RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 CRYGDP07320 174 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 WDR81Q562E7 1941 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 IGLV3-16A0A075B6K0 115 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 MPV17L2Q567V2 206 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 PIP4P1Q86T03 277 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 PROCRQ9UNN8 238 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 KCPQ6ZWJ8 1503 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 DEFB134Q4QY38 66 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 PFN4Q8NHR9 129 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 PRO1854Q9UHT4 67 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 C3orf22Q8N5N4 141 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 H1FXQ92522 213 aaKnown RBP3.17□□□□□ -1.9
SYNE2-202ENST00000344113 OTORQ9NRC9 128 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 TMEM74BQ9NUR3 256 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 PEX7O00628 323 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 BUB3O43684 328 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 CRPP02741 224 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 FOXA1P55317 472 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 ID3Q02535 119 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 FOXI1Q12951 378 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 C8orf31Q8N9H6 132 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 A0A1B0GTL3 188 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 NRTNQ99748 197 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 HMGN4O00479 90 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 NDUFB1O75438 58 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 C1orf105O95561 183 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 LINC01600Q96MT4 127 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 IGKV6-21A0A0C4DH24 114 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 DUSP14O95147 198 aaKnown RBP3.16□□□□□ -1.9
SYNE2-202ENST00000344113 ZNF260Q3ZCT1 412 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 ASCL5Q7RTU5 278 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 NPYP01303 97 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 PSG4Q00888 419 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 TNRC6CQ9HCJ0 1690 aaKnown RBP3.16□□□□□ -1.9
SYNE2-202ENST00000344113 TAF1P21675 1872 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 FLG2Q5D862 2391 aaPredicted RBP3.16□□□□□ -1.9
SYNE2-202ENST00000344113 LGALS2P05162 132 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 LAGE3Q14657 143 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 CENPWQ5EE01 88 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 SFTPA2Q8IWL1 248 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 SFTPA1Q8IWL2 248 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 ZNF721Q8TF20 911 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 TMEM54Q969K7 222 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 APOHP02749 345 aaPredicted RBP3.16□□□□□ -1.9
SYNE2-202ENST00000344113 MYF5P13349 255 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 LY6KQ17RY6 165 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 GCSAMQ8N6F7 178 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 DSCR8Q96T75 97 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 MYMXA0A1B0GTQ4 84 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 FRRS1LQ9P0K9 344 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 B3GALT4O96024 378 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 GP9P14770 177 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 MUC21A0A0G2JKD1 596 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 MUC21A0A140T8X8 626 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 F5H768 121 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 RS1O15537 224 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 P2RY6Q15077 328 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 C2orf83Q53S99 150 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 MUC21Q5SSG8 566 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 MRPS18BQ9Y676 258 aaKnown RBP3.16□□□□□ -1.9
SYNE2-202ENST00000344113 SHROOM3Q8TF72 1996 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 CSN3P07498 182 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 COL8A2P25067 703 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 FAM189BP81408 668 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 LGALS9BQ3B8N2 356 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 LGALS9CQ6DKI2 356 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 CDK2AP2O75956 126 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 C3P01024 1663 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 ZNF818PQ6ZRF7 136 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 CDK5RAP2Q96SN8 1893 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 TRAV41A0A0B4J266 112 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 GRIFINA4D1Z8 144 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 CRYGSP22914 178 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 LINC00305Q7Z4B0 112 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 TRBV20OR9-2A0A075B6H5 130 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 C21orf140B9A014 251 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 FOXC2Q99958 501 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 SLC25A39Q9BZJ4 359 aaPredicted RBP3.16□□□□□ -1.9
SYNE2-202ENST00000344113 Q8TCH9 128 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 C22orf39Q6P5X5 142 aa3.16□□□□□ -1.9
SYNE2-202ENST00000344113 GYPBP06028 91 aa3.15□□□□□ -1.9
SYNE2-202ENST00000344113 INSL4Q14641 139 aa3.15□□□□□ -1.9
SYNE2-202ENST00000344113 J3KTA2 159 aa3.15□□□□□ -1.9
SYNE2-202ENST00000344113 SPINK4O60575 86 aa3.15□□□□□ -1.9
SYNE2-202ENST00000344113 COX20Q5RI15 118 aa3.15□□□□□ -1.9
SYNE2-202ENST00000344113 TJP1Q07157 1748 aa3.15□□□□□ -1.9
SYNE2-202ENST00000344113 CAMTA1Q9Y6Y1 1673 aa3.15□□□□□ -1.9
SYNE2-202ENST00000344113 RPL23P62829 140 aaKnown RBP3.15□□□□□ -1.9
SYNE2-202ENST00000344113 ZFP36L1Q07352 338 aaKnown RBP3.15□□□□□ -1.9
SYNE2-202ENST00000344113 ZG16O60844 167 aa3.15□□□□□ -1.9
SYNE2-202ENST00000344113 CD3EP07766 207 aa3.15□□□□□ -1.9
SYNE2-202ENST00000344113 CEACAM4O75871 244 aa3.15□□□□□ -1.9
SYNE2-202ENST00000344113 IGLV3-25P01717 112 aa3.15□□□□□ -1.9
SYNE2-202ENST00000344113 GLRXP35754 106 aa3.15□□□□□ -1.9
SYNE2-202ENST00000344113 GFERP55789 205 aa3.15□□□□□ -1.9
SYNE2-202ENST00000344113 ARHGAP5-AS1Q96IT6 56 aa3.15□□□□□ -1.9
SYNE2-202ENST00000344113 CD33P20138 364 aa3.15□□□□□ -1.9
SYNE2-202ENST00000344113 CDAP32320 146 aa3.15□□□□□ -1.9
SYNE2-202ENST00000344113 AKAP11Q9UKA4 1901 aa3.15□□□□□ -1.91
SYNE2-202ENST00000344113 NPFFO15130 113 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms