RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 MALP21145 153 aa6.3□□□□□ -1.4
HIPK1-201ENST00000340480 TMEM37Q8WXS4 190 aa6.3□□□□□ -1.4
HIPK1-201ENST00000340480 OR4C46A6NHA9 309 aa6.3□□□□□ -1.4
HIPK1-201ENST00000340480 H3BVH4 76 aa6.3□□□□□ -1.4
HIPK1-201ENST00000340480 SRP19P09132 144 aaKnown RBP6.3□□□□□ -1.4
HIPK1-201ENST00000340480 CD99P14209 185 aa6.3□□□□□ -1.4
HIPK1-201ENST00000340480 DLX6P56179 175 aa6.3□□□□□ -1.4
HIPK1-201ENST00000340480 EFNB3Q15768 340 aa6.3□□□□□ -1.4
HIPK1-201ENST00000340480 COL25A1Q9BXS0 654 aaPredicted RBP6.3□□□□□ -1.4
HIPK1-201ENST00000340480 IFITM10A6NMD0 228 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 DUSP14O95147 198 aaKnown RBP6.29□□□□□ -1.4
HIPK1-201ENST00000340480 CA2P00918 260 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 APCSP02743 223 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 C2orf88Q9BSF0 95 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 TMEM70Q9BUB7 260 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 DNAJC4Q9NNZ3 241 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 RNF114Q9Y508 228 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 TP53BP1Q12888 1972 aaPredicted RBP6.29□□□□□ -1.4
HIPK1-201ENST00000340480 RBMY1BA6NDE4 496 aaKnown RBP6.29□□□□□ -1.4
HIPK1-201ENST00000340480 RBMY1EA6NEQ0 496 aaKnown RBP6.29□□□□□ -1.4
HIPK1-201ENST00000340480 PSCAO43653 123 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 RBMY1DP0C7P1 496 aaKnown RBP6.29□□□□□ -1.4
HIPK1-201ENST00000340480 SMIM6P0DI80 62 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 RBMY1A1P0DJD3 496 aaKnown RBP6.29□□□□□ -1.4
HIPK1-201ENST00000340480 RBMY1CP0DJD4 496 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 RPL29P47914 159 aaKnown RBP6.29□□□□□ -1.4
HIPK1-201ENST00000340480 C20orf204Q6ZNR8 217 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 GAFA1Q96PS6 74 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.29□□□□□ -1.4
HIPK1-201ENST00000340480 DPRXA6NFQ7 191 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 PAX1P15863 534 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 LCN2P80188 198 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 CD69Q07108 199 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 TEX36Q5VZQ5 186 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 MIC13Q5XKP0 118 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 MAP1LC3AQ9H492 121 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 PCDH15Q96QU1 1955 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 NUDT3O95989 172 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 TCTAP57738 103 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 Q6ZR03 302 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 OR8A1Q8NGG7 326 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 CLDND2Q8NHS1 167 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 REG4Q9BYZ8 158 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 FUT9Q9Y231 359 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 APC2O95996 2303 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 SLC25A20O43772 301 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 CD33P20138 364 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 LEPP41159 167 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 TMEM155Q4W5P6 130 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 SLC25A48Q6ZT89 311 aaKnown RBP6.29□□□□□ -1.4
HIPK1-201ENST00000340480 WDR86Q86TI4 376 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 NABP2Q9BQ15 211 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 MRPL20Q9BYC9 149 aaKnown RBP6.29□□□□□ -1.4
HIPK1-201ENST00000340480 NXT2Q9NPJ8 142 aaKnown RBP6.29□□□□□ -1.4
HIPK1-201ENST00000340480 CBY1Q9Y3M2 126 aa6.29□□□□□ -1.4
HIPK1-201ENST00000340480 CACNA1DQ01668 2161 aa6.28□□□□□ -1.4
HIPK1-201ENST00000340480 BTF3P20290 206 aaKnown RBP6.28□□□□□ -1.4
HIPK1-201ENST00000340480 NSUN5P1Q3KNT7 163 aa6.28□□□□□ -1.4
HIPK1-201ENST00000340480 WFIKKN1Q96NZ8 548 aa6.28□□□□□ -1.4
HIPK1-201ENST00000340480 NIT2Q9NQR4 276 aa6.28□□□□□ -1.4
HIPK1-201ENST00000340480 PPP1R27Q86WC6 154 aa6.28□□□□□ -1.4
HIPK1-201ENST00000340480 CKS2P33552 79 aa6.28□□□□□ -1.4
HIPK1-201ENST00000340480 RND2P52198 227 aa6.28□□□□□ -1.4
HIPK1-201ENST00000340480 C2orf83Q53S99 150 aa6.28□□□□□ -1.4
HIPK1-201ENST00000340480 SAPCD1Q5SSQ6 148 aa6.28□□□□□ -1.4
HIPK1-201ENST00000340480 FAM201AQ5SY85 155 aa6.28□□□□□ -1.4
HIPK1-201ENST00000340480 HCP5Q6MZN7 132 aa6.28□□□□□ -1.4
HIPK1-201ENST00000340480 TMEM167AQ8TBQ9 72 aa6.28□□□□□ -1.4
HIPK1-201ENST00000340480 COL5A1P20908 1838 aaPredicted RBP6.28□□□□□ -1.4
HIPK1-201ENST00000340480 TRAV9-1A0A075B6T8 112 aa6.28□□□□□ -1.4
HIPK1-201ENST00000340480 IL6RP08887 468 aaPredicted RBP6.28□□□□□ -1.4
HIPK1-201ENST00000340480 TCL1AP56279 114 aa6.28□□□□□ -1.4
HIPK1-201ENST00000340480 NEU1Q99519 415 aa6.28□□□□□ -1.4
HIPK1-201ENST00000340480 CGB1A6NKQ9 187 aa6.28□□□□□ -1.4
HIPK1-201ENST00000340480 FHITP49789 147 aa6.28□□□□□ -1.4
HIPK1-201ENST00000340480 SMUG1Q53HV7 270 aa6.28□□□□□ -1.4
HIPK1-201ENST00000340480 NDUFS6O75380 124 aaKnown RBP6.28□□□□□ -1.4
HIPK1-201ENST00000340480 SAA1P0DJI8 122 aaPredicted RBP6.28□□□□□ -1.4
HIPK1-201ENST00000340480 GCHFRP30047 84 aa6.28□□□□□ -1.4
HIPK1-201ENST00000340480 ASIPP42127 132 aa6.28□□□□□ -1.4
HIPK1-201ENST00000340480 GUSBP1Q15486 140 aa6.28□□□□□ -1.4
HIPK1-201ENST00000340480 LEAP2Q969E1 77 aa6.28□□□□□ -1.4
HIPK1-201ENST00000340480 FAM74A4Q5TZK3 123 aa6.27□□□□□ -1.41
HIPK1-201ENST00000340480 UNQ6494/PRO21346Q6UXR6 183 aa6.27□□□□□ -1.41
HIPK1-201ENST00000340480 LINC00311Q8N616 119 aa6.27□□□□□ -1.41
HIPK1-201ENST00000340480 LINC00469Q8N7U9 141 aa6.27□□□□□ -1.41
HIPK1-201ENST00000340480 OR51G1Q8NGK1 321 aa6.27□□□□□ -1.41
HIPK1-201ENST00000340480 WFDC1Q9HC57 220 aa6.27□□□□□ -1.41
HIPK1-201ENST00000340480 ZNF581Q9P0T4 197 aa6.27□□□□□ -1.41
HIPK1-201ENST00000340480 RAMP3O60896 148 aa6.27□□□□□ -1.41
HIPK1-201ENST00000340480 THBDP07204 575 aa6.27□□□□□ -1.41
HIPK1-201ENST00000340480 ZNF585BQ52M93 769 aa6.27□□□□□ -1.41
HIPK1-201ENST00000340480 C8orf31Q8N9H6 132 aa6.27□□□□□ -1.41
HIPK1-201ENST00000340480 DKK4Q9UBT3 224 aa6.27□□□□□ -1.41
HIPK1-201ENST00000340480 CEP192Q8TEP8 1941 aa6.27□□□□□ -1.41
HIPK1-201ENST00000340480 WT1P19544 449 aaPredicted RBP6.27□□□□□ -1.41
HIPK1-201ENST00000340480 TMEM177Q53S58 311 aa6.27□□□□□ -1.41
HIPK1-201ENST00000340480 TCF24Q7RTU0 167 aa6.27□□□□□ -1.41
HIPK1-201ENST00000340480 KIR3DL3Q8N743 410 aa6.27□□□□□ -1.41
HIPK1-201ENST00000340480 OR5AU1Q8NGC0 362 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms