RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 UBR5O95071 2799 aaPredicted RBP13.16□□□□□ -0.3
LITAF-201ENST00000339430 TNFRSF13BO14836 293 aaPredicted RBP13.16□□□□□ -0.3
LITAF-201ENST00000339430 REG1AP05451 166 aa13.16□□□□□ -0.3
LITAF-201ENST00000339430 USF1P22415 310 aaPredicted RBP13.16□□□□□ -0.3
LITAF-201ENST00000339430 PDLIM4P50479 330 aa13.16□□□□□ -0.3
LITAF-201ENST00000339430 ZNF90Q03938 601 aa13.16□□□□□ -0.3
LITAF-201ENST00000339430 CENPWQ5EE01 88 aa13.16□□□□□ -0.3
LITAF-201ENST00000339430 ZNF430Q9H8G1 570 aaPredicted RBP13.16□□□□□ -0.3
LITAF-201ENST00000339430 SLC25A17O43808 307 aa13.15□□□□□ -0.3
LITAF-201ENST00000339430 GZMBP10144 247 aa13.15□□□□□ -0.3
LITAF-201ENST00000339430 AREGP15514 252 aa13.15□□□□□ -0.3
LITAF-201ENST00000339430 HELTA6NFD8 242 aa13.15□□□□□ -0.3
LITAF-201ENST00000339430 GGTLC3B5MD39 225 aa13.15□□□□□ -0.3
LITAF-201ENST00000339430 ENSAO43768 121 aaKnown RBP13.15□□□□□ -0.3
LITAF-201ENST00000339430 OR5G3P0C626 314 aa13.15□□□□□ -0.3
LITAF-201ENST00000339430 ADMP35318 185 aa13.15□□□□□ -0.3
LITAF-201ENST00000339430 ERVFC1-1P60608 527 aa13.15□□□□□ -0.3
LITAF-201ENST00000339430 JOSD1Q15040 202 aaPredicted RBP13.15□□□□□ -0.3
LITAF-201ENST00000339430 PQLC2Q6ZP29 291 aa13.15□□□□□ -0.3
LITAF-201ENST00000339430 PDPNQ86YL7 162 aa13.15□□□□□ -0.3
LITAF-201ENST00000339430 TGIF2LXQ8IUE1 241 aa13.15□□□□□ -0.3
LITAF-201ENST00000339430 TMEM167AQ8TBQ9 72 aa13.15□□□□□ -0.3
LITAF-201ENST00000339430 TMEM186Q96B77 213 aa13.15□□□□□ -0.3
LITAF-201ENST00000339430 FNDC4Q9H6D8 234 aaPredicted RBP13.15□□□□□ -0.3
LITAF-201ENST00000339430 DCHS2Q6V1P9 2916 aa13.15□□□□□ -0.3
LITAF-201ENST00000339430 LYNX1G3V0Z9 82 aa13.14□□□□□ -0.31
LITAF-201ENST00000339430 IGLV2-23P01705 113 aa13.14□□□□□ -0.31
LITAF-201ENST00000339430 LYNX1P0DP58 116 aa13.14□□□□□ -0.31
LITAF-201ENST00000339430 CBLN1P23435 193 aa13.14□□□□□ -0.31
LITAF-201ENST00000339430 GNG4P50150 75 aa13.14□□□□□ -0.31
LITAF-201ENST00000339430 SUMO1P63165 101 aaKnown RBP13.14□□□□□ -0.31
LITAF-201ENST00000339430 FAM208BQ5VWN6 2430 aa13.14□□□□□ -0.31
LITAF-201ENST00000339430 ST6GALNAC6Q969X2 333 aa13.14□□□□□ -0.31
LITAF-201ENST00000339430 IL36BQ9NZH7 164 aa13.14□□□□□ -0.31
LITAF-201ENST00000339430 WASHC3Q9Y3C0 194 aa13.14□□□□□ -0.31
LITAF-201ENST00000339430 A0A1W2PPR1 153 aa13.14□□□□□ -0.31
LITAF-201ENST00000339430 C9JCJ5 164 aa13.14□□□□□ -0.31
LITAF-201ENST00000339430 FRMD6-AS1P0C7T7 363 aa13.14□□□□□ -0.31
LITAF-201ENST00000339430 APELAP0DMC3 54 aa13.14□□□□□ -0.31
LITAF-201ENST00000339430 TMEM256Q8N2U0 113 aa13.14□□□□□ -0.31
LITAF-201ENST00000339430 RNASEH2CQ8TDP1 164 aaKnown RBP13.14□□□□□ -0.31
LITAF-201ENST00000339430 GRIFINA4D1Z8 144 aa13.13□□□□□ -0.31
LITAF-201ENST00000339430 ZNF705GA8MUZ8 300 aaPredicted RBP13.13□□□□□ -0.31
LITAF-201ENST00000339430 SNRPCP09234 159 aaKnown RBP13.13□□□□□ -0.31
LITAF-201ENST00000339430 C8orf88P0DMB2 117 aa13.13□□□□□ -0.31
LITAF-201ENST00000339430 DLX6P56179 175 aa13.13□□□□□ -0.31
LITAF-201ENST00000339430 ATP5IP56385 69 aaPredicted RBP13.13□□□□□ -0.31
LITAF-201ENST00000339430 TAS2R45P59539 299 aa13.13□□□□□ -0.31
LITAF-201ENST00000339430 NPIPB3Q92617 1050 aa13.13□□□□□ -0.31
LITAF-201ENST00000339430 SLC25A33Q9BSK2 321 aa13.13□□□□□ -0.31
LITAF-201ENST00000339430 IGHV1-69-2A0A0G2JMI3 117 aa13.13□□□□□ -0.31
LITAF-201ENST00000339430 A0A1W2PN81 502 aa13.13□□□□□ -0.31
LITAF-201ENST00000339430 IGHV1-8P0DP01 117 aa13.13□□□□□ -0.31
LITAF-201ENST00000339430 MRPL41Q8IXM3 137 aaKnown RBP13.13□□□□□ -0.31
LITAF-201ENST00000339430 VSTM2AQ8TAG5 236 aa13.13□□□□□ -0.31
LITAF-201ENST00000339430 TMEM18Q96B42 140 aa13.13□□□□□ -0.31
LITAF-201ENST00000339430 BTF3L4Q96K17 158 aa13.13□□□□□ -0.31
LITAF-201ENST00000339430 RNASE7Q9H1E1 156 aaKnown RBP13.13□□□□□ -0.31
LITAF-201ENST00000339430 MRPL36Q9P0J6 103 aaKnown RBP13.13□□□□□ -0.31
LITAF-201ENST00000339430 NUPR1O60356 82 aa13.12□□□□□ -0.31
LITAF-201ENST00000339430 SPINK4O60575 86 aa13.12□□□□□ -0.31
LITAF-201ENST00000339430 DEFA6Q01524 100 aa13.12□□□□□ -0.31
LITAF-201ENST00000339430 FXYD3Q14802 87 aa13.12□□□□□ -0.31
LITAF-201ENST00000339430 TMEM155Q4W5P6 130 aa13.12□□□□□ -0.31
LITAF-201ENST00000339430 OR5R1Q8NH85 324 aa13.12□□□□□ -0.31
LITAF-201ENST00000339430 CACNG8Q8WXS5 425 aa13.12□□□□□ -0.31
LITAF-201ENST00000339430 SLC25A2Q9BXI2 301 aa13.12□□□□□ -0.31
LITAF-201ENST00000339430 UTP20O75691 2785 aaKnown RBP13.12□□□□□ -0.31
LITAF-201ENST00000339430 PYYP10082 97 aa13.12□□□□□ -0.31
LITAF-201ENST00000339430 GPX4P36969 197 aaPredicted RBP13.12□□□□□ -0.31
LITAF-201ENST00000339430 SRSF1Q07955 248 aaKnown RBP eCLIP13.12□□□□□ -0.31
LITAF-201ENST00000339430 C19orf35Q6ZS72 473 aa13.12□□□□□ -0.31
LITAF-201ENST00000339430 LINC00311Q8N616 119 aa13.12□□□□□ -0.31
LITAF-201ENST00000339430 V9GYV3 84 aa13.12□□□□□ -0.31
LITAF-201ENST00000339430 LRRK2Q5S007 2527 aa13.11□□□□□ -0.31
LITAF-201ENST00000339430 A0A1W2PPI3 338 aa13.11□□□□□ -0.31
LITAF-201ENST00000339430 PSMB11A5LHX3 300 aa13.11□□□□□ -0.31
LITAF-201ENST00000339430 A6NNC1 897 aa13.11□□□□□ -0.31
LITAF-201ENST00000339430 PKIAP61925 76 aa13.11□□□□□ -0.31
LITAF-201ENST00000339430 UBE2L3P68036 154 aaKnown RBP13.11□□□□□ -0.31
LITAF-201ENST00000339430 RPEL1Q2QD12 228 aa13.11□□□□□ -0.31
LITAF-201ENST00000339430 ASPHD1Q5U4P2 390 aa13.11□□□□□ -0.31
LITAF-201ENST00000339430 RUSC1-AS1Q66K80 236 aa13.11□□□□□ -0.31
LITAF-201ENST00000339430 HCP5Q6MZN7 132 aa13.11□□□□□ -0.31
LITAF-201ENST00000339430 MMD2Q8IY49 270 aa13.11□□□□□ -0.31
LITAF-201ENST00000339430 OR8I2Q8N0Y5 310 aa13.11□□□□□ -0.31
LITAF-201ENST00000339430 GBGT1Q8N5D6 347 aa13.11□□□□□ -0.31
LITAF-201ENST00000339430 OR5AU1Q8NGC0 362 aa13.11□□□□□ -0.31
LITAF-201ENST00000339430 ZNF596Q8TC21 504 aa13.11□□□□□ -0.31
LITAF-201ENST00000339430 FAM167A-AS1Q96KT0 104 aa13.11□□□□□ -0.31
LITAF-201ENST00000339430 CHODLQ9H9P2 273 aa13.11□□□□□ -0.31
LITAF-201ENST00000339430 DNAJC4Q9NNZ3 241 aa13.11□□□□□ -0.31
LITAF-201ENST00000339430 TSTD3H0UI37 97 aa13.1□□□□□ -0.31
LITAF-201ENST00000339430 COX7A2P2O60397 106 aa13.1□□□□□ -0.31
LITAF-201ENST00000339430 CNTFRP26992 372 aa13.1□□□□□ -0.31
LITAF-201ENST00000339430 LGALS4P56470 323 aa13.1□□□□□ -0.31
LITAF-201ENST00000339430 DNLZQ5SXM8 178 aa13.1□□□□□ -0.31
LITAF-201ENST00000339430 LHFPL4Q7Z7J7 247 aa13.1□□□□□ -0.31
LITAF-201ENST00000339430 C11orf42Q8N5U0 333 aa13.1□□□□□ -0.31
LITAF-201ENST00000339430 NHLRC2Q8NBF2 726 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms