□ -1.01
CAPN3-203ENST00000349748 CACNA1HO95180 2353 aa8.75□□□□□ -1.01
CAPN3-203ENST00000349748 ZNF137PP52743 207 aa8.74□□□□□ -1.01
CAPN3-203ENST00000349748 TAS2R45P59539 299 aa8.74□□□□□ -1.01
CAPN3-203ENST00000349748 EFNB3Q15768 340 aa8.74□□□□□ -1.01
CAPN3-203ENST00000349748 HLA-DQA1Q5Y7H0 255 aa8.74□□□□□ -1.01
CAPN3-203ENST00000349748 ANKRD37Q7Z713 158 aa8.74□□□□□ -1.01
CAPN3-203ENST00000349748 CHCHD1Q96BP2 118 aaKnown RBP8.74□□□□□ -1.01
CAPN3-203ENST00000349748 SNRNP40Q96DI7 357 aaKnown RBP8.74□□□□□ -1.01
CAPN3-203ENST00000349748 GRAMD2BQ96HH9 432 aa8.74□□□□□ -1.01
CAPN3-203ENST00000349748 YAE1D1Q9NRH1 226 aa8.74□□□□□ -1.01
CAPN3-203ENST00000349748 TMEM131Q92545 1883 aa8.74□□□□□ -1.01
CAPN3-203ENST00000349748 A0A1W2PQD3 144 aa8.74□□□□□ -1.01
CAPN3-203ENST00000349748 K7ESF4 209 aa8.74□□□□□ -1.01
CAPN3-203ENST00000349748 MYF5P13349 255 aa8.74□□□□□ -1.01
CAPN3-203ENST00000349748 NMUP48645 174 aa8.74□□□□□ -1.01
CAPN3-203ENST00000349748 PSG5Q15238 335 aa8.74□□□□□ -1.01
CAPN3-203ENST00000349748 FAM214BQ7L5A3 538 aa8.74□□□□□ -1.01
CAPN3-203ENST00000349748 PPP1R32Q7Z5V6 425 aa8.74□□□□□ -1.01
CAPN3-203ENST00000349748 ZNF645Q8N7E2 425 aa8.74□□□□□ -1.01
CAPN3-203ENST00000349748 TMUB1Q9BVT8 246 aa8.74□□□□□ -1.01
CAPN3-203ENST00000349748 IDI2-AS1Q9NZ38 188 aa8.74□□□□□ -1.01
CAPN3-203ENST00000349748 DUSP13Q9UII6 198 aa8.74□□□□□ -1.01
CAPN3-203ENST00000349748 CABIN1Q9Y6J0 2220 aa8.74□□□□□ -1.01
CAPN3-203ENST00000349748 A0A1W2PPC4 97 aa8.73□□□□□ -1.01
CAPN3-203ENST00000349748 OPRK1P41145 380 aa8.73□□□□□ -1.01
CAPN3-203ENST00000349748 Q6ZSR3 168 aa8.73□□□□□ -1.01
CAPN3-203ENST00000349748 MIR17HGQ75NE6 70 aa8.73□□□□□ -1.01
CAPN3-203ENST00000349748 TMEM54Q969K7 222 aa8.73□□□□□ -1.01
CAPN3-203ENST00000349748 USF3Q68DE3 2245 aa8.73□□□□□ -1.01
CAPN3-203ENST00000349748 HEATR1Q9H583 2144 aaKnown RBP8.73□□□□□ -1.01
CAPN3-203ENST00000349748 PIGBOS1A0A0B4J2F0 54 aa8.73□□□□□ -1.01
CAPN3-203ENST00000349748 hCG_38984A0A1B0GV85 526 aa8.73□□□□□ -1.01
CAPN3-203ENST00000349748 NPIPB5A8MRT5 1133 aa8.73□□□□□ -1.01
CAPN3-203ENST00000349748 GGTLC3B5MD39 225 aa8.73□□□□□ -1.01
CAPN3-203ENST00000349748 ZNHIT1O43257 154 aa8.73□□□□□ -1.01
CAPN3-203ENST00000349748 OR5AL1P0C617 328 aa8.73□□□□□ -1.01
CAPN3-203ENST00000349748 RASL11AQ6T310 242 aa8.73□□□□□ -1.01
CAPN3-203ENST00000349748 BCL6BQ8N143 479 aaPredicted RBP8.73□□□□□ -1.01
CAPN3-203ENST00000349748 PIP4P2Q8N4L2 257 aa8.73□□□□□ -1.01
CAPN3-203ENST00000349748 DPF1Q92782 380 aa8.73□□□□□ -1.01
CAPN3-203ENST00000349748 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.73□□□□□ -1.01
CAPN3-203ENST00000349748 A0A1B0GWB2 263 aa8.73□□□□□ -1.01
CAPN3-203ENST00000349748 APOMO95445 188 aa8.73□□□□□ -1.01
CAPN3-203ENST00000349748 PATE4P0C8F1 98 aa8.73□□□□□ -1.01
CAPN3-203ENST00000349748 PF4V1P10720 104 aa8.73□□□□□ -1.01
CAPN3-203ENST00000349748 DRAM1Q8N682 238 aa8.73□□□□□ -1.01
CAPN3-203ENST00000349748 SPTSSAQ969W0 71 aa8.73□□□□□ -1.01
CAPN3-203ENST00000349748 IGF2BP2-AS1Q96M15 143 aa8.73□□□□□ -1.01
CAPN3-203ENST00000349748 FSCN3Q9NQT6 498 aa8.73□□□□□ -1.01
CAPN3-203ENST00000349748 TMEM140Q9NV12 185 aa8.73□□□□□ -1.01
CAPN3-203ENST00000349748 NHP2Q9NX24 153 aaKnown RBP8.73□□□□□ -1.01
CAPN3-203ENST00000349748 PRSS29PA6NIE9 313 aa8.72□□□□□ -1.01
CAPN3-203ENST00000349748 IGKV3-11P04433 115 aa8.72□□□□□ -1.01
CAPN3-203ENST00000349748 NHLRC4P0CG21 123 aaPredicted RBP8.72□□□□□ -1.01
CAPN3-203ENST00000349748 CA6P23280 308 aa8.72□□□□□ -1.01
CAPN3-203ENST00000349748 HHEXQ03014 270 aa8.72□□□□□ -1.01
CAPN3-203ENST00000349748 GAGE13Q4V321 117 aa8.72□□□□□ -1.01
CAPN3-203ENST00000349748 TMEM105Q8N8V8 129 aa8.72□□□□□ -1.01
CAPN3-203ENST00000349748 ZNF837Q96EG3 531 aaPredicted RBP8.72□□□□□ -1.01
CAPN3-203ENST00000349748 A8MWL6 223 aa8.72□□□□□ -1.01
CAPN3-203ENST00000349748 CCDC179H3BU77 68 aa8.72□□□□□ -1.01
CAPN3-203ENST00000349748 SCGB2A1O75556 95 aa8.72□□□□□ -1.01
CAPN3-203ENST00000349748 AREGP15514 252 aa8.72□□□□□ -1.01
CAPN3-203ENST00000349748 LINC00205P59089 165 aa8.72□□□□□ -1.01
CAPN3-203ENST00000349748 ZNF808Q8N4W9 903 aaPredicted RBP8.72□□□□□ -1.01
CAPN3-203ENST00000349748 OR4X2Q8NGF9 303 aa8.72□□□□□ -1.01
CAPN3-203ENST00000349748 OR8A1Q8NGG7 326 aa8.72□□□□□ -1.01
CAPN3-203ENST00000349748 OR9G4Q8NGQ1 327 aa8.72□□□□□ -1.01
CAPN3-203ENST00000349748 HEYLQ9NQ87 328 aaPredicted RBP8.72□□□□□ -1.01
CAPN3-203ENST00000349748 IGLV3-19P01714 112 aa8.71□□□□□ -1.01
CAPN3-203ENST00000349748 CT45A6P0DMU7 189 aa8.71□□□□□ -1.01
CAPN3-203ENST00000349748 CT45A5P0DMU8 189 aa8.71□□□□□ -1.01
CAPN3-203ENST00000349748 CT45A7P0DMV0 189 aa8.71□□□□□ -1.01
CAPN3-203ENST00000349748 CD27P26842 260 aa8.71□□□□□ -1.01
CAPN3-203ENST00000349748 GPR12P47775 334 aa8.71□□□□□ -1.01
CAPN3-203ENST00000349748 RPL30P62888 115 aaKnown RBP8.71□□□□□ -1.01
CAPN3-203ENST00000349748 CT45A1Q5HYN5 189 aa8.71□□□□□ -1.01
CAPN3-203ENST00000349748 FAM162BQ5T6X4 162 aa8.71□□□□□ -1.01
CAPN3-203ENST00000349748 CT45A3Q8NHU0 189 aa8.71□□□□□ -1.01
CAPN3-203ENST00000349748 PHLDA1Q8WV24 401 aaPredicted RBP8.71□□□□□ -1.01
CAPN3-203ENST00000349748 COL25A1Q9BXS0 654 aaPredicted RBP8.71□□□□□ -1.01
CAPN3-203ENST00000349748 TTTY13Q9BZ97 58 aa8.71□□□□□ -1.01
CAPN3-203ENST00000349748 DYSFO75923 2080 aa8.71□□□□□ -1.02
CAPN3-203ENST00000349748 C16orf97H3BN30 126 aa8.71□□□□□ -1.02
CAPN3-203ENST00000349748 PRTN3P24158 256 aa8.71□□□□□ -1.02
CAPN3-203ENST00000349748 ZNF146Q15072 292 aa8.71□□□□□ -1.02
CAPN3-203ENST00000349748 TMEM42Q69YG0 159 aa8.71□□□□□ -1.02
CAPN3-203ENST00000349748 FAM53AQ6NSI3 398 aaPredicted RBP8.71□□□□□ -1.02
CAPN3-203ENST00000349748 RHBDD2Q6NTF9 364 aa8.71□□□□□ -1.02
CAPN3-203ENST00000349748 YRDCQ86U90 279 aaKnown RBP8.71□□□□□ -1.02
CAPN3-203ENST00000349748 C1orf210Q8IVY1 113 aa8.71□□□□□ -1.02
CAPN3-203ENST00000349748 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.71□□□□□ -1.02
CAPN3-203ENST00000349748 ZNF488Q96MN9 340 aa8.71□□□□□ -1.02
CAPN3-203ENST00000349748 ZNF747Q9BV97 191 aa8.71□□□□□ -1.02
CAPN3-203ENST00000349748 FOXI1Q12951 378 aa8.7□□□□□ -1.02
CAPN3-203ENST00000349748 KLRD1Q13241 179 aa8.7□□□□□ -1.02
CAPN3-203ENST00000349748 ZADH2Q8N4Q0 377 aa8.7□□□□□ -1.02
CAPN3-203ENST00000349748 NABP1Q96AH0 204 aa8.7□□□□□ -1.02
CAPN3-203ENST00000349748 C1orf159Q96HA4 380 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms