RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 DNAJC4Q9NNZ3 241 aa11.77□□□□□ -0.53
TDP2-201ENST00000341060 KAAG1Q9UBP8 84 aa11.77□□□□□ -0.53
TDP2-201ENST00000341060 POLEQ07864 2286 aa11.77□□□□□ -0.53
TDP2-201ENST00000341060 CACNA1AO00555 2505 aa11.76□□□□□ -0.53
TDP2-201ENST00000341060 TRBV9A0A0B4J1U6 114 aa11.76□□□□□ -0.53
TDP2-201ENST00000341060 GRIFINA4D1Z8 144 aa11.76□□□□□ -0.53
TDP2-201ENST00000341060 DLX6P56179 175 aa11.76□□□□□ -0.53
TDP2-201ENST00000341060 GFRALQ6UXV0 394 aa11.76□□□□□ -0.53
TDP2-201ENST00000341060 OR1L6Q8NGR2 347 aa11.76□□□□□ -0.53
TDP2-201ENST00000341060 ZNF430Q9H8G1 570 aaPredicted RBP11.76□□□□□ -0.53
TDP2-201ENST00000341060 OSTCQ9NRP0 149 aa11.76□□□□□ -0.53
TDP2-201ENST00000341060 SH3BGRL2Q9UJC5 107 aa11.76□□□□□ -0.53
TDP2-201ENST00000341060 VSTM5A8MXK1 200 aa11.75□□□□□ -0.53
TDP2-201ENST00000341060 ISLRO14498 428 aa11.75□□□□□ -0.53
TDP2-201ENST00000341060 IGLV2-8P01709 118 aa11.75□□□□□ -0.53
TDP2-201ENST00000341060 ESDP10768 282 aa11.75□□□□□ -0.53
TDP2-201ENST00000341060 PPOXP50336 477 aa11.75□□□□□ -0.53
TDP2-201ENST00000341060 SUB1P53999 127 aaKnown RBP eCLIP11.75□□□□□ -0.531e-7■■■■□ 20.1
TDP2-201ENST00000341060 RAB4BP61018 213 aa11.75□□□□□ -0.53
TDP2-201ENST00000341060 C10orf55Q5SWW7 151 aa11.75□□□□□ -0.53
TDP2-201ENST00000341060 OR8I2Q8N0Y5 310 aa11.75□□□□□ -0.53
TDP2-201ENST00000341060 CMTM2Q8TAZ6 248 aa11.75□□□□□ -0.53
TDP2-201ENST00000341060 IGF2BP2-AS1Q96M15 143 aa11.75□□□□□ -0.53
TDP2-201ENST00000341060 TP53TG3Q9ULZ0 132 aa11.75□□□□□ -0.53
TDP2-201ENST00000341060 ZNF835Q9Y2P0 537 aa11.75□□□□□ -0.53
TDP2-201ENST00000341060 FCN1O00602 326 aa11.75□□□□□ -0.53
TDP2-201ENST00000341060 CRISP2P16562 243 aa11.75□□□□□ -0.53
TDP2-201ENST00000341060 IER3P46695 156 aa11.75□□□□□ -0.53
TDP2-201ENST00000341060 UBE2L3P68036 154 aaKnown RBP11.75□□□□□ -0.53
TDP2-201ENST00000341060 SSBP2P81877 361 aaPredicted RBP11.75□□□□□ -0.53
TDP2-201ENST00000341060 TMEM155Q4W5P6 130 aa11.75□□□□□ -0.53
TDP2-201ENST00000341060 TGIF2LXQ8IUE1 241 aa11.75□□□□□ -0.53
TDP2-201ENST00000341060 GNB1LQ9BYB4 327 aa11.75□□□□□ -0.53
TDP2-201ENST00000341060 RNASE7Q9H1E1 156 aaKnown RBP11.75□□□□□ -0.53
TDP2-201ENST00000341060 MALRD1Q5VYJ5 2156 aa11.75□□□□□ -0.53
TDP2-201ENST00000341060 TCRBV4S1A1TA0A5B7 111 aa11.74□□□□□ -0.53
TDP2-201ENST00000341060 SNURFLB1AK76 121 aa11.74□□□□□ -0.53
TDP2-201ENST00000341060 MC5RP33032 325 aa11.74□□□□□ -0.53
TDP2-201ENST00000341060 LINC00310P59036 64 aa11.74□□□□□ -0.53
TDP2-201ENST00000341060 CX3CL1P78423 397 aa11.74□□□□□ -0.53
TDP2-201ENST00000341060 RPL19P84098 196 aaKnown RBP11.74□□□□□ -0.53
TDP2-201ENST00000341060 TBR1Q16650 682 aa11.74□□□□□ -0.53
TDP2-201ENST00000341060 OR5AU1Q8NGC0 362 aa11.74□□□□□ -0.53
TDP2-201ENST00000341060 TLN1Q9Y490 2541 aaKnown RBP11.74□□□□□ -0.53
TDP2-201ENST00000341060 IGKV1D-37A0A075B6S9 117 aa11.74□□□□□ -0.53
TDP2-201ENST00000341060 TRAV5A0A0B4J249 113 aa11.74□□□□□ -0.53
TDP2-201ENST00000341060 SHISA9B4DS77 424 aa11.74□□□□□ -0.53
TDP2-201ENST00000341060 COX7A2P2O60397 106 aa11.74□□□□□ -0.53
TDP2-201ENST00000341060 IGHV1-8P0DP01 117 aa11.74□□□□□ -0.53
TDP2-201ENST00000341060 BPIFB3P59826 476 aa11.74□□□□□ -0.53
TDP2-201ENST00000341060 VMA21Q3ZAQ7 101 aa11.74□□□□□ -0.53
TDP2-201ENST00000341060 IBA57Q5T440 356 aaKnown RBP11.74□□□□□ -0.53
TDP2-201ENST00000341060 THAP8Q8NA92 274 aa11.74□□□□□ -0.53
TDP2-201ENST00000341060 ST6GALNAC3Q8NDV1 305 aa11.74□□□□□ -0.53
TDP2-201ENST00000341060 OR1L4Q8NGR5 311 aa11.74□□□□□ -0.53
TDP2-201ENST00000341060 NPIPB3Q92617 1050 aa11.74□□□□□ -0.53
TDP2-201ENST00000341060 MS4A10Q96PG2 267 aa11.74□□□□□ -0.53
TDP2-201ENST00000341060 NDUFAF3Q9BU61 184 aa11.74□□□□□ -0.53
TDP2-201ENST00000341060 CDC42EP3Q9UKI2 254 aa11.74□□□□□ -0.53
TDP2-201ENST00000341060 SLC25A17O43808 307 aa11.73□□□□□ -0.53
TDP2-201ENST00000341060 MT-ND6P03923 174 aa11.73□□□□□ -0.53
TDP2-201ENST00000341060 FRMD6-AS1P0C7T7 363 aa11.73□□□□□ -0.53
TDP2-201ENST00000341060 PAFAH1B2P68402 229 aa11.73□□□□□ -0.53
TDP2-201ENST00000341060 C10orf113Q5VZT2 155 aa11.73□□□□□ -0.53
TDP2-201ENST00000341060 DMRTC2Q8IXT2 367 aaPredicted RBP11.73□□□□□ -0.53
TDP2-201ENST00000341060 DYNLRB1Q9NP97 96 aa11.73□□□□□ -0.53
TDP2-201ENST00000341060 NGBQ9NPG2 151 aa11.73□□□□□ -0.53
TDP2-201ENST00000341060 ZNF355PQ9NSJ1 428 aa11.73□□□□□ -0.53
TDP2-201ENST00000341060 A0A1W2PPI3 338 aa11.72□□□□□ -0.53
TDP2-201ENST00000341060 SCGB1D1O95968 90 aa11.72□□□□□ -0.53
TDP2-201ENST00000341060 TPPP2P59282 170 aa11.72□□□□□ -0.53
TDP2-201ENST00000341060 TAS2R60P59551 318 aa11.72□□□□□ -0.53
TDP2-201ENST00000341060 RANP62826 216 aaKnown RBP11.72□□□□□ -0.53
TDP2-201ENST00000341060 Q0VG73 95 aa11.72□□□□□ -0.53
TDP2-201ENST00000341060 FXYD3Q14802 87 aa11.72□□□□□ -0.53
TDP2-201ENST00000341060 MRGPRG-AS1Q2M3A8 158 aa11.72□□□□□ -0.53
TDP2-201ENST00000341060 LBHQ53QV2 105 aaPredicted RBP11.72□□□□□ -0.53
TDP2-201ENST00000341060 WDR73Q6P4I2 378 aa11.72□□□□□ -0.53
TDP2-201ENST00000341060 PATE2Q6UY27 113 aa11.72□□□□□ -0.53
TDP2-201ENST00000341060 BEND2Q8NDZ0 799 aa11.72□□□□□ -0.53
TDP2-201ENST00000341060 TPSG1Q9NRR2 321 aa11.72□□□□□ -0.53
TDP2-201ENST00000341060 NAGKQ9UJ70 344 aa11.72□□□□□ -0.53
TDP2-201ENST00000341060 E7EQL1 145 aa11.72□□□□□ -0.53
TDP2-201ENST00000341060 SERF1AO75920 110 aa11.72□□□□□ -0.53
TDP2-201ENST00000341060 FAM87AP0C7U9 286 aa11.72□□□□□ -0.53
TDP2-201ENST00000341060 LGALS7P47929 136 aa11.72□□□□□ -0.53
TDP2-201ENST00000341060 COX19Q49B96 90 aa11.72□□□□□ -0.53
TDP2-201ENST00000341060 C11orf42Q8N5U0 333 aa11.72□□□□□ -0.53
TDP2-201ENST00000341060 SMIM27A0A1W2PRY6 76 aa11.71□□□□□ -0.53
TDP2-201ENST00000341060 FSTL3O95633 263 aa11.71□□□□□ -0.53
TDP2-201ENST00000341060 PYYP10082 97 aa11.71□□□□□ -0.53
TDP2-201ENST00000341060 RITA1Q96K30 269 aa11.71□□□□□ -0.53
TDP2-201ENST00000341060 PAXXQ9BUH6 204 aa11.71□□□□□ -0.53
TDP2-201ENST00000341060 TMEM133Q9H2Q1 129 aa11.71□□□□□ -0.53
TDP2-201ENST00000341060 MRPL36Q9P0J6 103 aaKnown RBP11.71□□□□□ -0.53
TDP2-201ENST00000341060 ITPR1Q14643 2758 aa11.71□□□□□ -0.53
TDP2-201ENST00000341060 IGHV1-69-2A0A0G2JMI3 117 aa11.71□□□□□ -0.54
TDP2-201ENST00000341060 MGST1P10620 155 aaKnown RBP11.71□□□□□ -0.54
TDP2-201ENST00000341060 NAT8BQ9UHF3 227 aa11.71□□□□□ -0.54
TDP2-201ENST00000341060 AMMECR1Q9Y4X0 333 aaPredicted RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms