RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 PDLIM4P50479 330 aa13.4□□□□□ -0.26
TMEM39B-201ENST00000336294 ACTL10Q5JWF8 245 aa13.4□□□□□ -0.26
TMEM39B-201ENST00000336294 PQLC2Q6ZP29 291 aa13.4□□□□□ -0.26
TMEM39B-201ENST00000336294 OR1P1Q8NH06 330 aa13.4□□□□□ -0.26
TMEM39B-201ENST00000336294 OR5R1Q8NH85 324 aa13.4□□□□□ -0.26
TMEM39B-201ENST00000336294 RNF5Q99942 180 aa13.4□□□□□ -0.26
TMEM39B-201ENST00000336294 DERL1Q9BUN8 251 aa13.4□□□□□ -0.26
TMEM39B-201ENST00000336294 MRPL32Q9BYC8 188 aaKnown RBP13.4□□□□□ -0.26
TMEM39B-201ENST00000336294 FNDC4Q9H6D8 234 aaPredicted RBP13.4□□□□□ -0.26
TMEM39B-201ENST00000336294 SPTA1P02549 2419 aa13.4□□□□□ -0.26
TMEM39B-201ENST00000336294 SMG1Q96Q15 3661 aaKnown RBP13.39□□□□□ -0.27
TMEM39B-201ENST00000336294 IGLC7A0M8Q6 106 aa13.39□□□□□ -0.27
TMEM39B-201ENST00000336294 GATCO43716 136 aaKnown RBP13.39□□□□□ -0.27
TMEM39B-201ENST00000336294 AREGP15514 252 aa13.39□□□□□ -0.27
TMEM39B-201ENST00000336294 CNTFRP26992 372 aa13.39□□□□□ -0.27
TMEM39B-201ENST00000336294 GFI1BQ5VTD9 330 aa13.39□□□□□ -0.27
TMEM39B-201ENST00000336294 ETFRF1Q6IPR1 90 aa13.39□□□□□ -0.27
TMEM39B-201ENST00000336294 ZNF114Q8NC26 417 aa13.39□□□□□ -0.27
TMEM39B-201ENST00000336294 HIST1H2BLQ99880 126 aa13.39□□□□□ -0.27
TMEM39B-201ENST00000336294 SSBP3Q9BWW4 388 aaPredicted RBP13.39□□□□□ -0.27
TMEM39B-201ENST00000336294 KALRNO60229 2985 aa13.39□□□□□ -0.27
TMEM39B-201ENST00000336294 LOC105371242A0A075B767 164 aa13.39□□□□□ -0.27
TMEM39B-201ENST00000336294 M0R1W7 72 aa13.39□□□□□ -0.27
TMEM39B-201ENST00000336294 REG1AP05451 166 aa13.39□□□□□ -0.27
TMEM39B-201ENST00000336294 COMPP49747 757 aaPredicted RBP13.39□□□□□ -0.27
TMEM39B-201ENST00000336294 C4orf17Q53FE4 359 aa13.39□□□□□ -0.27
TMEM39B-201ENST00000336294 THAP8Q8NA92 274 aa13.39□□□□□ -0.27
TMEM39B-201ENST00000336294 NECAP1Q8NC96 275 aa13.39□□□□□ -0.27
TMEM39B-201ENST00000336294 OR5T1Q8NG75 326 aa13.39□□□□□ -0.27
TMEM39B-201ENST00000336294 NPIPB3Q92617 1050 aa13.39□□□□□ -0.27
TMEM39B-201ENST00000336294 PACRGQ96M98 296 aaPredicted RBP13.39□□□□□ -0.27
TMEM39B-201ENST00000336294 A0A1W2PPQ1 181 aa13.38□□□□□ -0.27
TMEM39B-201ENST00000336294 TCRBV4S1A1TA0A5B7 111 aa13.38□□□□□ -0.27
TMEM39B-201ENST00000336294 C8orf88P0DMB2 117 aa13.38□□□□□ -0.27
TMEM39B-201ENST00000336294 FABP4P15090 132 aa13.38□□□□□ -0.27
TMEM39B-201ENST00000336294 FOXL1Q12952 345 aa13.38□□□□□ -0.27
TMEM39B-201ENST00000336294 TPTE2P1Q5T6R2 138 aa13.38□□□□□ -0.27
TMEM39B-201ENST00000336294 PVRIGQ6DKI7 326 aa13.38□□□□□ -0.27
TMEM39B-201ENST00000336294 PPP1R27Q86WC6 154 aa13.38□□□□□ -0.27
TMEM39B-201ENST00000336294 OR11H6Q8NGC7 330 aa13.38□□□□□ -0.27
TMEM39B-201ENST00000336294 C11orf52Q96A22 123 aa13.38□□□□□ -0.27
TMEM39B-201ENST00000336294 LY96Q9Y6Y9 160 aa13.38□□□□□ -0.27
TMEM39B-201ENST00000336294 ATRXP46100 2492 aa13.38□□□□□ -0.27
TMEM39B-201ENST00000336294 TRAV9-1A0A075B6T8 112 aa13.37□□□□□ -0.27
TMEM39B-201ENST00000336294 OR7C2O60412 319 aa13.37□□□□□ -0.27
TMEM39B-201ENST00000336294 HTR1DP28221 377 aa13.37□□□□□ -0.27
TMEM39B-201ENST00000336294 ARF6P62330 175 aa13.37□□□□□ -0.27
TMEM39B-201ENST00000336294 SELENOTP62341 195 aa13.37□□□□□ -0.27
TMEM39B-201ENST00000336294 SSX2Q16385 188 aa13.37□□□□□ -0.27
TMEM39B-201ENST00000336294 OR1L4Q8NGR5 311 aa13.37□□□□□ -0.27
TMEM39B-201ENST00000336294 TMEM37Q8WXS4 190 aa13.37□□□□□ -0.27
TMEM39B-201ENST00000336294 ELOVL1Q9BW60 279 aa13.37□□□□□ -0.27
TMEM39B-201ENST00000336294 DNAJC4Q9NNZ3 241 aa13.37□□□□□ -0.27
TMEM39B-201ENST00000336294 MALRD1Q5VYJ5 2156 aa13.37□□□□□ -0.27
TMEM39B-201ENST00000336294 RELNP78509 3460 aa13.37□□□□□ -0.27
TMEM39B-201ENST00000336294 TRAV20A0A0B4J274 112 aa13.36□□□□□ -0.27
TMEM39B-201ENST00000336294 MDFIC2A0A1B0GVS7 189 aa13.36□□□□□ -0.27
TMEM39B-201ENST00000336294 PSMB11A5LHX3 300 aa13.36□□□□□ -0.27
TMEM39B-201ENST00000336294 SSBP2P81877 361 aaPredicted RBP13.36□□□□□ -0.27
TMEM39B-201ENST00000336294 ZNF503Q96F45 646 aa13.36□□□□□ -0.27
TMEM39B-201ENST00000336294 SLC25A33Q9BSK2 321 aa13.36□□□□□ -0.27
TMEM39B-201ENST00000336294 USP24Q9UPU5 2620 aa13.36□□□□□ -0.27
TMEM39B-201ENST00000336294 CORTO00230 105 aa13.36□□□□□ -0.27
TMEM39B-201ENST00000336294 COX7A2P2O60397 106 aa13.36□□□□□ -0.27
TMEM39B-201ENST00000336294 CEACAM3P40198 252 aa13.36□□□□□ -0.27
TMEM39B-201ENST00000336294 BPIFB3P59826 476 aa13.36□□□□□ -0.27
TMEM39B-201ENST00000336294 FAM209BQ5JX69 171 aa13.36□□□□□ -0.27
TMEM39B-201ENST00000336294 HCP5Q6MZN7 132 aa13.36□□□□□ -0.27
TMEM39B-201ENST00000336294 C22orf15Q8WYQ4 148 aa13.36□□□□□ -0.27
TMEM39B-201ENST00000336294 MISP3Q96FF7 219 aa13.36□□□□□ -0.27
TMEM39B-201ENST00000336294 PRDM13Q9H4Q3 707 aa13.36□□□□□ -0.27
TMEM39B-201ENST00000336294 DPM3Q9P2X0 92 aa13.36□□□□□ -0.27
TMEM39B-201ENST00000336294 IGKV1D-37A0A075B6S9 117 aa13.35□□□□□ -0.27
TMEM39B-201ENST00000336294 XKRY2A2RUG3 117 aa13.35□□□□□ -0.27
TMEM39B-201ENST00000336294 TIMM23O14925 209 aa13.35□□□□□ -0.27
TMEM39B-201ENST00000336294 CRYGCP07315 174 aa13.35□□□□□ -0.27
TMEM39B-201ENST00000336294 GPR6P46095 362 aaPredicted RBP13.35□□□□□ -0.27
TMEM39B-201ENST00000336294 PDZD11Q5EBL8 140 aa13.35□□□□□ -0.27
TMEM39B-201ENST00000336294 ITLN2Q8WWU7 325 aaPredicted RBP13.35□□□□□ -0.27
TMEM39B-201ENST00000336294 FBXL15Q9H469 300 aa13.35□□□□□ -0.27
TMEM39B-201ENST00000336294 TRBV20OR9-2A0A075B6H5 130 aa13.34□□□□□ -0.27
TMEM39B-201ENST00000336294 C9JCJ5 164 aa13.34□□□□□ -0.27
TMEM39B-201ENST00000336294 PRTN3P24158 256 aa13.34□□□□□ -0.27
TMEM39B-201ENST00000336294 JOSD1Q15040 202 aaPredicted RBP13.34□□□□□ -0.27
TMEM39B-201ENST00000336294 PLGLAQ15195 96 aa13.34□□□□□ -0.27
TMEM39B-201ENST00000336294 C10orf113Q5VZT2 155 aa13.34□□□□□ -0.27
TMEM39B-201ENST00000336294 SFRP2Q96HF1 295 aa13.34□□□□□ -0.27
TMEM39B-201ENST00000336294 A0A1W2PPR1 153 aa13.34□□□□□ -0.27
TMEM39B-201ENST00000336294 PGPEP1LA6NFU8 196 aa13.34□□□□□ -0.27
TMEM39B-201ENST00000336294 TEX22C9J3V5 150 aa13.34□□□□□ -0.27
TMEM39B-201ENST00000336294 IGHV3-48P01763 117 aa13.34□□□□□ -0.27
TMEM39B-201ENST00000336294 AMBPP02760 352 aa13.34□□□□□ -0.27
TMEM39B-201ENST00000336294 MFAP2P55001 183 aa13.34□□□□□ -0.27
TMEM39B-201ENST00000336294 PKIAP61925 76 aa13.34□□□□□ -0.27
TMEM39B-201ENST00000336294 PAX2Q02962 417 aa13.34□□□□□ -0.27
TMEM39B-201ENST00000336294 ZNF90Q03938 601 aa13.34□□□□□ -0.27
TMEM39B-201ENST00000336294 LDLRAD2Q5SZI1 272 aa13.34□□□□□ -0.27
TMEM39B-201ENST00000336294 SLC25A2Q9BXI2 301 aa13.34□□□□□ -0.27
TMEM39B-201ENST00000336294 UBTD1Q9HAC8 227 aa13.34□□□□□ -0.27
TMEM39B-201ENST00000336294 AURKAIP1Q9NWT8 199 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms