RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 ZPBPQ9BS86 351 aa11.61□□□□□ -0.55
PCDH8-201ENST00000338862 JPT1Q9UK76 154 aa11.61□□□□□ -0.55
PCDH8-201ENST00000338862 CEP192Q8TEP8 1941 aa11.61□□□□□ -0.55
PCDH8-201ENST00000338862 KMT2EQ8IZD2 1858 aa11.61□□□□□ -0.55
PCDH8-201ENST00000338862 BMPR1BO00238 502 aa11.61□□□□□ -0.55
PCDH8-201ENST00000338862 HYPMO75409 117 aa11.61□□□□□ -0.55
PCDH8-201ENST00000338862 HTR1DP28221 377 aa11.61□□□□□ -0.55
PCDH8-201ENST00000338862 C11orf53Q8IXP5 236 aa11.61□□□□□ -0.55
PCDH8-201ENST00000338862 ZNF738Q8NE65 137 aa11.61□□□□□ -0.55
PCDH8-201ENST00000338862 OR8B3Q8NGG8 313 aa11.61□□□□□ -0.55
PCDH8-201ENST00000338862 OR1L4Q8NGR5 311 aa11.61□□□□□ -0.55
PCDH8-201ENST00000338862 PRNDQ9UKY0 176 aa11.61□□□□□ -0.55
PCDH8-201ENST00000338862 ZFHX4Q86UP3 3567 aa11.61□□□□□ -0.55
PCDH8-201ENST00000338862 ISLRO14498 428 aa11.6□□□□□ -0.55
PCDH8-201ENST00000338862 COL8A1P27658 744 aa11.6□□□□□ -0.55
PCDH8-201ENST00000338862 FXYD7P58549 80 aa11.6□□□□□ -0.55
PCDH8-201ENST00000338862 DNLZQ5SXM8 178 aa11.6□□□□□ -0.55
PCDH8-201ENST00000338862 PRNTQ86SH4 94 aa11.6□□□□□ -0.55
PCDH8-201ENST00000338862 V9GYV3 84 aa11.6□□□□□ -0.55
PCDH8-201ENST00000338862 TRAV8-1A0A0A6YYK1 113 aa11.6□□□□□ -0.55
PCDH8-201ENST00000338862 KIR2DL5BA0A0G2JN68 375 aa11.6□□□□□ -0.55
PCDH8-201ENST00000338862 KIR2DL5BA0A0G2JPC4 375 aa11.6□□□□□ -0.55
PCDH8-201ENST00000338862 SAA1P0DJI8 122 aaPredicted RBP11.6□□□□□ -0.55
PCDH8-201ENST00000338862 KIR2DL5AQ8N109 375 aa11.6□□□□□ -0.55
PCDH8-201ENST00000338862 OR52E5Q8NH55 327 aa11.6□□□□□ -0.55
PCDH8-201ENST00000338862 TSKUQ8WUA8 353 aa11.6□□□□□ -0.55
PCDH8-201ENST00000338862 P01737 135 aa11.6□□□□□ -0.55
PCDH8-201ENST00000338862 TMEM177Q53S58 311 aa11.6□□□□□ -0.55
PCDH8-201ENST00000338862 IDI2-AS1Q9NZ38 188 aa11.6□□□□□ -0.55
PCDH8-201ENST00000338862 CFAP47Q6ZTR5 3102 aa11.59□□□□□ -0.55
PCDH8-201ENST00000338862 CNIH1O95406 144 aa11.59□□□□□ -0.55
PCDH8-201ENST00000338862 MT-ND6P03923 174 aa11.59□□□□□ -0.55
PCDH8-201ENST00000338862 COX7A1P24310 79 aa11.59□□□□□ -0.55
PCDH8-201ENST00000338862 VDAC2P45880 294 aaPredicted RBP11.59□□□□□ -0.55
PCDH8-201ENST00000338862 LINC00305Q7Z4B0 112 aa11.59□□□□□ -0.55
PCDH8-201ENST00000338862 WFDC3Q8IUB2 231 aa11.59□□□□□ -0.55
PCDH8-201ENST00000338862 OR8A1Q8NGG7 326 aa11.59□□□□□ -0.55
PCDH8-201ENST00000338862 PARD6GQ9BYG4 376 aaPredicted RBP11.59□□□□□ -0.55
PCDH8-201ENST00000338862 IFI27L2Q9H2X8 130 aa11.59□□□□□ -0.55
PCDH8-201ENST00000338862 SPAARA0A1B0GVQ0 90 aa11.59□□□□□ -0.55
PCDH8-201ENST00000338862 BPIFB3P59826 476 aa11.59□□□□□ -0.55
PCDH8-201ENST00000338862 SSBP2P81877 361 aaPredicted RBP11.59□□□□□ -0.55
PCDH8-201ENST00000338862 MRPL20Q9BYC9 149 aaKnown RBP11.59□□□□□ -0.55
PCDH8-201ENST00000338862 DYNLRB1Q9NP97 96 aa11.59□□□□□ -0.55
PCDH8-201ENST00000338862 SPG11Q96JI7 2443 aa11.59□□□□□ -0.55
PCDH8-201ENST00000338862 CA7P43166 264 aa11.59□□□□□ -0.55
PCDH8-201ENST00000338862 YPEL3P61236 119 aaPredicted RBP11.59□□□□□ -0.55
PCDH8-201ENST00000338862 CENPVQ7Z7K6 275 aaPredicted RBP11.59□□□□□ -0.55
PCDH8-201ENST00000338862 TXNDC17Q9BRA2 123 aa11.59□□□□□ -0.55
PCDH8-201ENST00000338862 RNF7Q9UBF6 113 aa11.59□□□□□ -0.55
PCDH8-201ENST00000338862 MRPS18CQ9Y3D5 142 aaKnown RBP11.59□□□□□ -0.55
PCDH8-201ENST00000338862 IGHV1-18A0A0C4DH31 117 aa11.58□□□□□ -0.56
PCDH8-201ENST00000338862 OR4C46A6NHA9 309 aa11.58□□□□□ -0.56
PCDH8-201ENST00000338862 FAM27E3Q08E93 113 aa11.58□□□□□ -0.56
PCDH8-201ENST00000338862 C1orf229Q6ZS94 237 aaPredicted RBP11.58□□□□□ -0.56
PCDH8-201ENST00000338862 LEPROTL1O95214 131 aa11.58□□□□□ -0.56
PCDH8-201ENST00000338862 CX3CL1P78423 397 aa11.58□□□□□ -0.56
PCDH8-201ENST00000338862 SP5Q6BEB4 398 aaPredicted RBP11.58□□□□□ -0.56
PCDH8-201ENST00000338862 TMEM116Q8NCL8 245 aa11.58□□□□□ -0.56
PCDH8-201ENST00000338862 NUDT10Q8NFP7 164 aa11.58□□□□□ -0.56
PCDH8-201ENST00000338862 NUDT11Q96G61 164 aa11.58□□□□□ -0.56
PCDH8-201ENST00000338862 IGHV3OR16-8A0A075B7F1 116 aa11.58□□□□□ -0.56
PCDH8-201ENST00000338862 SRRM4A7MD48 611 aaKnown RBP11.58□□□□□ -0.56
PCDH8-201ENST00000338862 C21orf140B9A014 251 aa11.58□□□□□ -0.56
PCDH8-201ENST00000338862 KIR2DL2P43627 348 aaPredicted RBP11.58□□□□□ -0.56
PCDH8-201ENST00000338862 TMEM136Q6ZRR5 245 aa11.58□□□□□ -0.56
PCDH8-201ENST00000338862 UBALD2Q8IYN6 164 aa11.58□□□□□ -0.56
PCDH8-201ENST00000338862 RPRMLQ8N4K4 120 aa11.58□□□□□ -0.56
PCDH8-201ENST00000338862 PRSS3P2Q8NHM4 247 aa11.58□□□□□ -0.56
PCDH8-201ENST00000338862 GNB1LQ9BYB4 327 aa11.58□□□□□ -0.56
PCDH8-201ENST00000338862 IGHV3-35A0A0C4DH35 117 aa11.57□□□□□ -0.56
PCDH8-201ENST00000338862 FBLL1A6NHQ2 334 aaKnown RBP11.57□□□□□ -0.56
PCDH8-201ENST00000338862 MPV17L2Q567V2 206 aa11.57□□□□□ -0.56
PCDH8-201ENST00000338862 RAB37Q96AX2 223 aa11.57□□□□□ -0.56
PCDH8-201ENST00000338862 CEP295Q9C0D2 2601 aa11.57□□□□□ -0.56
PCDH8-201ENST00000338862 TBR1Q16650 682 aa11.57□□□□□ -0.56
PCDH8-201ENST00000338862 OR1L8Q8NGR8 309 aa11.57□□□□□ -0.56
PCDH8-201ENST00000338862 RAB1CQ92928 201 aa11.57□□□□□ -0.56
PCDH8-201ENST00000338862 C20orf144Q9BQM9 153 aa11.57□□□□□ -0.56
PCDH8-201ENST00000338862 GP6Q9HCN6 339 aa11.57□□□□□ -0.56
PCDH8-201ENST00000338862 RALYQ9UKM9 306 aaKnown RBP11.57□□□□□ -0.56
PCDH8-201ENST00000338862 TEX50A0A1B0GTY4 177 aa11.57□□□□□ -0.56
PCDH8-201ENST00000338862 C15orf65H3BRN8 121 aa11.57□□□□□ -0.56
PCDH8-201ENST00000338862 SUB1P53999 127 aaKnown RBP eCLIP11.57□□□□□ -0.56
PCDH8-201ENST00000338862 TEX43Q6ZNM6 134 aa11.57□□□□□ -0.56
PCDH8-201ENST00000338862 RAB9BQ9NP90 201 aa11.57□□□□□ -0.56
PCDH8-201ENST00000338862 ZFP30Q9Y2G7 519 aa11.57□□□□□ -0.56
PCDH8-201ENST00000338862 DMXL2Q8TDJ6 3036 aa11.56□□□□□ -0.56
PCDH8-201ENST00000338862 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.56□□□□□ -0.56
PCDH8-201ENST00000338862 PEX7O00628 323 aa11.56□□□□□ -0.56
PCDH8-201ENST00000338862 TM4SF20Q53R12 229 aa11.56□□□□□ -0.56
PCDH8-201ENST00000338862 FAM90A1Q86YD7 464 aa11.56□□□□□ -0.56
PCDH8-201ENST00000338862 DEFB123Q8N688 67 aa11.56□□□□□ -0.56
PCDH8-201ENST00000338862 NUP35Q8NFH5 326 aa11.56□□□□□ -0.56
PCDH8-201ENST00000338862 ASCL3Q9NQ33 180 aa11.56□□□□□ -0.56
PCDH8-201ENST00000338862 KBTBD11-OT1A0A1B0GTJ5 212 aa11.56□□□□□ -0.56
PCDH8-201ENST00000338862 YPEL1O60688 119 aa11.56□□□□□ -0.56
PCDH8-201ENST00000338862 IGLC2P0DOY2 106 aa11.56□□□□□ -0.56
PCDH8-201ENST00000338862 IGLC3P0DOY3 106 aa11.56□□□□□ -0.56
PCDH8-201ENST00000338862 HIST1H1EP10412 219 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms