RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 TRIQKQ629K1 86 aa11.44□□□□□ -0.58
PRKN-201ENST00000338468 LRTM2Q8N967 370 aa11.44□□□□□ -0.58
PRKN-201ENST00000338468 MUC7Q8TAX7 377 aa11.44□□□□□ -0.58
PRKN-201ENST00000338468 OR10C1Q96KK4 312 aa11.44□□□□□ -0.58
PRKN-201ENST00000338468 C20orf24Q9BUV8 137 aa11.44□□□□□ -0.58
PRKN-201ENST00000338468 HEYLQ9NQ87 328 aaPredicted RBP11.44□□□□□ -0.58
PRKN-201ENST00000338468 HSPB7Q9UBY9 170 aa11.44□□□□□ -0.58
PRKN-201ENST00000338468 RYR2Q92736 4967 aa11.43□□□□□ -0.58
PRKN-201ENST00000338468 LINC00854A0A1B0GVQ3 168 aa11.43□□□□□ -0.58
PRKN-201ENST00000338468 C15orf62A8K5M9 175 aa11.43□□□□□ -0.58
PRKN-201ENST00000338468 CEBPZOSA8MTT3 80 aa11.43□□□□□ -0.58
PRKN-201ENST00000338468 CORTO00230 105 aa11.43□□□□□ -0.58
PRKN-201ENST00000338468 GNG7O60262 68 aa11.43□□□□□ -0.58
PRKN-201ENST00000338468 PITX3O75364 302 aa11.43□□□□□ -0.58
PRKN-201ENST00000338468 SCAF4O95104 1147 aaKnown RBP11.43□□□□□ -0.58
PRKN-201ENST00000338468 NDUFB6O95139 128 aa11.43□□□□□ -0.58
PRKN-201ENST00000338468 SFT2D2O95562 160 aa11.43□□□□□ -0.58
PRKN-201ENST00000338468 TMEM50AO95807 157 aa11.43□□□□□ -0.58
PRKN-201ENST00000338468 VAMP1P23763 118 aa11.43□□□□□ -0.58
PRKN-201ENST00000338468 HTR2BP41595 481 aa11.43□□□□□ -0.58
PRKN-201ENST00000338468 RELQ04864 619 aaPredicted RBP11.43□□□□□ -0.58
PRKN-201ENST00000338468 TNFRSF9Q07011 255 aa11.43□□□□□ -0.58
PRKN-201ENST00000338468 C2orf83Q53S99 150 aa11.43□□□□□ -0.58
PRKN-201ENST00000338468 LINC00322Q6ZN03 302 aaPredicted RBP11.43□□□□□ -0.58
PRKN-201ENST00000338468 CENPSQ8N2Z9 138 aa11.43□□□□□ -0.58
PRKN-201ENST00000338468 DUSP18Q8NEJ0 188 aa11.43□□□□□ -0.58
PRKN-201ENST00000338468 TM2D3Q9BRN9 247 aa11.43□□□□□ -0.58
PRKN-201ENST00000338468 FLVCR2Q9UPI3 526 aa11.43□□□□□ -0.58
PRKN-201ENST00000338468 DNAH7Q8WXX0 4024 aa11.43□□□□□ -0.58
PRKN-201ENST00000338468 TRAV25A0A0B4J276 109 aa11.42□□□□□ -0.58
PRKN-201ENST00000338468 A0A1B0GU03 582 aa11.42□□□□□ -0.58
PRKN-201ENST00000338468 DUXBA0A1W2PPF3 345 aa11.42□□□□□ -0.58
PRKN-201ENST00000338468 NAP1L6A6NFF2 107 aa11.42□□□□□ -0.58
PRKN-201ENST00000338468 OPRK1P41145 380 aa11.42□□□□□ -0.58
PRKN-201ENST00000338468 NPBWR1P48145 328 aa11.42□□□□□ -0.58
PRKN-201ENST00000338468 TOMM20LQ6UXN7 152 aa11.42□□□□□ -0.58
PRKN-201ENST00000338468 DEFB125Q8N687 156 aa11.42□□□□□ -0.58
PRKN-201ENST00000338468 SLC24A4Q8NFF2 622 aa11.42□□□□□ -0.58
PRKN-201ENST00000338468 RBKSQ9H477 322 aa11.42□□□□□ -0.58
PRKN-201ENST00000338468 SMPXQ9UHP9 88 aa11.42□□□□□ -0.58
PRKN-201ENST00000338468 EPPK1P58107 5090 aaKnown RBP11.41□□□□□ -0.58
PRKN-201ENST00000338468 A6NHS1 94 aa11.41□□□□□ -0.58
PRKN-201ENST00000338468 PLA2G10O15496 165 aa11.41□□□□□ -0.58
PRKN-201ENST00000338468 CLN5O75503 358 aa11.41□□□□□ -0.58
PRKN-201ENST00000338468 YIF1AO95070 293 aa11.41□□□□□ -0.58
PRKN-201ENST00000338468 INPP1P49441 399 aa11.41□□□□□ -0.58
PRKN-201ENST00000338468 HAGHQ16775 308 aa11.41□□□□□ -0.58
PRKN-201ENST00000338468 OR4X1Q8NH49 305 aa11.41□□□□□ -0.58
PRKN-201ENST00000338468 ZFAND3Q9H8U3 227 aa11.41□□□□□ -0.58
PRKN-201ENST00000338468 CACFD1Q9UGQ2 172 aa11.41□□□□□ -0.58
PRKN-201ENST00000338468 IGHV3-49A0A0A0MS15 119 aa11.4□□□□□ -0.58
PRKN-201ENST00000338468 IGHV7-4-1A0A0J9YVY3 117 aa11.4□□□□□ -0.58
PRKN-201ENST00000338468 RBMY1BA6NDE4 496 aaKnown RBP11.4□□□□□ -0.58
PRKN-201ENST00000338468 RBMY1EA6NEQ0 496 aaKnown RBP11.4□□□□□ -0.58
PRKN-201ENST00000338468 OR11H12B2RN74 326 aa11.4□□□□□ -0.58
PRKN-201ENST00000338468 CHEK1O14757 476 aa11.4□□□□□ -0.58
PRKN-201ENST00000338468 TSPAN4O14817 238 aa11.4□□□□□ -0.58
PRKN-201ENST00000338468 IGKV1-17P01599 117 aa11.4□□□□□ -0.58
PRKN-201ENST00000338468 RBMY1DP0C7P1 496 aaKnown RBP11.4□□□□□ -0.58
PRKN-201ENST00000338468 NPY1RP25929 384 aa11.4□□□□□ -0.58
PRKN-201ENST00000338468 UBE2MP61081 183 aaKnown RBP11.4□□□□□ -0.58
PRKN-201ENST00000338468 PRSS54Q6PEW0 395 aa11.4□□□□□ -0.58
PRKN-201ENST00000338468 RNASEH2CQ8TDP1 164 aaKnown RBP11.4□□□□□ -0.58
PRKN-201ENST00000338468 DTD1Q8TEA8 209 aa11.4□□□□□ -0.58
PRKN-201ENST00000338468 RCHY1Q96PM5 261 aa11.4□□□□□ -0.58
PRKN-201ENST00000338468 TUBA4BQ9H853 241 aa11.4□□□□□ -0.58
PRKN-201ENST00000338468 PUS1Q9Y606 427 aaKnown RBP eCLIP11.4□□□□□ -0.589e-8■■■■■ 35.6
PRKN-201ENST00000338468 C9orf170A2RU37 121 aa11.39□□□□□ -0.59
PRKN-201ENST00000338468 SLC25A6P12236 298 aa11.39□□□□□ -0.59
PRKN-201ENST00000338468 ZNF600Q6ZNG1 722 aa11.39□□□□□ -0.59
PRKN-201ENST00000338468 RBPMS2Q6ZRY4 209 aaKnown RBP11.39□□□□□ -0.59
PRKN-201ENST00000338468 TMEM116Q8NCL8 245 aa11.39□□□□□ -0.59
PRKN-201ENST00000338468 OR52B4Q8NGK2 314 aa11.39□□□□□ -0.59
PRKN-201ENST00000338468 OR1S1Q8NH92 325 aa11.39□□□□□ -0.59
PRKN-201ENST00000338468 RNF2Q99496 336 aa11.39□□□□□ -0.59
PRKN-201ENST00000338468 C7orf50Q9BRJ6 194 aaKnown RBP11.39□□□□□ -0.59
PRKN-201ENST00000338468 RHPN1-AS1Q9BWJ2 59 aa11.39□□□□□ -0.59
PRKN-201ENST00000338468 HIPK2Q9H2X6 1198 aa11.39□□□□□ -0.59
PRKN-201ENST00000338468 BIRC6Q9NR09 4857 aa11.39□□□□□ -0.59
PRKN-201ENST00000338468 IGHV3OR16-13A0A075B7E8 117 aa11.38□□□□□ -0.59
PRKN-201ENST00000338468 TRAV14DV4A0A0A6YYC5 116 aa11.38□□□□□ -0.59
PRKN-201ENST00000338468 IGHV3-74A0A0B4J1X5 117 aa11.38□□□□□ -0.59
PRKN-201ENST00000338468 PIGBOS1A0A0B4J2F0 54 aa11.38□□□□□ -0.59
PRKN-201ENST00000338468 LCE6AA0A183 80 aa11.38□□□□□ -0.59
PRKN-201ENST00000338468 APOHP02749 345 aaPredicted RBP11.38□□□□□ -0.59
PRKN-201ENST00000338468 HOXB5P09067 269 aa11.38□□□□□ -0.59
PRKN-201ENST00000338468 IGLC1P0CG04 106 aa11.38□□□□□ -0.59
PRKN-201ENST00000338468 LYL1P12980 280 aa11.38□□□□□ -0.59
PRKN-201ENST00000338468 ANXA7P20073 488 aaKnown RBP11.38□□□□□ -0.59
PRKN-201ENST00000338468 RND2P52198 227 aa11.38□□□□□ -0.59
PRKN-201ENST00000338468 CNPY1Q3B7I2 92 aa11.38□□□□□ -0.59
PRKN-201ENST00000338468 TIGITQ495A1 244 aa11.38□□□□□ -0.59
PRKN-201ENST00000338468 GGNBP1Q5YKI7 109 aa11.38□□□□□ -0.59
PRKN-201ENST00000338468 FAM90A2PQ658T7 463 aa11.38□□□□□ -0.59
PRKN-201ENST00000338468 SLC16A13Q7RTY0 426 aa11.38□□□□□ -0.59
PRKN-201ENST00000338468 LILRB2Q8N423 598 aa11.38□□□□□ -0.59
PRKN-201ENST00000338468 CITED4Q96RK1 184 aa11.38□□□□□ -0.59
PRKN-201ENST00000338468 SPAG8Q99932 426 aaPredicted RBP11.38□□□□□ -0.59
PRKN-201ENST00000338468 SRD5A3Q9H8P0 318 aa11.38□□□□□ -0.59
PRKN-201ENST00000338468 TMED3Q9Y3Q3 217 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms