RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 LINC00312Q9Y6C7 94 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 SEC16AO15027 2179 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 NOTCH4Q99466 2003 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 MGPP08493 103 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 RIPPLY3P57055 190 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 OCIAD2Q56VL3 154 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 WDR82Q6UXN9 313 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 ZNF502Q8TBZ5 544 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 OTORQ9NRC9 128 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 SNAI2O43623 268 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 LILRA1O75019 489 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 IGLC2P0DOY2 106 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 IGLC3P0DOY3 106 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 SELLP14151 372 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 GGNQ86UU5 652 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 COL4A3Q01955 1670 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 IGKV3D-15A0A087WSY6 115 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.98□□□□□ -1.77
CSMD3-203ENST00000343508 SS18L1O75177 396 aaPredicted RBP3.98□□□□□ -1.77
CSMD3-203ENST00000343508 MNX1P50219 401 aaPredicted RBP3.98□□□□□ -1.77
CSMD3-203ENST00000343508 HCP5Q6MZN7 132 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 GFRALQ6UXV0 394 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 C17orf82Q86X59 251 aaPredicted RBP3.98□□□□□ -1.77
CSMD3-203ENST00000343508 LEAP2Q969E1 77 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 FSCN3Q9NQT6 498 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 IGHV2-26A0A0B4J1V2 119 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 UPK2O00526 184 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 TMEM50AO95807 157 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 PPBPP02775 128 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 SAA1P0DJI8 122 aaPredicted RBP3.98□□□□□ -1.77
CSMD3-203ENST00000343508 PAX2Q02962 417 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 MEF2CQ06413 473 aaPredicted RBP3.98□□□□□ -1.77
CSMD3-203ENST00000343508 ZNF726P1Q15940 193 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 MBNL2Q5VZF2 373 aaKnown RBP3.98□□□□□ -1.77
CSMD3-203ENST00000343508 C18orf15Q96N68 181 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 BRCA2P51587 3418 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 ATG2AQ2TAZ0 1938 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 F2Z2F3 143 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 C20orf204Q6ZNR8 217 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 UNQ5815/PRO19632Q6UWF5 114 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 CENPVQ7Z7K6 275 aaPredicted RBP3.97□□□□□ -1.77
CSMD3-203ENST00000343508 MBNL3Q9NUK0 354 aaKnown RBP3.97□□□□□ -1.77
CSMD3-203ENST00000343508 TRAV8-6A0A0B4J262 113 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 SMIM27A0A1W2PRY6 76 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 FAM53AQ6NSI3 398 aaPredicted RBP3.97□□□□□ -1.77
CSMD3-203ENST00000343508 SLC25A2Q9BXI2 301 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 CLEC5AQ9NY25 188 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 ALPK2Q86TB3 2170 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 ETV2O00321 342 aaPredicted RBP3.97□□□□□ -1.77
CSMD3-203ENST00000343508 IGKCP01834 107 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 ZNF585BQ52M93 769 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 Q6ZWC4 215 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 FER1L6-AS1Q8NA97 138 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 VWCEQ96DN2 955 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 TMUB1Q9BVT8 246 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 CDKN1BP46527 198 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 DLX6P56179 175 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 CCL8P80075 99 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 TMEM249Q2WGJ8 235 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 LIME1Q9H400 295 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 ZNF256Q9Y2P7 627 aaPredicted RBP3.97□□□□□ -1.77
CSMD3-203ENST00000343508 A0A1B0GWB2 263 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 MOSP00540 346 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 PMS2CLQ68D20 193 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 SHISA5Q8N114 240 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 RPRMLQ8N4K4 120 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 OR10J6PQ8NGY7 276 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 FGFBP3Q8TAT2 258 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 C16orf92Q96LL3 132 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.97□□□□□ -1.77
CSMD3-203ENST00000343508 CD69Q07108 199 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 Q6ZRM9 215 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 ITLN1Q8WWA0 313 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 METTL26Q96S19 204 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 RAXQ9Y2V3 346 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 GAGE13Q4V321 117 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 LINC01549A6NIU2 74 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 GFRA3O60609 400 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 DPM2O94777 84 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 APOMO95445 188 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 TPTE2P1Q5T6R2 138 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 PEAR1Q5VY43 1037 aaPredicted RBP3.97□□□□□ -1.77
CSMD3-203ENST00000343508 V9GYV3 84 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 FTH1P19P0C7X4 201 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 PSG1P11464 419 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 CDPF1Q6NVV7 123 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 OR9G1Q8NH87 305 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 KLHDC3Q9BQ90 382 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 CYSLTR1Q9Y271 337 aa3.97□□□□□ -1.77
CSMD3-203ENST00000343508 MUC21A0A0G2JKD1 596 aa3.96□□□□□ -1.77
CSMD3-203ENST00000343508 MUC21A0A140T8X8 626 aa3.96□□□□□ -1.77
CSMD3-203ENST00000343508 ZNHIT1O43257 154 aa3.96□□□□□ -1.77
CSMD3-203ENST00000343508 NTF4P34130 210 aa3.96□□□□□ -1.77
CSMD3-203ENST00000343508 SRSF1Q07955 248 aaKnown RBP eCLIP3.96□□□□□ -1.77
CSMD3-203ENST00000343508 MUC21Q5SSG8 566 aa3.96□□□□□ -1.77
CSMD3-203ENST00000343508 ZNF788Q6ZQV5 615 aa3.96□□□□□ -1.77
CSMD3-203ENST00000343508 KIR2DL4Q99706 377 aa3.96□□□□□ -1.77
CSMD3-203ENST00000343508 FOXI3A8MTJ6 420 aaPredicted RBP3.96□□□□□ -1.77
CSMD3-203ENST00000343508 WNT2P09544 360 aa3.96□□□□□ -1.77
CSMD3-203ENST00000343508 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms