RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 DUX4L9Q6RFH8 374 aaPredicted RBP5.37□□□□□ -1.55
HMG20A-201ENST00000336216 ZNF497Q6ZNH5 498 aa5.37□□□□□ -1.55
HMG20A-201ENST00000336216 GCSAMQ8N6F7 178 aa5.37□□□□□ -1.55
HMG20A-201ENST00000336216 OR10W1Q8NGF6 305 aa5.37□□□□□ -1.55
HMG20A-201ENST00000336216 NEU1Q99519 415 aa5.37□□□□□ -1.55
HMG20A-201ENST00000336216 RASL11BQ9BPW5 248 aa5.37□□□□□ -1.55
HMG20A-201ENST00000336216 RNASE7Q9H1E1 156 aaKnown RBP5.37□□□□□ -1.55
HMG20A-201ENST00000336216 TMEM131Q92545 1883 aa5.37□□□□□ -1.55
HMG20A-201ENST00000336216 TRAV1-1A0A0B4J248 108 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 C17orf100A8MU93 164 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 F2Z2F3 143 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 LCN2P80188 198 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 ACTL10Q5JWF8 245 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 C10orf113Q5VZT2 155 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 ZNF324BQ6AW86 544 aaPredicted RBP5.36□□□□□ -1.55
HMG20A-201ENST00000336216 OR4A47Q6IF82 309 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 PDPNQ86YL7 162 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 CD177Q8N6Q3 437 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 NUP210LQ5VU65 1888 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 SAA2-SAA4A0A096LPE2 208 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 SNAI2O43623 268 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 IGKV1-39P01597 117 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 IGHV1-46P01743 117 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 IGKV1D-39P04432 117 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 SAA2P0DJI9 122 aaPredicted RBP5.36□□□□□ -1.55
HMG20A-201ENST00000336216 IGFBP2P18065 325 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 LY6EQ16553 131 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 MLANAQ16655 118 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 TMEM42Q69YG0 159 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 ASCL5Q7RTU5 278 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 WFDC3Q8IUB2 231 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 MRPL20Q9BYC9 149 aaKnown RBP5.36□□□□□ -1.55
HMG20A-201ENST00000336216 CHODLQ9H9P2 273 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 NRN1Q9NPD7 142 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 IL19Q9UHD0 177 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 JPT1Q9UK76 154 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 MUC21A0A0G2JKD1 596 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 MUC21A0A140T8X8 626 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 KBTBD11-OT1A0A1B0GTJ5 212 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 LINC00473A8K010 186 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 CGAP01215 116 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 SFTPCP11686 197 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 CEACAM3P40198 252 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 MORN2Q502X0 79 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 MUC21Q5SSG8 566 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 LEMD1Q68G75 181 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 CRIP3Q6Q6R5 217 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 Q6ZPA2 131 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 SSC4DQ8WTU2 575 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 LSM10Q969L4 123 aaKnown RBP5.36□□□□□ -1.55
HMG20A-201ENST00000336216 YPEL4Q96NS1 127 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 GP6Q9HCN6 339 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 UQCR10Q9UDW1 63 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 NACAE9PAV3 2078 aa5.36□□□□□ -1.55
HMG20A-201ENST00000336216 PGPA6NDG6 321 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 F2RL2O00254 374 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 OR9G9P0C7N8 305 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 MAS1LP35410 378 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 FOXA3P55318 350 aaPredicted RBP5.35□□□□□ -1.55
HMG20A-201ENST00000336216 RELBQ01201 579 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 STPG3Q8N7X2 389 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 PARD6GQ9BYG4 376 aaPredicted RBP5.35□□□□□ -1.55
HMG20A-201ENST00000336216 IGHV3-66A0A0C4DH42 116 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 DPRXA6NFQ7 191 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 ETV2O00321 342 aaPredicted RBP5.35□□□□□ -1.55
HMG20A-201ENST00000336216 RBFOX2O43251 390 aaKnown RBP eCLIP5.35□□□□□ -1.55
HMG20A-201ENST00000336216 CXorf1O96002 111 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 COL8A1P27658 744 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 KIR2DS2P43631 304 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 SPATA31B1PQ5VZV4 182 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 Q6ZWC4 215 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 ZNF738Q8NE65 137 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 OR4F17Q8NGA8 305 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 OR4B1Q8NGF8 309 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 COQ2Q96H96 371 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 PLSCR4Q9NRQ2 329 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 LINC00527Q9UJ94 153 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 LAMTOR2Q9Y2Q5 125 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 ACANP16112 2415 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 A0A0G2JNJ9 132 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 ZNF207O43670 478 aaKnown RBP5.35□□□□□ -1.55
HMG20A-201ENST00000336216 OR2J3O76001 311 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 TIMP3P35625 211 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 ZNF585BQ52M93 769 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 CENPWQ5EE01 88 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 PCSK4Q6UW60 755 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 ODF3L1Q8IXM7 274 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 WDR31Q8NA23 367 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 OR4C13Q8NGP0 309 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 RNASEH2CQ8TDP1 164 aaKnown RBP5.35□□□□□ -1.55
HMG20A-201ENST00000336216 SPSB4Q96A44 273 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 NABP2Q9BQ15 211 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 AAMDCQ9H7C9 122 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 Q9UFV3 132 aa5.35□□□□□ -1.55
HMG20A-201ENST00000336216 TNFSF13O75888 250 aa5.34□□□□□ -1.55
HMG20A-201ENST00000336216 VENTXO95231 258 aa5.34□□□□□ -1.55
HMG20A-201ENST00000336216 APCSP02743 223 aa5.34□□□□□ -1.55
HMG20A-201ENST00000336216 FRMD6-AS1P0C7T7 363 aa5.34□□□□□ -1.55
HMG20A-201ENST00000336216 HTR1DP28221 377 aa5.34□□□□□ -1.55
HMG20A-201ENST00000336216 FCGR2BP31994 310 aaPredicted RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms