RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 ZNF182P17025 639 aaPredicted RBP11.42□□□□□ -0.58
LINC01116-202ENST00000339037 PRCDQ00LT1 54 aa11.42□□□□□ -0.58
LINC01116-202ENST00000339037 TMEM187Q14656 261 aa11.42□□□□□ -0.58
LINC01116-202ENST00000339037 RNASE10Q5GAN6 216 aaKnown RBP11.42□□□□□ -0.58
LINC01116-202ENST00000339037 ZNF114Q8NC26 417 aa11.42□□□□□ -0.58
LINC01116-202ENST00000339037 OR4A16Q8NH70 328 aa11.42□□□□□ -0.58
LINC01116-202ENST00000339037 AP3S1Q92572 193 aa11.42□□□□□ -0.58
LINC01116-202ENST00000339037 PINX1Q96BK5 328 aaKnown RBP11.42□□□□□ -0.58
LINC01116-202ENST00000339037 ABHD1Q96SE0 405 aa11.42□□□□□ -0.58
LINC01116-202ENST00000339037 DNAH2Q9P225 4427 aa11.42□□□□□ -0.58
LINC01116-202ENST00000339037 ST8SIA3O43173 380 aa11.41□□□□□ -0.58
LINC01116-202ENST00000339037 IGKV1-5P01602 117 aa11.41□□□□□ -0.58
LINC01116-202ENST00000339037 PGAM2P15259 253 aa11.41□□□□□ -0.58
LINC01116-202ENST00000339037 PPP5CP53041 499 aa11.41□□□□□ -0.58
LINC01116-202ENST00000339037 RND3P61587 244 aa11.41□□□□□ -0.58
LINC01116-202ENST00000339037 SPINK9Q5DT21 86 aa11.41□□□□□ -0.58
LINC01116-202ENST00000339037 OR4D10Q8NGI6 311 aa11.41□□□□□ -0.58
LINC01116-202ENST00000339037 ST8SIA2Q92186 375 aa11.41□□□□□ -0.58
LINC01116-202ENST00000339037 TP53RKQ96S44 253 aa11.41□□□□□ -0.58
LINC01116-202ENST00000339037 MS4A6AQ9H2W1 248 aa11.41□□□□□ -0.58
LINC01116-202ENST00000339037 MIXL1Q9H2W2 232 aa11.41□□□□□ -0.58
LINC01116-202ENST00000339037 MTFP1Q9UDX5 166 aa11.41□□□□□ -0.58
LINC01116-202ENST00000339037 DNASE2O00115 360 aaPredicted RBP11.4□□□□□ -0.58
LINC01116-202ENST00000339037 DFFBO76075 338 aa11.4□□□□□ -0.58
LINC01116-202ENST00000339037 PIGPP57054 158 aa11.4□□□□□ -0.58
LINC01116-202ENST00000339037 DEFB131AP59861 70 aa11.4□□□□□ -0.58
LINC01116-202ENST00000339037 RPL11P62913 178 aaKnown RBP11.4□□□□□ -0.58
LINC01116-202ENST00000339037 LEMD1Q68G75 181 aa11.4□□□□□ -0.58
LINC01116-202ENST00000339037 TOMM20LQ6UXN7 152 aa11.4□□□□□ -0.58
LINC01116-202ENST00000339037 ARRDC1Q8N5I2 433 aa11.4□□□□□ -0.58
LINC01116-202ENST00000339037 ZNF486Q96H40 463 aaPredicted RBP11.4□□□□□ -0.58
LINC01116-202ENST00000339037 VSIRQ9H7M9 311 aa11.4□□□□□ -0.58
LINC01116-202ENST00000339037 IGHV3-66A0A0C4DH42 116 aa11.39□□□□□ -0.59
LINC01116-202ENST00000339037 IGLL5B9A064 214 aa11.39□□□□□ -0.59
LINC01116-202ENST00000339037 C11orf94C9JXX5 98 aa11.39□□□□□ -0.59
LINC01116-202ENST00000339037 P0C879 139 aa11.39□□□□□ -0.59
LINC01116-202ENST00000339037 NPBWR1P48145 328 aa11.39□□□□□ -0.59
LINC01116-202ENST00000339037 HSPE1P61604 102 aaKnown RBP11.39□□□□□ -0.59
LINC01116-202ENST00000339037 TRAV2A0A0B4J234 112 aa11.38□□□□□ -0.59
LINC01116-202ENST00000339037 APOHP02749 345 aaPredicted RBP11.38□□□□□ -0.59
LINC01116-202ENST00000339037 CD74P04233 296 aa11.38□□□□□ -0.59
LINC01116-202ENST00000339037 TBPP20226 339 aa11.38□□□□□ -0.59
LINC01116-202ENST00000339037 AKR1C2P52895 323 aa11.38□□□□□ -0.59
LINC01116-202ENST00000339037 ERHP84090 104 aaKnown RBP11.38□□□□□ -0.59
LINC01116-202ENST00000339037 SPCS2Q15005 226 aa11.38□□□□□ -0.59
LINC01116-202ENST00000339037 STHQ8IWL8 128 aa11.38□□□□□ -0.59
LINC01116-202ENST00000339037 LILRB2Q8N423 598 aa11.38□□□□□ -0.59
LINC01116-202ENST00000339037 Q8NAQ8 132 aa11.38□□□□□ -0.59
LINC01116-202ENST00000339037 MRPS26Q9BYN8 205 aaKnown RBP11.38□□□□□ -0.59
LINC01116-202ENST00000339037 HRH4Q9H3N8 390 aa11.38□□□□□ -0.59
LINC01116-202ENST00000339037 APLNQ9ULZ1 77 aa11.38□□□□□ -0.59
LINC01116-202ENST00000339037 PUS1Q9Y606 427 aaKnown RBP eCLIP11.38□□□□□ -0.59
LINC01116-202ENST00000339037 A0A0B4J293 547 aa11.37□□□□□ -0.59
LINC01116-202ENST00000339037 C3orf85A0A1B0GTC6 90 aa11.37□□□□□ -0.59
LINC01116-202ENST00000339037 ALDH3B2P48448 385 aa11.37□□□□□ -0.59
LINC01116-202ENST00000339037 SP6Q3SY56 376 aa11.37□□□□□ -0.59
LINC01116-202ENST00000339037 SCGB2B2Q4G0G5 96 aa11.37□□□□□ -0.59
LINC01116-202ENST00000339037 FAAP20Q6NZ36 180 aa11.37□□□□□ -0.59
LINC01116-202ENST00000339037 ZNF600Q6ZNG1 722 aa11.37□□□□□ -0.59
LINC01116-202ENST00000339037 FAM24BQ8N5W8 94 aa11.37□□□□□ -0.59
LINC01116-202ENST00000339037 TMEM229BQ8NBD8 167 aa11.37□□□□□ -0.59
LINC01116-202ENST00000339037 DUSP18Q8NEJ0 188 aa11.37□□□□□ -0.59
LINC01116-202ENST00000339037 OR13C8Q8NGS7 320 aa11.37□□□□□ -0.59
LINC01116-202ENST00000339037 MARCH1Q8TCQ1 289 aa11.37□□□□□ -0.59
LINC01116-202ENST00000339037 TMEM231Q9H6L2 316 aa11.37□□□□□ -0.59
LINC01116-202ENST00000339037 RABAC1Q9UI14 185 aa11.37□□□□□ -0.59
LINC01116-202ENST00000339037 IGHV4-28A0A0C4DH34 117 aa11.36□□□□□ -0.59
LINC01116-202ENST00000339037 A0A0G2JRQ6 117 aa11.36□□□□□ -0.59
LINC01116-202ENST00000339037 GABARAPH6UMI1 98 aa11.36□□□□□ -0.59
LINC01116-202ENST00000339037 CTDSP2O14595 271 aa11.36□□□□□ -0.59
LINC01116-202ENST00000339037 RGS5O15539 181 aa11.36□□□□□ -0.59
LINC01116-202ENST00000339037 RAB3DO95716 219 aa11.36□□□□□ -0.59
LINC01116-202ENST00000339037 SNCAP37840 140 aa11.36□□□□□ -0.59
LINC01116-202ENST00000339037 TAS2R19P59542 299 aa11.36□□□□□ -0.59
LINC01116-202ENST00000339037 TMEM41BQ5BJD5 291 aa11.36□□□□□ -0.59
LINC01116-202ENST00000339037 STEAP1BQ6NZ63 245 aa11.36□□□□□ -0.59
LINC01116-202ENST00000339037 GPR141Q7Z602 305 aa11.36□□□□□ -0.59
LINC01116-202ENST00000339037 SLC35G3Q8N808 338 aa11.36□□□□□ -0.59
LINC01116-202ENST00000339037 TERB2Q8NHR7 220 aa11.36□□□□□ -0.59
LINC01116-202ENST00000339037 COPZ2Q9P299 210 aa11.36□□□□□ -0.59
LINC01116-202ENST00000339037 A0A1B0GU03 582 aa11.35□□□□□ -0.59
LINC01116-202ENST00000339037 MIFP14174 115 aa11.35□□□□□ -0.59
LINC01116-202ENST00000339037 UCP1P25874 307 aa11.35□□□□□ -0.59
LINC01116-202ENST00000339037 HLA-DMBP28068 263 aa11.35□□□□□ -0.59
LINC01116-202ENST00000339037 TRIM16LQ309B1 348 aa11.35□□□□□ -0.59
LINC01116-202ENST00000339037 CENPSQ8N2Z9 138 aa11.35□□□□□ -0.59
LINC01116-202ENST00000339037 CCDC71LQ8N9Z2 235 aa11.35□□□□□ -0.59
LINC01116-202ENST00000339037 ZFAND1Q8TCF1 268 aa11.35□□□□□ -0.59
LINC01116-202ENST00000339037 C15orf40Q8WUR7 153 aa11.35□□□□□ -0.59
LINC01116-202ENST00000339037 AGRNO00468 2067 aa11.35□□□□□ -0.59
LINC01116-202ENST00000339037 DNAH17Q9UFH2 4485 aa11.35□□□□□ -0.59
LINC01116-202ENST00000339037 A0A1W2PS18 150 aa11.34□□□□□ -0.59
LINC01116-202ENST00000339037 INS-IGF2F8WCM5 200 aa11.34□□□□□ -0.59
LINC01116-202ENST00000339037 IFNA17P01571 189 aa11.34□□□□□ -0.59
LINC01116-202ENST00000339037 GIG44P09565 113 aaPredicted RBP11.34□□□□□ -0.59
LINC01116-202ENST00000339037 RBMY1A1P0DJD3 496 aaKnown RBP11.34□□□□□ -0.59
LINC01116-202ENST00000339037 RBMY1CP0DJD4 496 aa11.34□□□□□ -0.59
LINC01116-202ENST00000339037 SPP1P10451 314 aa11.34□□□□□ -0.59
LINC01116-202ENST00000339037 NPPCP23582 126 aa11.34□□□□□ -0.59
LINC01116-202ENST00000339037 ETV6P41212 452 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms