RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 PPIAL4CA0A0B4J2A2 164 aa8.6□□□□□ -1.03
TRAF3IP2-201ENST00000340026 K7EN84 100 aa8.6□□□□□ -1.03
TRAF3IP2-201ENST00000340026 ISLRO14498 428 aa8.6□□□□□ -1.03
TRAF3IP2-201ENST00000340026 SLC25A17O43808 307 aa8.6□□□□□ -1.03
TRAF3IP2-201ENST00000340026 PPIAL4GP0DN37 164 aa8.6□□□□□ -1.03
TRAF3IP2-201ENST00000340026 DTX2Q86UW9 622 aa8.6□□□□□ -1.03
TRAF3IP2-201ENST00000340026 LINC01560Q8TB33 94 aa8.6□□□□□ -1.03
TRAF3IP2-201ENST00000340026 IGF2BP2-AS1Q96M15 143 aa8.6□□□□□ -1.03
TRAF3IP2-201ENST00000340026 HIST1H2BLQ99880 126 aa8.6□□□□□ -1.03
TRAF3IP2-201ENST00000340026 HELTA6NFD8 242 aa8.6□□□□□ -1.03
TRAF3IP2-201ENST00000340026 GGTLC3B5MD39 225 aa8.6□□□□□ -1.03
TRAF3IP2-201ENST00000340026 MYCNOSP40205 109 aa8.6□□□□□ -1.03
TRAF3IP2-201ENST00000340026 KIR3DL3Q8N743 410 aa8.6□□□□□ -1.03
TRAF3IP2-201ENST00000340026 OR5R1Q8NH85 324 aa8.6□□□□□ -1.03
TRAF3IP2-201ENST00000340026 OR2T6Q8NHC8 308 aa8.6□□□□□ -1.03
TRAF3IP2-201ENST00000340026 SGMS2Q8NHU3 365 aa8.6□□□□□ -1.03
TRAF3IP2-201ENST00000340026 GPR61Q9BZJ8 451 aa8.6□□□□□ -1.03
TRAF3IP2-201ENST00000340026 CDC42EP3Q9UKI2 254 aa8.6□□□□□ -1.03
TRAF3IP2-201ENST00000340026 INSIG2Q9Y5U4 225 aa8.6□□□□□ -1.03
TRAF3IP2-201ENST00000340026 F11RQ9Y624 299 aaKnown RBP8.6□□□□□ -1.03
TRAF3IP2-201ENST00000340026 ATMQ13315 3056 aa8.6□□□□□ -1.03
TRAF3IP2-201ENST00000340026 SFTPCP11686 197 aa8.59□□□□□ -1.03
TRAF3IP2-201ENST00000340026 HIST1H1BP16401 226 aaKnown RBP8.59□□□□□ -1.03
TRAF3IP2-201ENST00000340026 PPP1R27Q86WC6 154 aa8.59□□□□□ -1.03
TRAF3IP2-201ENST00000340026 OR1L6Q8NGR2 347 aa8.59□□□□□ -1.03
TRAF3IP2-201ENST00000340026 C22orf15Q8WYQ4 148 aa8.59□□□□□ -1.03
TRAF3IP2-201ENST00000340026 TEX22C9J3V5 150 aa8.59□□□□□ -1.03
TRAF3IP2-201ENST00000340026 RPL19P84098 196 aaKnown RBP8.59□□□□□ -1.03
TRAF3IP2-201ENST00000340026 MLANAQ16655 118 aa8.59□□□□□ -1.03
TRAF3IP2-201ENST00000340026 C10orf113Q5VZT2 155 aa8.59□□□□□ -1.03
TRAF3IP2-201ENST00000340026 PATE2Q6UY27 113 aa8.59□□□□□ -1.03
TRAF3IP2-201ENST00000340026 FAM231DQ6ZW35 169 aa8.59□□□□□ -1.03
TRAF3IP2-201ENST00000340026 NECAP1Q8NC96 275 aa8.59□□□□□ -1.03
TRAF3IP2-201ENST00000340026 V9GYV3 84 aa8.59□□□□□ -1.03
TRAF3IP2-201ENST00000340026 PCP4L1A6NKN8 68 aa8.58□□□□□ -1.04
TRAF3IP2-201ENST00000340026 FAM90A27PA6NNH2 459 aa8.58□□□□□ -1.04
TRAF3IP2-201ENST00000340026 ODF3BA8MYP8 253 aa8.58□□□□□ -1.04
TRAF3IP2-201ENST00000340026 GNG4P50150 75 aa8.58□□□□□ -1.04
TRAF3IP2-201ENST00000340026 CNN1P51911 297 aaKnown RBP8.58□□□□□ -1.04
TRAF3IP2-201ENST00000340026 NPBQ8NG41 125 aa8.58□□□□□ -1.04
TRAF3IP2-201ENST00000340026 NPIPB3Q92617 1050 aa8.58□□□□□ -1.04
TRAF3IP2-201ENST00000340026 FAM122AQ96E09 287 aa8.58□□□□□ -1.04
TRAF3IP2-201ENST00000340026 TIMD4Q96H15 378 aa8.58□□□□□ -1.04
TRAF3IP2-201ENST00000340026 RITA1Q96K30 269 aa8.58□□□□□ -1.04
TRAF3IP2-201ENST00000340026 PACRGQ96M98 296 aaPredicted RBP8.58□□□□□ -1.04
TRAF3IP2-201ENST00000340026 RAXQ9Y2V3 346 aa8.58□□□□□ -1.04
TRAF3IP2-201ENST00000340026 NBEAQ8NFP9 2946 aa8.58□□□□□ -1.04
TRAF3IP2-201ENST00000340026 TLN1Q9Y490 2541 aaKnown RBP8.58□□□□□ -1.04
TRAF3IP2-201ENST00000340026 OOSP1A8MZH6 123 aa8.58□□□□□ -1.04
TRAF3IP2-201ENST00000340026 COX7A2P2O60397 106 aa8.58□□□□□ -1.04
TRAF3IP2-201ENST00000340026 OR7C2O60412 319 aa8.58□□□□□ -1.04
TRAF3IP2-201ENST00000340026 ACTL6BO94805 426 aa8.58□□□□□ -1.04
TRAF3IP2-201ENST00000340026 NDUFA3O95167 84 aa8.58□□□□□ -1.04
TRAF3IP2-201ENST00000340026 IGLV2-8P01709 118 aa8.58□□□□□ -1.04
TRAF3IP2-201ENST00000340026 ESDP10768 282 aa8.58□□□□□ -1.04
TRAF3IP2-201ENST00000340026 LGALS4P56470 323 aa8.58□□□□□ -1.04
TRAF3IP2-201ENST00000340026 CENPWQ5EE01 88 aa8.58□□□□□ -1.04
TRAF3IP2-201ENST00000340026 GFI1BQ5VTD9 330 aa8.58□□□□□ -1.04
TRAF3IP2-201ENST00000340026 PERPQ96FX8 193 aa8.58□□□□□ -1.04
TRAF3IP2-201ENST00000340026 TPSG1Q9NRR2 321 aa8.58□□□□□ -1.04
TRAF3IP2-201ENST00000340026 JOSD1Q15040 202 aaPredicted RBP8.57□□□□□ -1.04
TRAF3IP2-201ENST00000340026 C10orf55Q5SWW7 151 aa8.57□□□□□ -1.04
TRAF3IP2-201ENST00000340026 TPTE2P1Q5T6R2 138 aa8.57□□□□□ -1.04
TRAF3IP2-201ENST00000340026 OR10D4PQ8NGN7 298 aa8.57□□□□□ -1.04
TRAF3IP2-201ENST00000340026 FXYD5Q96DB9 178 aa8.57□□□□□ -1.04
TRAF3IP2-201ENST00000340026 MAP1BP46821 2468 aaKnown RBP8.57□□□□□ -1.04
TRAF3IP2-201ENST00000340026 A0A0U1RQK1 487 aa8.57□□□□□ -1.04
TRAF3IP2-201ENST00000340026 ZNF320A2RRD8 509 aa8.57□□□□□ -1.04
TRAF3IP2-201ENST00000340026 XKRY2A2RUG3 117 aa8.57□□□□□ -1.04
TRAF3IP2-201ENST00000340026 MT-ND6P03923 174 aa8.57□□□□□ -1.04
TRAF3IP2-201ENST00000340026 GATA2P23769 480 aaPredicted RBP8.57□□□□□ -1.04
TRAF3IP2-201ENST00000340026 CRYBB3P26998 211 aa8.57□□□□□ -1.04
TRAF3IP2-201ENST00000340026 MFAP2P55001 183 aa8.57□□□□□ -1.04
TRAF3IP2-201ENST00000340026 SSBP2P81877 361 aaPredicted RBP8.57□□□□□ -1.04
TRAF3IP2-201ENST00000340026 TIGITQ495A1 244 aa8.57□□□□□ -1.04
TRAF3IP2-201ENST00000340026 RASL11AQ6T310 242 aa8.57□□□□□ -1.04
TRAF3IP2-201ENST00000340026 RPEQ96AT9 228 aa8.57□□□□□ -1.04
TRAF3IP2-201ENST00000340026 PAXXQ9BUH6 204 aa8.57□□□□□ -1.04
TRAF3IP2-201ENST00000340026 GNB1LQ9BYB4 327 aa8.57□□□□□ -1.04
TRAF3IP2-201ENST00000340026 ZNF355PQ9NSJ1 428 aa8.57□□□□□ -1.04
TRAF3IP2-201ENST00000340026 KLF12Q9Y4X4 402 aa8.57□□□□□ -1.04
TRAF3IP2-201ENST00000340026 DMXL2Q8TDJ6 3036 aa8.57□□□□□ -1.04
TRAF3IP2-201ENST00000340026 PGPEP1LA6NFU8 196 aa8.56□□□□□ -1.04
TRAF3IP2-201ENST00000340026 C22orf46C9J442 243 aa8.56□□□□□ -1.04
TRAF3IP2-201ENST00000340026 PAX1P15863 534 aa8.56□□□□□ -1.04
TRAF3IP2-201ENST00000340026 PRTN3P24158 256 aa8.56□□□□□ -1.04
TRAF3IP2-201ENST00000340026 CEACAM3P40198 252 aa8.56□□□□□ -1.04
TRAF3IP2-201ENST00000340026 UBE2L3P68036 154 aaKnown RBP8.56□□□□□ -1.04
TRAF3IP2-201ENST00000340026 OR5AU1Q8NGC0 362 aa8.56□□□□□ -1.04
TRAF3IP2-201ENST00000340026 CFHR4Q92496 578 aa8.56□□□□□ -1.04
TRAF3IP2-201ENST00000340026 ZNF48Q96MX3 618 aaPredicted RBP8.56□□□□□ -1.04
TRAF3IP2-201ENST00000340026 TNFRSF19Q9NS68 423 aa8.56□□□□□ -1.04
TRAF3IP2-201ENST00000340026 TRAPPC1Q9Y5R8 145 aa8.56□□□□□ -1.04
TRAF3IP2-201ENST00000340026 PCNX1Q96RV3 2341 aa8.56□□□□□ -1.04
TRAF3IP2-201ENST00000340026 AMBPP02760 352 aa8.56□□□□□ -1.04
TRAF3IP2-201ENST00000340026 GRNP28799 593 aaKnown RBP8.56□□□□□ -1.04
TRAF3IP2-201ENST00000340026 CX3CL1P78423 397 aa8.56□□□□□ -1.04
TRAF3IP2-201ENST00000340026 RPEL1Q2QD12 228 aa8.56□□□□□ -1.04
TRAF3IP2-201ENST00000340026 C4orf17Q53FE4 359 aa8.56□□□□□ -1.04
TRAF3IP2-201ENST00000340026 CHRDL1Q9BU40 450 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms