RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 TOMM20LQ6UXN7 152 aa7.87□□□□□ -1.15
CAPN3-202ENST00000337571 ZNF600Q6ZNG1 722 aa7.87□□□□□ -1.15
CAPN3-202ENST00000337571 CCDC71LQ8N9Z2 235 aa7.87□□□□□ -1.15
CAPN3-202ENST00000337571 GATAD1Q8WUU5 269 aa7.87□□□□□ -1.15
CAPN3-202ENST00000337571 RARRES2Q99969 163 aa7.87□□□□□ -1.15
CAPN3-202ENST00000337571 A0A1W2PS18 150 aa7.86□□□□□ -1.15
CAPN3-202ENST00000337571 TMEM50AO95807 157 aa7.86□□□□□ -1.15
CAPN3-202ENST00000337571 CD3DP04234 171 aa7.86□□□□□ -1.15
CAPN3-202ENST00000337571 IFNA4P05014 189 aa7.86□□□□□ -1.15
CAPN3-202ENST00000337571 ZNF182P17025 639 aaPredicted RBP7.86□□□□□ -1.15
CAPN3-202ENST00000337571 TBPP20226 339 aa7.86□□□□□ -1.15
CAPN3-202ENST00000337571 HOXA1P49639 335 aaPredicted RBP7.86□□□□□ -1.15
CAPN3-202ENST00000337571 EWSR1Q01844 656 aaKnown RBP eCLIP7.86□□□□□ -1.15
CAPN3-202ENST00000337571 ZNF124Q15973 351 aa7.86□□□□□ -1.15
CAPN3-202ENST00000337571 IZUMO4Q1ZYL8 232 aa7.86□□□□□ -1.15
CAPN3-202ENST00000337571 SP6Q3SY56 376 aa7.86□□□□□ -1.15
CAPN3-202ENST00000337571 SCGB2B2Q4G0G5 96 aa7.86□□□□□ -1.15
CAPN3-202ENST00000337571 FAM90A2PQ658T7 463 aa7.86□□□□□ -1.15
CAPN3-202ENST00000337571 OR52I2Q8NH67 350 aa7.86□□□□□ -1.15
CAPN3-202ENST00000337571 TERB2Q8NHR7 220 aa7.86□□□□□ -1.15
CAPN3-202ENST00000337571 TMEM230Q96A57 120 aa7.86□□□□□ -1.15
CAPN3-202ENST00000337571 NARS2Q96I59 477 aaKnown RBP7.86□□□□□ -1.15
CAPN3-202ENST00000337571 TP53RKQ96S44 253 aa7.86□□□□□ -1.15
CAPN3-202ENST00000337571 MFFQ9GZY8 342 aa7.86□□□□□ -1.15
CAPN3-202ENST00000337571 EXTL2Q9UBQ6 330 aa7.86□□□□□ -1.15
CAPN3-202ENST00000337571 PUS1Q9Y606 427 aaKnown RBP eCLIP7.86□□□□□ -1.15
CAPN3-202ENST00000337571 A0A0B4J293 547 aa7.85□□□□□ -1.15
CAPN3-202ENST00000337571 IGHV3-66A0A0C4DH42 116 aa7.85□□□□□ -1.15
CAPN3-202ENST00000337571 CCDC160A6NGH7 325 aa7.85□□□□□ -1.15
CAPN3-202ENST00000337571 B3GALNT1O75752 331 aa7.85□□□□□ -1.15
CAPN3-202ENST00000337571 DFFBO76075 338 aa7.85□□□□□ -1.15
CAPN3-202ENST00000337571 IGKV1-5P01602 117 aa7.85□□□□□ -1.15
CAPN3-202ENST00000337571 OPRK1P41145 380 aa7.85□□□□□ -1.15
CAPN3-202ENST00000337571 PPP5CP53041 499 aa7.85□□□□□ -1.15
CAPN3-202ENST00000337571 TAS2R19P59542 299 aa7.85□□□□□ -1.15
CAPN3-202ENST00000337571 LHFPL1Q86WI0 220 aa7.85□□□□□ -1.15
CAPN3-202ENST00000337571 TMEM229BQ8NBD8 167 aa7.85□□□□□ -1.15
CAPN3-202ENST00000337571 OR11H2Q8NH07 326 aa7.85□□□□□ -1.15
CAPN3-202ENST00000337571 C11orf45Q8TAV5 145 aa7.85□□□□□ -1.15
CAPN3-202ENST00000337571 DYNC2LI1Q8TCX1 351 aa7.85□□□□□ -1.15
CAPN3-202ENST00000337571 RAB2BQ8WUD1 216 aa7.85□□□□□ -1.15
CAPN3-202ENST00000337571 PHLDA1Q8WV24 401 aaPredicted RBP7.85□□□□□ -1.15
CAPN3-202ENST00000337571 ST8SIA2Q92186 375 aa7.85□□□□□ -1.15
CAPN3-202ENST00000337571 METTL26Q96S19 204 aa7.85□□□□□ -1.15
CAPN3-202ENST00000337571 BCL7BQ9BQE9 202 aa7.85□□□□□ -1.15
CAPN3-202ENST00000337571 MS4A6AQ9H2W1 248 aa7.85□□□□□ -1.15
CAPN3-202ENST00000337571 PTTG2Q9NZH5 202 aa7.85□□□□□ -1.15
CAPN3-202ENST00000337571 MTFP1Q9UDX5 166 aa7.85□□□□□ -1.15
CAPN3-202ENST00000337571 RABAC1Q9UI14 185 aa7.85□□□□□ -1.15
CAPN3-202ENST00000337571 PLECQ15149 4684 aaKnown RBP7.85□□□□□ -1.15
CAPN3-202ENST00000337571 TRAV30A0A087WSZ9 112 aa7.84□□□□□ -1.15
CAPN3-202ENST00000337571 TEX13DA0A0J9YY54 714 aaPredicted RBP7.84□□□□□ -1.15
CAPN3-202ENST00000337571 INS-IGF2F8WCM5 200 aa7.84□□□□□ -1.15
CAPN3-202ENST00000337571 RGS5O15539 181 aa7.84□□□□□ -1.15
CAPN3-202ENST00000337571 RAB3DO95716 219 aa7.84□□□□□ -1.15
CAPN3-202ENST00000337571 CA1P00915 261 aaPredicted RBP7.84□□□□□ -1.15
CAPN3-202ENST00000337571 APOHP02749 345 aaPredicted RBP7.84□□□□□ -1.15
CAPN3-202ENST00000337571 EIF2B2P49770 351 aaKnown RBP7.84□□□□□ -1.15
CAPN3-202ENST00000337571 DEFB131AP59861 70 aa7.84□□□□□ -1.15
CAPN3-202ENST00000337571 TMEM187Q14656 261 aa7.84□□□□□ -1.15
CAPN3-202ENST00000337571 STEAP1BQ6NZ63 245 aa7.84□□□□□ -1.15
CAPN3-202ENST00000337571 STHQ8IWL8 128 aa7.84□□□□□ -1.15
CAPN3-202ENST00000337571 CENPSQ8N2Z9 138 aa7.84□□□□□ -1.15
CAPN3-202ENST00000337571 GRAMD2BQ96HH9 432 aa7.84□□□□□ -1.15
CAPN3-202ENST00000337571 VSIRQ9H7M9 311 aa7.84□□□□□ -1.15
CAPN3-202ENST00000337571 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.84□□□□□ -1.15
CAPN3-202ENST00000337571 C14orf166Q9Y224 244 aaKnown RBP7.84□□□□□ -1.15
CAPN3-202ENST00000337571 TRAV2A0A0B4J234 112 aa7.83□□□□□ -1.16
CAPN3-202ENST00000337571 RPS10-NUDT3A0A1W2PQS6 291 aa7.83□□□□□ -1.16
CAPN3-202ENST00000337571 GABARAPH6UMI1 98 aa7.83□□□□□ -1.16
CAPN3-202ENST00000337571 CLN5O75503 358 aa7.83□□□□□ -1.16
CAPN3-202ENST00000337571 RNASE2P10153 161 aaKnown RBP7.83□□□□□ -1.16
CAPN3-202ENST00000337571 HTR2BP41595 481 aa7.83□□□□□ -1.16
CAPN3-202ENST00000337571 SPCS3P61009 180 aa7.83□□□□□ -1.16
CAPN3-202ENST00000337571 MEF2DQ14814 521 aa7.83□□□□□ -1.16
CAPN3-202ENST00000337571 RBMS2Q15434 407 aaKnown RBP7.83□□□□□ -1.16
CAPN3-202ENST00000337571 LEMD1Q68G75 181 aa7.83□□□□□ -1.16
CAPN3-202ENST00000337571 FAM219AQ8IW50 185 aa7.83□□□□□ -1.16
CAPN3-202ENST00000337571 STXBP6Q8NFX7 210 aa7.83□□□□□ -1.16
CAPN3-202ENST00000337571 OR13C8Q8NGS7 320 aa7.83□□□□□ -1.16
CAPN3-202ENST00000337571 OR4X1Q8NH49 305 aa7.83□□□□□ -1.16
CAPN3-202ENST00000337571 MARCH1Q8TCQ1 289 aa7.83□□□□□ -1.16
CAPN3-202ENST00000337571 ZNF414Q96IQ9 312 aa7.83□□□□□ -1.16
CAPN3-202ENST00000337571 ABHD1Q96SE0 405 aa7.83□□□□□ -1.16
CAPN3-202ENST00000337571 HEYLQ9NQ87 328 aaPredicted RBP7.83□□□□□ -1.16
CAPN3-202ENST00000337571 FBXL17Q9UF56 701 aa7.83□□□□□ -1.16
CAPN3-202ENST00000337571 A0A1B0GU03 582 aa7.82□□□□□ -1.16
CAPN3-202ENST00000337571 DISC1C4P0D8 188 aa7.82□□□□□ -1.16
CAPN3-202ENST00000337571 P0C879 139 aa7.82□□□□□ -1.16
CAPN3-202ENST00000337571 UCP1P25874 307 aa7.82□□□□□ -1.16
CAPN3-202ENST00000337571 MRPS10P82664 201 aaKnown RBP7.82□□□□□ -1.16
CAPN3-202ENST00000337571 DHODHQ02127 395 aa7.82□□□□□ -1.16
CAPN3-202ENST00000337571 SSBP1Q04837 148 aaKnown RBP7.82□□□□□ -1.16
CAPN3-202ENST00000337571 MLANAQ16655 118 aa7.82□□□□□ -1.16
CAPN3-202ENST00000337571 LILRB2Q8N423 598 aa7.82□□□□□ -1.16
CAPN3-202ENST00000337571 OR4D10Q8NGI6 311 aa7.82□□□□□ -1.16
CAPN3-202ENST00000337571 Q8WTZ3 238 aa7.82□□□□□ -1.16
CAPN3-202ENST00000337571 SLIRPQ9GZT3 109 aaKnown RBP7.82□□□□□ -1.16
CAPN3-202ENST00000337571 TMEM222Q9H0R3 208 aa7.82□□□□□ -1.16
CAPN3-202ENST00000337571 CACFD1Q9UGQ2 172 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms