RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 J3QR06 171 aa12.14□□□□□ -0.47
CLCN1-201ENST00000343257 KLK10O43240 276 aa12.14□□□□□ -0.47
CLCN1-201ENST00000343257 TIMM8AO60220 97 aaPredicted RBP12.14□□□□□ -0.47
CLCN1-201ENST00000343257 C8orf88P0DMB2 117 aa12.14□□□□□ -0.47
CLCN1-201ENST00000343257 IL11RAQ14626 422 aa12.14□□□□□ -0.47
CLCN1-201ENST00000343257 WDR82Q6UXN9 313 aa12.14□□□□□ -0.47
CLCN1-201ENST00000343257 WDR31Q8NA23 367 aa12.14□□□□□ -0.47
CLCN1-201ENST00000343257 LRRC29Q8WV35 223 aa12.14□□□□□ -0.47
CLCN1-201ENST00000343257 GRAMD2BQ96HH9 432 aa12.14□□□□□ -0.47
CLCN1-201ENST00000343257 ST20Q9HBF5 79 aa12.14□□□□□ -0.47
CLCN1-201ENST00000343257 A0A1W2PRE2 83 aa12.13□□□□□ -0.47
CLCN1-201ENST00000343257 TAS2R45P59539 299 aa12.13□□□□□ -0.47
CLCN1-201ENST00000343257 C12orf54Q6X4T0 127 aa12.13□□□□□ -0.47
CLCN1-201ENST00000343257 CT55Q8WUE5 264 aa12.13□□□□□ -0.47
CLCN1-201ENST00000343257 DUSP23Q9BVJ7 150 aa12.13□□□□□ -0.47
CLCN1-201ENST00000343257 SLC25A10Q9UBX3 287 aaPredicted RBP12.13□□□□□ -0.47
CLCN1-201ENST00000343257 TNRC6BQ9UPQ9 1833 aaKnown RBP12.13□□□□□ -0.47
CLCN1-201ENST00000343257 SRFP11831 508 aa12.13□□□□□ -0.47
CLCN1-201ENST00000343257 MBD6Q96DN6 1003 aa12.13□□□□□ -0.47
CLCN1-201ENST00000343257 TMEM191AQ9H0A3 160 aa12.13□□□□□ -0.47
CLCN1-201ENST00000343257 FAM201AQ5SY85 155 aa12.12□□□□□ -0.47
CLCN1-201ENST00000343257 ASCL2Q99929 193 aa12.12□□□□□ -0.47
CLCN1-201ENST00000343257 SLC25A33Q9BSK2 321 aa12.12□□□□□ -0.47
CLCN1-201ENST00000343257 PRDX2P32119 198 aa12.12□□□□□ -0.47
CLCN1-201ENST00000343257 GPR183P32249 361 aa12.12□□□□□ -0.47
CLCN1-201ENST00000343257 S100A7AQ86SG5 101 aa12.12□□□□□ -0.47
CLCN1-201ENST00000343257 TMEM251Q8N6I4 163 aa12.12□□□□□ -0.47
CLCN1-201ENST00000343257 OR1B1Q8NGR6 318 aa12.12□□□□□ -0.47
CLCN1-201ENST00000343257 SAP25Q8TEE9 199 aa12.12□□□□□ -0.47
CLCN1-201ENST00000343257 TTTY12Q9BZ98 90 aa12.12□□□□□ -0.47
CLCN1-201ENST00000343257 COMMD5Q9GZQ3 224 aa12.12□□□□□ -0.47
CLCN1-201ENST00000343257 CEP192Q8TEP8 1941 aa12.12□□□□□ -0.47
CLCN1-201ENST00000343257 WISP2O76076 250 aa12.12□□□□□ -0.47
CLCN1-201ENST00000343257 ARF6P62330 175 aa12.12□□□□□ -0.47
CLCN1-201ENST00000343257 MRPL49Q13405 166 aaKnown RBP12.12□□□□□ -0.47
CLCN1-201ENST00000343257 KLF5Q13887 457 aaPredicted RBP12.12□□□□□ -0.47
CLCN1-201ENST00000343257 C1orf185Q5T7R7 199 aa12.12□□□□□ -0.47
CLCN1-201ENST00000343257 LINC00322Q6ZN03 302 aaPredicted RBP12.12□□□□□ -0.47
CLCN1-201ENST00000343257 IDI2-AS1Q9NZ38 188 aa12.12□□□□□ -0.47
CLCN1-201ENST00000343257 PCNX2A6NKB5 2137 aa12.11□□□□□ -0.47
CLCN1-201ENST00000343257 H3BUT2 72 aa12.11□□□□□ -0.47
CLCN1-201ENST00000343257 PEX7O00628 323 aa12.11□□□□□ -0.47
CLCN1-201ENST00000343257 ADH4P08319 380 aa12.11□□□□□ -0.47
CLCN1-201ENST00000343257 AP1S3Q96PC3 154 aa12.11□□□□□ -0.47
CLCN1-201ENST00000343257 SLC25A2Q9BXI2 301 aa12.11□□□□□ -0.47
CLCN1-201ENST00000343257 IFI27L2Q9H2X8 130 aa12.11□□□□□ -0.47
CLCN1-201ENST00000343257 BHLHA15Q7RTS1 189 aaPredicted RBP12.11□□□□□ -0.47
CLCN1-201ENST00000343257 OR4S2Q8NH73 311 aa12.11□□□□□ -0.47
CLCN1-201ENST00000343257 RND1Q92730 232 aa12.11□□□□□ -0.47
CLCN1-201ENST00000343257 ZNF430Q9H8G1 570 aaPredicted RBP12.11□□□□□ -0.47
CLCN1-201ENST00000343257 SCRT2Q9NQ03 307 aa12.11□□□□□ -0.47
CLCN1-201ENST00000343257 FER1L6-AS1Q8NA97 138 aa12.1□□□□□ -0.47
CLCN1-201ENST00000343257 TMUB1Q9BVT8 246 aa12.1□□□□□ -0.47
CLCN1-201ENST00000343257 B4GALT7Q9UBV7 327 aa12.1□□□□□ -0.47
CLCN1-201ENST00000343257 PEF1Q9UBV8 284 aaKnown RBP12.1□□□□□ -0.47
CLCN1-201ENST00000343257 MED13Q9UHV7 2174 aa12.1□□□□□ -0.47
CLCN1-201ENST00000343257 CD5LO43866 347 aa12.1□□□□□ -0.47
CLCN1-201ENST00000343257 FXYD7P58549 80 aa12.1□□□□□ -0.47
CLCN1-201ENST00000343257 PAXXQ9BUH6 204 aa12.1□□□□□ -0.47
CLCN1-201ENST00000343257 MAP1LC3CQ9BXW4 147 aa12.1□□□□□ -0.47
CLCN1-201ENST00000343257 PATE3B3GLJ2 98 aa12.1□□□□□ -0.47
CLCN1-201ENST00000343257 SLC25A5P05141 298 aaKnown RBP12.1□□□□□ -0.47
CLCN1-201ENST00000343257 SAA2P0DJI9 122 aaPredicted RBP12.1□□□□□ -0.47
CLCN1-201ENST00000343257 HTR1DP28221 377 aa12.1□□□□□ -0.47
CLCN1-201ENST00000343257 FAM173AQ9BQD7 235 aa12.1□□□□□ -0.47
CLCN1-201ENST00000343257 PLXNB1O43157 2135 aa12.09□□□□□ -0.47
CLCN1-201ENST00000343257 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.09□□□□□ -0.47
CLCN1-201ENST00000343257 COX7A2P2O60397 106 aa12.09□□□□□ -0.47
CLCN1-201ENST00000343257 IGLC1P0CG04 106 aa12.09□□□□□ -0.47
CLCN1-201ENST00000343257 HBBP68871 147 aa12.09□□□□□ -0.47
CLCN1-201ENST00000343257 SMIM21Q3B7S5 101 aa12.09□□□□□ -0.47
CLCN1-201ENST00000343257 TM4SF20Q53R12 229 aa12.09□□□□□ -0.47
CLCN1-201ENST00000343257 IGKV1-16P04430 117 aa12.09□□□□□ -0.47
CLCN1-201ENST00000343257 ABHD17BQ5VST6 288 aa12.09□□□□□ -0.47
CLCN1-201ENST00000343257 FAM71F2Q6NXP2 309 aa12.09□□□□□ -0.47
CLCN1-201ENST00000343257 ZNF329Q86UD4 541 aa12.09□□□□□ -0.47
CLCN1-201ENST00000343257 WIPF2Q8TF74 440 aaPredicted RBP12.09□□□□□ -0.47
CLCN1-201ENST00000343257 FAM167A-AS1Q96KT0 104 aa12.09□□□□□ -0.47
CLCN1-201ENST00000343257 ABI3Q9P2A4 366 aa12.09□□□□□ -0.47
CLCN1-201ENST00000343257 TRGV8A0A0C4DH27 118 aa12.08□□□□□ -0.48
CLCN1-201ENST00000343257 CHEK1O14757 476 aa12.08□□□□□ -0.48
CLCN1-201ENST00000343257 NCR2O95944 276 aa12.08□□□□□ -0.48
CLCN1-201ENST00000343257 HIST1H1EP10412 219 aaKnown RBP12.08□□□□□ -0.48
CLCN1-201ENST00000343257 CT45A1Q5HYN5 189 aa12.08□□□□□ -0.48
CLCN1-201ENST00000343257 Q71RC1 249 aaPredicted RBP12.08□□□□□ -0.48
CLCN1-201ENST00000343257 BPIFA4PQ86YQ2 179 aa12.08□□□□□ -0.48
CLCN1-201ENST00000343257 OR2Z1Q8NG97 314 aa12.08□□□□□ -0.48
CLCN1-201ENST00000343257 CT45A3Q8NHU0 189 aa12.08□□□□□ -0.48
CLCN1-201ENST00000343257 SMIM12Q96EX1 92 aa12.08□□□□□ -0.48
CLCN1-201ENST00000343257 JMJD8Q96S16 334 aa12.08□□□□□ -0.48
CLCN1-201ENST00000343257 ZNF835Q9Y2P0 537 aa12.08□□□□□ -0.48
CLCN1-201ENST00000343257 PTPRBP23467 1997 aa12.08□□□□□ -0.48
CLCN1-201ENST00000343257 TANC2Q9HCD6 1990 aa12.08□□□□□ -0.48
CLCN1-201ENST00000343257 SRRM4A7MD48 611 aaKnown RBP12.08□□□□□ -0.48
CLCN1-201ENST00000343257 IQCF6A8MYZ5 107 aa12.08□□□□□ -0.48
CLCN1-201ENST00000343257 OR1N2Q8NGR9 330 aa12.08□□□□□ -0.48
CLCN1-201ENST00000343257 PGPA6NDG6 321 aa12.08□□□□□ -0.48
CLCN1-201ENST00000343257 GNG7O60262 68 aa12.08□□□□□ -0.48
CLCN1-201ENST00000343257 ORM2P19652 201 aa12.08□□□□□ -0.48
CLCN1-201ENST00000343257 HIST1H1AQ02539 215 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms