RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 PVALBP20472 110 aaPredicted RBP9.12□□□□□ -0.95
SNCA-202ENST00000345009 HOXD3P31249 432 aaPredicted RBP9.12□□□□□ -0.95
SNCA-202ENST00000345009 OPRK1P41145 380 aa9.12□□□□□ -0.95
SNCA-202ENST00000345009 MFAP2P55001 183 aa9.12□□□□□ -0.95
SNCA-202ENST00000345009 DEFA5Q01523 94 aa9.12□□□□□ -0.95
SNCA-202ENST00000345009 BSXQ3C1V8 233 aa9.12□□□□□ -0.95
SNCA-202ENST00000345009 UBAC2Q8NBM4 344 aa9.12□□□□□ -0.95
SNCA-202ENST00000345009 OR4D5Q8NGN0 318 aa9.12□□□□□ -0.95
SNCA-202ENST00000345009 OR10C1Q96KK4 312 aa9.12□□□□□ -0.95
SNCA-202ENST00000345009 MAGT1Q9H0U3 335 aa9.12□□□□□ -0.95
SNCA-202ENST00000345009 ZMAT5Q9UDW3 170 aaKnown RBP9.12□□□□□ -0.95
SNCA-202ENST00000345009 DMRT1Q9Y5R6 373 aa9.12□□□□□ -0.95
SNCA-202ENST00000345009 NOTCH1P46531 2555 aa9.11□□□□□ -0.95
SNCA-202ENST00000345009 MFSD2BA6NFX1 497 aa9.11□□□□□ -0.95
SNCA-202ENST00000345009 I3L2K1 104 aa9.11□□□□□ -0.95
SNCA-202ENST00000345009 K7EIM0 57 aa9.11□□□□□ -0.95
SNCA-202ENST00000345009 L7N2F9 121 aa9.11□□□□□ -0.95
SNCA-202ENST00000345009 CCSO14618 274 aa9.11□□□□□ -0.95
SNCA-202ENST00000345009 OVOL1O14753 267 aa9.11□□□□□ -0.95
SNCA-202ENST00000345009 NUPL2O15504 423 aaKnown RBP9.11□□□□□ -0.95
SNCA-202ENST00000345009 GNG7O60262 68 aa9.11□□□□□ -0.95
SNCA-202ENST00000345009 IGHV3-23P01764 117 aa9.11□□□□□ -0.95
SNCA-202ENST00000345009 IAPPP10997 89 aa9.11□□□□□ -0.95
SNCA-202ENST00000345009 SPNP16150 400 aa9.11□□□□□ -0.95
SNCA-202ENST00000345009 FCGR2BP31994 310 aaPredicted RBP9.11□□□□□ -0.95
SNCA-202ENST00000345009 TAS2R30P59541 319 aa9.11□□□□□ -0.95
SNCA-202ENST00000345009 POLR2GP62487 172 aaKnown RBP eCLIP9.11□□□□□ -0.95
SNCA-202ENST00000345009 VAMP2P63027 116 aa9.11□□□□□ -0.95
SNCA-202ENST00000345009 PVRIGQ6DKI7 326 aa9.11□□□□□ -0.95
SNCA-202ENST00000345009 ACSM6Q6P461 480 aa9.11□□□□□ -0.95
SNCA-202ENST00000345009 DCUN1D4Q92564 292 aa9.11□□□□□ -0.95
SNCA-202ENST00000345009 KRTAP4-8Q9BYQ9 185 aa9.11□□□□□ -0.95
SNCA-202ENST00000345009 PEMTQ9UBM1 199 aa9.11□□□□□ -0.95
SNCA-202ENST00000345009 PAIP2BQ9ULR5 123 aaKnown RBP9.11□□□□□ -0.95
SNCA-202ENST00000345009 STRAPQ9Y3F4 350 aaKnown RBP9.11□□□□□ -0.95
SNCA-202ENST00000345009 S4R3C0 116 aa9.11□□□□□ -0.95
SNCA-202ENST00000345009 TRAV30A0A087WSZ9 112 aa9.1□□□□□ -0.95
SNCA-202ENST00000345009 IGHV3-21A0A0B4J1V1 117 aa9.1□□□□□ -0.95
SNCA-202ENST00000345009 C7orf66A4D0T2 115 aa9.1□□□□□ -0.95
SNCA-202ENST00000345009 OR2T8A6NH00 312 aa9.1□□□□□ -0.95
SNCA-202ENST00000345009 GOSR2O14653 212 aa9.1□□□□□ -0.95
SNCA-202ENST00000345009 TGOLN2O43493 480 aa9.1□□□□□ -0.95
SNCA-202ENST00000345009 SSSCA1O60232 199 aa9.1□□□□□ -0.95
SNCA-202ENST00000345009 RLN2P04090 185 aa9.1□□□□□ -0.95
SNCA-202ENST00000345009 GPR183P32249 361 aa9.1□□□□□ -0.95
SNCA-202ENST00000345009 GPX4P36969 197 aaPredicted RBP9.1□□□□□ -0.95
SNCA-202ENST00000345009 INSL3P51460 131 aa9.1□□□□□ -0.95
SNCA-202ENST00000345009 SLURP1P55000 103 aa9.1□□□□□ -0.95
SNCA-202ENST00000345009 RELQ04864 619 aaPredicted RBP9.1□□□□□ -0.95
SNCA-202ENST00000345009 KLF5Q13887 457 aaPredicted RBP9.1□□□□□ -0.95
SNCA-202ENST00000345009 SPANXN5Q5MJ07 72 aa9.1□□□□□ -0.95
SNCA-202ENST00000345009 GPHB5Q86YW7 130 aa9.1□□□□□ -0.95
SNCA-202ENST00000345009 C1QL4Q86Z23 238 aa9.1□□□□□ -0.95
SNCA-202ENST00000345009 CACNG8Q8WXS5 425 aa9.1□□□□□ -0.95
SNCA-202ENST00000345009 DLX4Q92988 240 aaPredicted RBP9.1□□□□□ -0.95
SNCA-202ENST00000345009 SMIM8Q96KF7 97 aa9.1□□□□□ -0.95
SNCA-202ENST00000345009 CCDC140Q96MF4 163 aa9.1□□□□□ -0.95
SNCA-202ENST00000345009 PSENENQ9NZ42 101 aa9.1□□□□□ -0.95
SNCA-202ENST00000345009 ZNF320A2RRD8 509 aa9.09□□□□□ -0.95
SNCA-202ENST00000345009 SEC14L6B5MCN3 397 aa9.09□□□□□ -0.95
SNCA-202ENST00000345009 PPP5D1E7EU14 171 aa9.09□□□□□ -0.95
SNCA-202ENST00000345009 BMPR1BO00238 502 aa9.09□□□□□ -0.95
SNCA-202ENST00000345009 SCAF4O95104 1147 aaKnown RBP9.09□□□□□ -0.95
SNCA-202ENST00000345009 OR2C1O95371 312 aa9.09□□□□□ -0.95
SNCA-202ENST00000345009 TRBV12-3P01733 135 aa9.09□□□□□ -0.95
SNCA-202ENST00000345009 MBPP02686 304 aaPredicted RBP9.09□□□□□ -0.95
SNCA-202ENST00000345009 SYNJ2BPP57105 145 aa9.09□□□□□ -0.95
SNCA-202ENST00000345009 OXA1LQ15070 435 aa9.09□□□□□ -0.95
SNCA-202ENST00000345009 C9orf66Q5T8R8 295 aa9.09□□□□□ -0.95
SNCA-202ENST00000345009 OR4X1Q8NH49 305 aa9.09□□□□□ -0.95
SNCA-202ENST00000345009 OR4C12Q96R67 309 aa9.09□□□□□ -0.95
SNCA-202ENST00000345009 NMES1Q9C002 83 aa9.09□□□□□ -0.95
SNCA-202ENST00000345009 MED28Q9H204 178 aa9.09□□□□□ -0.95
SNCA-202ENST00000345009 TSC22D2O75157 780 aa9.08□□□□□ -0.96
SNCA-202ENST00000345009 S100A10P60903 97 aa9.08□□□□□ -0.96
SNCA-202ENST00000345009 CD69Q07108 199 aa9.08□□□□□ -0.96
SNCA-202ENST00000345009 Q8N3U1 123 aa9.08□□□□□ -0.96
SNCA-202ENST00000345009 OR9G4Q8NGQ1 327 aa9.08□□□□□ -0.96
SNCA-202ENST00000345009 SLC35E1Q96K37 410 aa9.08□□□□□ -0.96
SNCA-202ENST00000345009 MGAT4CQ9UBM8 478 aa9.08□□□□□ -0.96
SNCA-202ENST00000345009 LSM5Q9Y4Y9 91 aaKnown RBP9.08□□□□□ -0.96
SNCA-202ENST00000345009 ALG5Q9Y673 324 aa9.08□□□□□ -0.96
SNCA-202ENST00000345009 C15orf62A8K5M9 175 aa9.07□□□□□ -0.96
SNCA-202ENST00000345009 LGALS9O00182 355 aa9.07□□□□□ -0.96
SNCA-202ENST00000345009 NDUFA4O00483 81 aa9.07□□□□□ -0.96
SNCA-202ENST00000345009 SAP30O75446 220 aa9.07□□□□□ -0.96
SNCA-202ENST00000345009 CLN5O75503 358 aa9.07□□□□□ -0.96
SNCA-202ENST00000345009 IGHV3-48P01763 117 aa9.07□□□□□ -0.96
SNCA-202ENST00000345009 FABP1P07148 127 aa9.07□□□□□ -0.96
SNCA-202ENST00000345009 CTSGP08311 255 aa9.07□□□□□ -0.96
SNCA-202ENST00000345009 PET100P0DJ07 73 aa9.07□□□□□ -0.96
SNCA-202ENST00000345009 IGLL1P15814 213 aa9.07□□□□□ -0.96
SNCA-202ENST00000345009 BCAP31P51572 246 aa9.07□□□□□ -0.96
SNCA-202ENST00000345009 TMEM116Q8NCL8 245 aa9.07□□□□□ -0.96
SNCA-202ENST00000345009 ZC4H2Q9NQZ6 224 aa9.07□□□□□ -0.96
SNCA-202ENST00000345009 UFC1Q9Y3C8 167 aa9.07□□□□□ -0.96
SNCA-202ENST00000345009 H3BP45 60 aa9.06□□□□□ -0.96
SNCA-202ENST00000345009 K7EPK0 472 aa9.06□□□□□ -0.96
SNCA-202ENST00000345009 EIF4EBP3O60516 100 aaPredicted RBP9.06□□□□□ -0.96
SNCA-202ENST00000345009 YIF1AO95070 293 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms