RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 LGI3Q8N145 548 aa10.95□□□□□ -0.66
ERCC1-203ENST00000340192 OR10C1Q96KK4 312 aa10.95□□□□□ -0.66
ERCC1-203ENST00000340192 SLC25A21Q9BQT8 299 aaPredicted RBP10.95□□□□□ -0.66
ERCC1-203ENST00000340192 FNDC4Q9H6D8 234 aaPredicted RBP10.95□□□□□ -0.66
ERCC1-203ENST00000340192 SHPKQ9UHJ6 478 aa10.95□□□□□ -0.66
ERCC1-203ENST00000340192 OPRK1P41145 380 aa10.94□□□□□ -0.66
ERCC1-203ENST00000340192 BAK1Q16611 211 aa10.94□□□□□ -0.66
ERCC1-203ENST00000340192 LINC00322Q6ZN03 302 aaPredicted RBP10.94□□□□□ -0.66
ERCC1-203ENST00000340192 SRD5A3Q9H8P0 318 aa10.94□□□□□ -0.66
ERCC1-203ENST00000340192 NDUFA13Q9P0J0 144 aa10.94□□□□□ -0.66
ERCC1-203ENST00000340192 CACFD1Q9UGQ2 172 aa10.94□□□□□ -0.66
ERCC1-203ENST00000340192 NBEAL2Q6ZNJ1 2754 aa10.94□□□□□ -0.66
ERCC1-203ENST00000340192 IGHV7-4-1A0A0J9YVY3 117 aa10.93□□□□□ -0.66
ERCC1-203ENST00000340192 RBMY1BA6NDE4 496 aaKnown RBP10.93□□□□□ -0.66
ERCC1-203ENST00000340192 RBMY1EA6NEQ0 496 aaKnown RBP10.93□□□□□ -0.66
ERCC1-203ENST00000340192 TSPAN4O14817 238 aa10.93□□□□□ -0.66
ERCC1-203ENST00000340192 TMEM50AO95807 157 aa10.93□□□□□ -0.66
ERCC1-203ENST00000340192 RBMY1DP0C7P1 496 aaKnown RBP10.93□□□□□ -0.66
ERCC1-203ENST00000340192 VAMP1P23763 118 aa10.93□□□□□ -0.66
ERCC1-203ENST00000340192 INPP1P49441 399 aa10.93□□□□□ -0.66
ERCC1-203ENST00000340192 CCR6P51684 374 aa10.93□□□□□ -0.66
ERCC1-203ENST00000340192 TNFRSF9Q07011 255 aa10.93□□□□□ -0.66
ERCC1-203ENST00000340192 SMCO1Q147U7 214 aa10.93□□□□□ -0.66
ERCC1-203ENST00000340192 MLANAQ16655 118 aa10.93□□□□□ -0.66
ERCC1-203ENST00000340192 C2orf83Q53S99 150 aa10.93□□□□□ -0.66
ERCC1-203ENST00000340192 TRIQKQ629K1 86 aa10.93□□□□□ -0.66
ERCC1-203ENST00000340192 LAMTOR1Q6IAA8 161 aa10.93□□□□□ -0.66
ERCC1-203ENST00000340192 TMEM116Q8NCL8 245 aa10.93□□□□□ -0.66
ERCC1-203ENST00000340192 OR4X1Q8NH49 305 aa10.93□□□□□ -0.66
ERCC1-203ENST00000340192 SPAG8Q99932 426 aaPredicted RBP10.93□□□□□ -0.66
ERCC1-203ENST00000340192 SPATA25Q9BR10 227 aa10.93□□□□□ -0.66
ERCC1-203ENST00000340192 HIPK2Q9H2X6 1198 aa10.93□□□□□ -0.66
ERCC1-203ENST00000340192 MRPL36Q9P0J6 103 aaKnown RBP10.93□□□□□ -0.66
ERCC1-203ENST00000340192 HSPB7Q9UBY9 170 aa10.93□□□□□ -0.66
ERCC1-203ENST00000340192 SMPXQ9UHP9 88 aa10.93□□□□□ -0.66
ERCC1-203ENST00000340192 IGHV3-49A0A0A0MS15 119 aa10.92□□□□□ -0.66
ERCC1-203ENST00000340192 TRAV14DV4A0A0A6YYC5 116 aa10.92□□□□□ -0.66
ERCC1-203ENST00000340192 CHEK1O14757 476 aa10.92□□□□□ -0.66
ERCC1-203ENST00000340192 RBMS2Q15434 407 aaKnown RBP10.92□□□□□ -0.66
ERCC1-203ENST00000340192 TOMM20LQ6UXN7 152 aa10.92□□□□□ -0.66
ERCC1-203ENST00000340192 SLC24A4Q8NFF2 622 aa10.92□□□□□ -0.66
ERCC1-203ENST00000340192 TMEM170AQ8WVE7 144 aa10.92□□□□□ -0.66
ERCC1-203ENST00000340192 RNF2Q99496 336 aa10.92□□□□□ -0.66
ERCC1-203ENST00000340192 SDHCQ99643 169 aaPredicted RBP10.92□□□□□ -0.66
ERCC1-203ENST00000340192 RHPN1-AS1Q9BWJ2 59 aa10.92□□□□□ -0.66
ERCC1-203ENST00000340192 PUS1Q9Y606 427 aaKnown RBP eCLIP10.92□□□□□ -0.66
ERCC1-203ENST00000340192 DNAH7Q8WXX0 4024 aa10.92□□□□□ -0.66
ERCC1-203ENST00000340192 PIGBOS1A0A0B4J2F0 54 aa10.91□□□□□ -0.66
ERCC1-203ENST00000340192 A0A1B0GU03 582 aa10.91□□□□□ -0.66
ERCC1-203ENST00000340192 RPS10-NUDT3A0A1W2PQS6 291 aa10.91□□□□□ -0.66
ERCC1-203ENST00000340192 CLN5O75503 358 aa10.91□□□□□ -0.66
ERCC1-203ENST00000340192 PPP1R1AQ13522 171 aa10.91□□□□□ -0.66
ERCC1-203ENST00000340192 ZNF600Q6ZNG1 722 aa10.91□□□□□ -0.66
ERCC1-203ENST00000340192 CENPSQ8N2Z9 138 aa10.91□□□□□ -0.66
ERCC1-203ENST00000340192 OR1S1Q8NH92 325 aa10.91□□□□□ -0.66
ERCC1-203ENST00000340192 RNASEH2CQ8TDP1 164 aaKnown RBP10.91□□□□□ -0.66
ERCC1-203ENST00000340192 GINS3Q9BRX5 216 aa10.91□□□□□ -0.66
ERCC1-203ENST00000340192 RBKSQ9H477 322 aa10.91□□□□□ -0.66
ERCC1-203ENST00000340192 ZFAND3Q9H8U3 227 aa10.91□□□□□ -0.66
ERCC1-203ENST00000340192 IGHV3OR16-13A0A075B7E8 117 aa10.9□□□□□ -0.66
ERCC1-203ENST00000340192 IGHV3-74A0A0B4J1X5 117 aa10.9□□□□□ -0.66
ERCC1-203ENST00000340192 LINC00854A0A1B0GVQ3 168 aa10.9□□□□□ -0.66
ERCC1-203ENST00000340192 DUXBA0A1W2PPF3 345 aa10.9□□□□□ -0.66
ERCC1-203ENST00000340192 NAP1L6A6NFF2 107 aa10.9□□□□□ -0.66
ERCC1-203ENST00000340192 SFT2D2O95562 160 aa10.9□□□□□ -0.66
ERCC1-203ENST00000340192 NPY1RP25929 384 aa10.9□□□□□ -0.66
ERCC1-203ENST00000340192 LRTM2Q8N967 370 aa10.9□□□□□ -0.66
ERCC1-203ENST00000340192 DTD1Q8TEA8 209 aa10.9□□□□□ -0.66
ERCC1-203ENST00000340192 RETNQ9HD89 108 aa10.9□□□□□ -0.66
ERCC1-203ENST00000340192 UBQLN2Q9UHD9 624 aa10.9□□□□□ -0.66
ERCC1-203ENST00000340192 OR4C46A6NHA9 309 aa10.89□□□□□ -0.67
ERCC1-203ENST00000340192 SCGB2A1O75556 95 aa10.89□□□□□ -0.67
ERCC1-203ENST00000340192 NDUFB6O95139 128 aa10.89□□□□□ -0.67
ERCC1-203ENST00000340192 IFNA10P01566 189 aa10.89□□□□□ -0.67
ERCC1-203ENST00000340192 IGKV1-17P01599 117 aa10.89□□□□□ -0.67
ERCC1-203ENST00000340192 SLC25A4P12235 298 aa10.89□□□□□ -0.67
ERCC1-203ENST00000340192 TIGITQ495A1 244 aa10.89□□□□□ -0.67
ERCC1-203ENST00000340192 PRSS54Q6PEW0 395 aa10.89□□□□□ -0.67
ERCC1-203ENST00000340192 NOXA1Q86UR1 476 aa10.89□□□□□ -0.67
ERCC1-203ENST00000340192 CITED4Q96RK1 184 aa10.89□□□□□ -0.67
ERCC1-203ENST00000340192 U3KQ87 197 aa10.89□□□□□ -0.67
ERCC1-203ENST00000340192 TRAV30A0A087WSZ9 112 aa10.88□□□□□ -0.67
ERCC1-203ENST00000340192 CENPXA8MT69 81 aa10.88□□□□□ -0.67
ERCC1-203ENST00000340192 PITX3O75364 302 aa10.88□□□□□ -0.67
ERCC1-203ENST00000340192 APOHP02749 345 aaPredicted RBP10.88□□□□□ -0.67
ERCC1-203ENST00000340192 SLC25A6P12236 298 aa10.88□□□□□ -0.67
ERCC1-203ENST00000340192 IL7P13232 177 aa10.88□□□□□ -0.67
ERCC1-203ENST00000340192 RND2P52198 227 aa10.88□□□□□ -0.67
ERCC1-203ENST00000340192 UBE2MP61081 183 aaKnown RBP10.88□□□□□ -0.67
ERCC1-203ENST00000340192 ODF3L2Q3SX64 289 aa10.88□□□□□ -0.67
ERCC1-203ENST00000340192 ETFRF1Q6IPR1 90 aa10.88□□□□□ -0.67
ERCC1-203ENST00000340192 ST8SIA2Q92186 375 aa10.88□□□□□ -0.67
ERCC1-203ENST00000340192 FLVCR2Q9UPI3 526 aa10.88□□□□□ -0.67
ERCC1-203ENST00000340192 TMED3Q9Y3Q3 217 aa10.88□□□□□ -0.67
ERCC1-203ENST00000340192 KMT2CQ8NEZ4 4911 aaKnown RBP10.88□□□□□ -0.67
ERCC1-203ENST00000340192 IGKV3-7A0A075B6H7 116 aa10.87□□□□□ -0.67
ERCC1-203ENST00000340192 IGHV3-66A0A0C4DH42 116 aa10.87□□□□□ -0.67
ERCC1-203ENST00000340192 IGLC1P0CG04 106 aa10.87□□□□□ -0.67
ERCC1-203ENST00000340192 NPPCP23582 126 aa10.87□□□□□ -0.67
ERCC1-203ENST00000340192 OR10J1P30954 320 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms