RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 J3QW42 95 aa13.43□□□□□ -0.26
NPHP3-201ENST00000337331 CFHR1Q03591 330 aa13.43□□□□□ -0.26
NPHP3-201ENST00000337331 FAM71F2Q6NXP2 309 aa13.43□□□□□ -0.26
NPHP3-201ENST00000337331 C17orf98A8MV24 154 aa13.43□□□□□ -0.26
NPHP3-201ENST00000337331 HAPLN4Q86UW8 402 aa13.43□□□□□ -0.26
NPHP3-201ENST00000337331 NPIPB3Q92617 1050 aa13.43□□□□□ -0.26
NPHP3-201ENST00000337331 LYZL4Q96KX0 146 aa13.43□□□□□ -0.26
NPHP3-201ENST00000337331 H3BVH4 76 aa13.42□□□□□ -0.26
NPHP3-201ENST00000337331 RPL15P61313 204 aaKnown RBP13.42□□□□□ -0.26
NPHP3-201ENST00000337331 PSG7Q13046 419 aa13.42□□□□□ -0.26
NPHP3-201ENST00000337331 ZNF114Q8NC26 417 aa13.42□□□□□ -0.26
NPHP3-201ENST00000337331 DCTN5Q9BTE1 182 aa13.42□□□□□ -0.26
NPHP3-201ENST00000337331 HELZP42694 1942 aaKnown RBP13.42□□□□□ -0.26
NPHP3-201ENST00000337331 C5orf63A6NC05 138 aa13.42□□□□□ -0.26
NPHP3-201ENST00000337331 EFNA2O43921 213 aa13.42□□□□□ -0.26
NPHP3-201ENST00000337331 CLDN18P56856 261 aa13.42□□□□□ -0.26
NPHP3-201ENST00000337331 LRRK1Q38SD2 2015 aa13.42□□□□□ -0.26
NPHP3-201ENST00000337331 A0A0G2JRQ6 117 aa13.42□□□□□ -0.26
NPHP3-201ENST00000337331 LIPFP07098 398 aa13.42□□□□□ -0.26
NPHP3-201ENST00000337331 HOXA4Q00056 320 aaPredicted RBP13.42□□□□□ -0.26
NPHP3-201ENST00000337331 CCDC144NLQ6NUI1 221 aa13.42□□□□□ -0.26
NPHP3-201ENST00000337331 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.42□□□□□ -0.26
NPHP3-201ENST00000337331 DPF1Q92782 380 aa13.42□□□□□ -0.26
NPHP3-201ENST00000337331 CECR9P0C854 216 aa13.41□□□□□ -0.26
NPHP3-201ENST00000337331 YPEL3P61236 119 aaPredicted RBP13.41□□□□□ -0.26
NPHP3-201ENST00000337331 SEC11AP67812 179 aa13.41□□□□□ -0.26
NPHP3-201ENST00000337331 OR5A1Q8NGJ0 315 aa13.41□□□□□ -0.26
NPHP3-201ENST00000337331 PGLYRP4Q96LB8 373 aa13.41□□□□□ -0.26
NPHP3-201ENST00000337331 REG1AP05451 166 aa13.41□□□□□ -0.26
NPHP3-201ENST00000337331 HSD52Q0P140 79 aa13.41□□□□□ -0.26
NPHP3-201ENST00000337331 C1orf147Q96MC9 270 aaPredicted RBP13.41□□□□□ -0.26
NPHP3-201ENST00000337331 SLC25A33Q9BSK2 321 aa13.41□□□□□ -0.26
NPHP3-201ENST00000337331 RPL7P18124 248 aaKnown RBP13.41□□□□□ -0.26
NPHP3-201ENST00000337331 FAM201AQ5SY85 155 aa13.41□□□□□ -0.26
NPHP3-201ENST00000337331 RCHY1Q96PM5 261 aa13.41□□□□□ -0.26
NPHP3-201ENST00000337331 UBTD1Q9HAC8 227 aa13.41□□□□□ -0.26
NPHP3-201ENST00000337331 SCGB1D4Q6XE38 83 aa13.41□□□□□ -0.26
NPHP3-201ENST00000337331 ZSWIM8A7E2V4 1837 aa13.4□□□□□ -0.26
NPHP3-201ENST00000337331 OR4C13Q8NGP0 309 aa13.4□□□□□ -0.26
NPHP3-201ENST00000337331 TSSC4Q9Y5U2 329 aaPredicted RBP13.4□□□□□ -0.26
NPHP3-201ENST00000337331 IGKV1D-33P01593 117 aa13.4□□□□□ -0.26
NPHP3-201ENST00000337331 IGKV1-33P01594 117 aa13.4□□□□□ -0.26
NPHP3-201ENST00000337331 CCL1P22362 96 aa13.4□□□□□ -0.26
NPHP3-201ENST00000337331 OR13A1Q8NGR1 328 aa13.4□□□□□ -0.26
NPHP3-201ENST00000337331 OR4A5Q8NH83 315 aa13.4□□□□□ -0.26
NPHP3-201ENST00000337331 KLF7O75840 302 aaPredicted RBP13.4□□□□□ -0.26
NPHP3-201ENST00000337331 SP9P0CG40 484 aa13.4□□□□□ -0.26
NPHP3-201ENST00000337331 ZNF48Q96MX3 618 aaPredicted RBP13.4□□□□□ -0.26
NPHP3-201ENST00000337331 GEMIN7Q9H840 131 aaKnown RBP13.4□□□□□ -0.26
NPHP3-201ENST00000337331 ZFP36L1Q07352 338 aaKnown RBP13.39□□□□□ -0.27
NPHP3-201ENST00000337331 NRN1LQ496H8 165 aa13.39□□□□□ -0.27
NPHP3-201ENST00000337331 TMEM177Q53S58 311 aa13.39□□□□□ -0.27
NPHP3-201ENST00000337331 ACP7Q6ZNF0 438 aa13.39□□□□□ -0.27
NPHP3-201ENST00000337331 Q6ZRM9 215 aa13.39□□□□□ -0.27
NPHP3-201ENST00000337331 HTN1P15515 57 aa13.39□□□□□ -0.27
NPHP3-201ENST00000337331 PAX9P55771 341 aa13.39□□□□□ -0.27
NPHP3-201ENST00000337331 CHODLQ9H9P2 273 aa13.39□□□□□ -0.27
NPHP3-201ENST00000337331 LOC107984156A0A0G2JMH3 177 aa13.39□□□□□ -0.27
NPHP3-201ENST00000337331 TOMM40O96008 361 aa13.39□□□□□ -0.27
NPHP3-201ENST00000337331 GLRXP35754 106 aa13.39□□□□□ -0.27
NPHP3-201ENST00000337331 SPANXN1Q5VSR9 72 aa13.39□□□□□ -0.27
NPHP3-201ENST00000337331 ARL17AQ8IVW1 177 aa13.39□□□□□ -0.27
NPHP3-201ENST00000337331 WDR31Q8NA23 367 aa13.39□□□□□ -0.27
NPHP3-201ENST00000337331 BVES-AS1Q5T3Y7 98 aa13.39□□□□□ -0.27
NPHP3-201ENST00000337331 SFXN3Q9BWM7 321 aa13.39□□□□□ -0.27
NPHP3-201ENST00000337331 LOC102723996A0A087X1L8 192 aa13.38□□□□□ -0.27
NPHP3-201ENST00000337331 ANAPC13Q9BS18 74 aa13.38□□□□□ -0.27
NPHP3-201ENST00000337331 ANAPC10Q9UM13 185 aa13.38□□□□□ -0.27
NPHP3-201ENST00000337331 VWA8A3KMH1 1905 aa13.38□□□□□ -0.27
NPHP3-201ENST00000337331 TCF20Q9UGU0 1960 aaKnown RBP13.38□□□□□ -0.27
NPHP3-201ENST00000337331 CELA3BP08861 270 aa13.38□□□□□ -0.27
NPHP3-201ENST00000337331 SAMD5Q5TGI4 173 aa13.38□□□□□ -0.27
NPHP3-201ENST00000337331 OR9G1Q8NH87 305 aa13.38□□□□□ -0.27
NPHP3-201ENST00000337331 RABAC1Q9UI14 185 aa13.38□□□□□ -0.27
NPHP3-201ENST00000337331 IGLV3-32A0A0A0MS00 114 aa13.38□□□□□ -0.27
NPHP3-201ENST00000337331 FCGR2BP31994 310 aaPredicted RBP13.38□□□□□ -0.27
NPHP3-201ENST00000337331 DGAT2L7PQ6IED9 249 aa13.37□□□□□ -0.27
NPHP3-201ENST00000337331 AP5S1Q9NUS5 200 aa13.37□□□□□ -0.27
NPHP3-201ENST00000337331 SH2D7A6NKC9 451 aaPredicted RBP13.37□□□□□ -0.27
NPHP3-201ENST00000337331 FNDC1Q4ZHG4 1894 aaPredicted RBP13.37□□□□□ -0.27
NPHP3-201ENST00000337331 TRAV8-6A0A0B4J262 113 aa13.37□□□□□ -0.27
NPHP3-201ENST00000337331 IGKV1-12A0A0C4DH73 117 aa13.37□□□□□ -0.27
NPHP3-201ENST00000337331 TMEM189A5PLL7 270 aa13.37□□□□□ -0.27
NPHP3-201ENST00000337331 IZUMO1RA6ND01 250 aa13.37□□□□□ -0.27
NPHP3-201ENST00000337331 IGKV1D-12P01611 117 aa13.37□□□□□ -0.27
NPHP3-201ENST00000337331 KIR3DS1Q14943 382 aa13.37□□□□□ -0.27
NPHP3-201ENST00000337331 ZNF146Q15072 292 aa13.37□□□□□ -0.27
NPHP3-201ENST00000337331 PEAR1Q5VY43 1037 aaPredicted RBP13.37□□□□□ -0.27
NPHP3-201ENST00000337331 PCSK4Q6UW60 755 aa13.37□□□□□ -0.27
NPHP3-201ENST00000337331 MMP23AO75900 390 aa13.36□□□□□ -0.27
NPHP3-201ENST00000337331 FGFBP3Q8TAT2 258 aa13.36□□□□□ -0.27
NPHP3-201ENST00000337331 MGPP08493 103 aa13.36□□□□□ -0.27
NPHP3-201ENST00000337331 TTC32Q5I0X7 151 aa13.36□□□□□ -0.27
NPHP3-201ENST00000337331 WFDC3Q8IUB2 231 aa13.36□□□□□ -0.27
NPHP3-201ENST00000337331 SRSF12Q8WXF0 261 aaKnown RBP13.36□□□□□ -0.27
NPHP3-201ENST00000337331 NHP2Q9NX24 153 aaKnown RBP13.36□□□□□ -0.27
NPHP3-201ENST00000337331 IGHV3-35A0A0C4DH35 117 aa13.36□□□□□ -0.27
NPHP3-201ENST00000337331 A0A1W2PRE2 83 aa13.36□□□□□ -0.27
NPHP3-201ENST00000337331 MOSP00540 346 aa13.36□□□□□ -0.27
NPHP3-201ENST00000337331 FAM27E3Q08E93 113 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms