RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 B9A039 149 aa11.28□□□□□ -0.6
TRIM4-201ENST00000349062 H3BTX0 84 aa11.28□□□□□ -0.6
TRIM4-201ENST00000349062 IL6RP08887 468 aaPredicted RBP11.28□□□□□ -0.6
TRIM4-201ENST00000349062 PPIAL4GP0DN37 164 aa11.28□□□□□ -0.6
TRIM4-201ENST00000349062 RPL8P62917 257 aaKnown RBP11.28□□□□□ -0.6
TRIM4-201ENST00000349062 TEPPQ6URK8 271 aa11.28□□□□□ -0.6
TRIM4-201ENST00000349062 TCTEX1D1Q8N7M0 179 aa11.28□□□□□ -0.6
TRIM4-201ENST00000349062 UHRF2Q96PU4 802 aa11.28□□□□□ -0.6
TRIM4-201ENST00000349062 GGTLC1Q9BX51 225 aa11.28□□□□□ -0.6
TRIM4-201ENST00000349062 JKAMPQ9P055 326 aa11.28□□□□□ -0.6
TRIM4-201ENST00000349062 RPH3ALQ9UNE2 315 aa11.28□□□□□ -0.6
TRIM4-201ENST00000349062 WDR83OSQ9Y284 106 aa11.28□□□□□ -0.6
TRIM4-201ENST00000349062 DOPEY2Q9Y3R5 2298 aa11.28□□□□□ -0.6
TRIM4-201ENST00000349062 TOX4O94842 621 aa11.28□□□□□ -0.6
TRIM4-201ENST00000349062 KRTDAPP60985 99 aa11.28□□□□□ -0.6
TRIM4-201ENST00000349062 SLC35B1P78383 322 aa11.28□□□□□ -0.6
TRIM4-201ENST00000349062 NEIL1Q96FI4 390 aaPredicted RBP11.28□□□□□ -0.6
TRIM4-201ENST00000349062 DIRC2Q96SL1 478 aa11.28□□□□□ -0.6
TRIM4-201ENST00000349062 GSX1Q9H4S2 264 aaPredicted RBP11.28□□□□□ -0.6
TRIM4-201ENST00000349062 NPVFQ9HCQ7 196 aa11.28□□□□□ -0.6
TRIM4-201ENST00000349062 INSIG2Q9Y5U4 225 aa11.28□□□□□ -0.6
TRIM4-201ENST00000349062 IGSF10Q6WRI0 2623 aa11.27□□□□□ -0.6
TRIM4-201ENST00000349062 UPK2O00526 184 aa11.27□□□□□ -0.6
TRIM4-201ENST00000349062 CBLN1P23435 193 aa11.27□□□□□ -0.6
TRIM4-201ENST00000349062 KIR2DS2P43631 304 aa11.27□□□□□ -0.6
TRIM4-201ENST00000349062 MIR17HGQ75NE6 70 aa11.27□□□□□ -0.6
TRIM4-201ENST00000349062 TMEM208Q9BTX3 173 aa11.27□□□□□ -0.6
TRIM4-201ENST00000349062 H0YJW9 148 aa11.27□□□□□ -0.61
TRIM4-201ENST00000349062 PCP4P48539 62 aa11.27□□□□□ -0.61
TRIM4-201ENST00000349062 SSBP2P81877 361 aaPredicted RBP11.27□□□□□ -0.61
TRIM4-201ENST00000349062 KIR3DL3Q8N743 410 aa11.27□□□□□ -0.61
TRIM4-201ENST00000349062 ADTRPQ96IZ2 230 aa11.27□□□□□ -0.61
TRIM4-201ENST00000349062 SGK494Q96LW2 274 aa11.27□□□□□ -0.61
TRIM4-201ENST00000349062 HSPB9Q9BQS6 159 aa11.27□□□□□ -0.61
TRIM4-201ENST00000349062 OR5G3P0C626 314 aa11.27□□□□□ -0.61
TRIM4-201ENST00000349062 IGHV1-8P0DP01 117 aa11.27□□□□□ -0.61
TRIM4-201ENST00000349062 RAB31Q13636 194 aa11.27□□□□□ -0.61
TRIM4-201ENST00000349062 BEND2Q8NDZ0 799 aa11.27□□□□□ -0.61
TRIM4-201ENST00000349062 CMTM2Q8TAZ6 248 aa11.27□□□□□ -0.61
TRIM4-201ENST00000349062 ZNF430Q9H8G1 570 aaPredicted RBP11.27□□□□□ -0.61
TRIM4-201ENST00000349062 PRNDQ9UKY0 176 aa11.27□□□□□ -0.61
TRIM4-201ENST00000349062 ZNF90Q03938 601 aa11.26□□□□□ -0.61
TRIM4-201ENST00000349062 PSG5Q15238 335 aa11.26□□□□□ -0.61
TRIM4-201ENST00000349062 C3orf36Q3SXR2 165 aa11.26□□□□□ -0.61
TRIM4-201ENST00000349062 RNASEH2CQ8TDP1 164 aaKnown RBP11.26□□□□□ -0.61
TRIM4-201ENST00000349062 RPEQ96AT9 228 aa11.26□□□□□ -0.61
TRIM4-201ENST00000349062 TCF21O43680 179 aa11.26□□□□□ -0.61
TRIM4-201ENST00000349062 MOSP00540 346 aa11.26□□□□□ -0.61
TRIM4-201ENST00000349062 GBGT1Q8N5D6 347 aa11.26□□□□□ -0.61
TRIM4-201ENST00000349062 FBXL15Q9H469 300 aa11.26□□□□□ -0.61
TRIM4-201ENST00000349062 TRAV5A0A0B4J249 113 aa11.25□□□□□ -0.61
TRIM4-201ENST00000349062 MDFIC2A0A1B0GVS7 189 aa11.25□□□□□ -0.61
TRIM4-201ENST00000349062 SLC17A3O00476 420 aa11.25□□□□□ -0.61
TRIM4-201ENST00000349062 RBFOX2O43251 390 aaKnown RBP eCLIP11.25□□□□□ -0.61
TRIM4-201ENST00000349062 RPLP1P05386 114 aaKnown RBP11.25□□□□□ -0.61
TRIM4-201ENST00000349062 ERHP84090 104 aaKnown RBP11.25□□□□□ -0.61
TRIM4-201ENST00000349062 KIAA1644Q3SXP7 199 aa11.25□□□□□ -0.61
TRIM4-201ENST00000349062 BTF3L4Q96K17 158 aa11.25□□□□□ -0.61
TRIM4-201ENST00000349062 TMEM14BQ9NUH8 114 aa11.25□□□□□ -0.61
TRIM4-201ENST00000349062 CNIH1O95406 144 aa11.25□□□□□ -0.61
TRIM4-201ENST00000349062 ORM2P19652 201 aa11.25□□□□□ -0.61
TRIM4-201ENST00000349062 UCNP55089 124 aa11.25□□□□□ -0.61
TRIM4-201ENST00000349062 CR1LQ2VPA4 569 aa11.25□□□□□ -0.61
TRIM4-201ENST00000349062 ZNF114Q8NC26 417 aa11.25□□□□□ -0.61
TRIM4-201ENST00000349062 NPIPB3Q92617 1050 aa11.25□□□□□ -0.61
TRIM4-201ENST00000349062 PTPN13Q12923 2485 aa11.25□□□□□ -0.61
TRIM4-201ENST00000349062 SCO2A0A1W2PP80 73 aa11.25□□□□□ -0.61
TRIM4-201ENST00000349062 DLL1O00548 723 aa11.25□□□□□ -0.61
TRIM4-201ENST00000349062 NABP2Q9BQ15 211 aa11.25□□□□□ -0.61
TRIM4-201ENST00000349062 GNLYP22749 145 aa11.24□□□□□ -0.61
TRIM4-201ENST00000349062 ADMP35318 185 aa11.24□□□□□ -0.61
TRIM4-201ENST00000349062 OR4C13Q8NGP0 309 aa11.24□□□□□ -0.61
TRIM4-201ENST00000349062 CCDC168Q8NDH2 2452 aa11.24□□□□□ -0.61
TRIM4-201ENST00000349062 NPPCP23582 126 aa11.24□□□□□ -0.61
TRIM4-201ENST00000349062 PPOXP50336 477 aa11.24□□□□□ -0.61
TRIM4-201ENST00000349062 ACTL10Q5JWF8 245 aa11.24□□□□□ -0.61
TRIM4-201ENST00000349062 NHLRC2Q8NBF2 726 aa11.24□□□□□ -0.61
TRIM4-201ENST00000349062 ANAPC16Q96DE5 110 aa11.24□□□□□ -0.61
TRIM4-201ENST00000349062 VAMP8Q9BV40 100 aa11.24□□□□□ -0.61
TRIM4-201ENST00000349062 TMEM133Q9H2Q1 129 aa11.24□□□□□ -0.61
TRIM4-201ENST00000349062 IGKV1OR2-108A0A075B7D4 117 aa11.24□□□□□ -0.61
TRIM4-201ENST00000349062 F6UZH7 168 aa11.24□□□□□ -0.61
TRIM4-201ENST00000349062 AREGP15514 252 aa11.24□□□□□ -0.61
TRIM4-201ENST00000349062 MEF2CQ06413 473 aaPredicted RBP11.24□□□□□ -0.61
TRIM4-201ENST00000349062 OR1L8Q8NGR8 309 aa11.24□□□□□ -0.61
TRIM4-201ENST00000349062 WASHC3Q9Y3C0 194 aa11.24□□□□□ -0.61
TRIM4-201ENST00000349062 IGHV3OR16-10A0A075B7F0 116 aa11.23□□□□□ -0.61
TRIM4-201ENST00000349062 IGHV2-26A0A0B4J1V2 119 aa11.23□□□□□ -0.61
TRIM4-201ENST00000349062 EFNB3Q15768 340 aa11.23□□□□□ -0.61
TRIM4-201ENST00000349062 PRR31Q5SQ13 230 aa11.23□□□□□ -0.61
TRIM4-201ENST00000349062 FOXA2Q9Y261 457 aaPredicted RBP11.23□□□□□ -0.61
TRIM4-201ENST00000349062 CREBBPQ92793 2442 aa11.23□□□□□ -0.61
TRIM4-201ENST00000349062 CRISP2P16562 243 aa11.23□□□□□ -0.61
TRIM4-201ENST00000349062 PMCHP20382 165 aa11.23□□□□□ -0.61
TRIM4-201ENST00000349062 IER3P46695 156 aa11.23□□□□□ -0.61
TRIM4-201ENST00000349062 TCL1AP56279 114 aa11.23□□□□□ -0.61
TRIM4-201ENST00000349062 WT1-ASQ06250 92 aa11.23□□□□□ -0.61
TRIM4-201ENST00000349062 C1orf194Q5T5A4 169 aa11.23□□□□□ -0.61
TRIM4-201ENST00000349062 OR8B3Q8NGG8 313 aa11.23□□□□□ -0.61
TRIM4-201ENST00000349062 SLC35E1Q96K37 410 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms