RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 SLC25A2Q9BXI2 301 aa14.29□□□□□ -0.12
LRCH3-201ENST00000334859 TMEM133Q9H2Q1 129 aa14.29□□□□□ -0.12
LRCH3-201ENST00000334859 A0A1W2PPI3 338 aa14.29□□□□□ -0.12
LRCH3-201ENST00000334859 ZNF705GA8MUZ8 300 aaPredicted RBP14.29□□□□□ -0.12
LRCH3-201ENST00000334859 APOBEC3AP31941 199 aaPredicted RBP14.29□□□□□ -0.12
LRCH3-201ENST00000334859 MC5RP33032 325 aa14.29□□□□□ -0.12
LRCH3-201ENST00000334859 MMD2Q8IY49 270 aa14.29□□□□□ -0.12
LRCH3-201ENST00000334859 SCNM1Q9BWG6 230 aa14.29□□□□□ -0.12
LRCH3-201ENST00000334859 TRAV9-1A0A075B6T8 112 aa14.28□□□□□ -0.12
LRCH3-201ENST00000334859 A0A087X0M5 115 aa14.28□□□□□ -0.12
LRCH3-201ENST00000334859 A0A1B0GX30 115 aa14.28□□□□□ -0.12
LRCH3-201ENST00000334859 A0A1W2PRE2 83 aa14.28□□□□□ -0.12
LRCH3-201ENST00000334859 PSMB11A5LHX3 300 aa14.28□□□□□ -0.12
LRCH3-201ENST00000334859 C10orf113Q5VZT2 155 aa14.28□□□□□ -0.12
LRCH3-201ENST00000334859 RNF2Q99496 336 aa14.28□□□□□ -0.12
LRCH3-201ENST00000334859 SSUH2Q9Y2M2 353 aa14.28□□□□□ -0.12
LRCH3-201ENST00000334859 V9GYV3 84 aa14.28□□□□□ -0.12
LRCH3-201ENST00000334859 ANKHD1Q8IWZ3 2542 aaKnown RBP14.28□□□□□ -0.12
LRCH3-201ENST00000334859 GRIFINA4D1Z8 144 aa14.27□□□□□ -0.12
LRCH3-201ENST00000334859 LYNX1G3V0Z9 82 aa14.27□□□□□ -0.12
LRCH3-201ENST00000334859 K7ENP7 123 aa14.27□□□□□ -0.12
LRCH3-201ENST00000334859 PLAUP00749 431 aa14.27□□□□□ -0.12
LRCH3-201ENST00000334859 LYNX1P0DP58 116 aa14.27□□□□□ -0.12
LRCH3-201ENST00000334859 YPEL3P61236 119 aaPredicted RBP14.27□□□□□ -0.12
LRCH3-201ENST00000334859 TMEM256Q8N2U0 113 aa14.27□□□□□ -0.12
LRCH3-201ENST00000334859 OR1L6Q8NGR2 347 aa14.27□□□□□ -0.12
LRCH3-201ENST00000334859 FAM167A-AS1Q96KT0 104 aa14.27□□□□□ -0.12
LRCH3-201ENST00000334859 RNASE7Q9H1E1 156 aaKnown RBP14.27□□□□□ -0.12
LRCH3-201ENST00000334859 ZNF355PQ9NSJ1 428 aa14.27□□□□□ -0.12
LRCH3-201ENST00000334859 B9A039 149 aa14.27□□□□□ -0.13
LRCH3-201ENST00000334859 PYYP10082 97 aa14.27□□□□□ -0.13
LRCH3-201ENST00000334859 MGST1P10620 155 aaKnown RBP14.27□□□□□ -0.13
LRCH3-201ENST00000334859 PPOXP50336 477 aa14.27□□□□□ -0.13
LRCH3-201ENST00000334859 LGALS4P56470 323 aa14.27□□□□□ -0.13
LRCH3-201ENST00000334859 BPIFB3P59826 476 aa14.27□□□□□ -0.13
LRCH3-201ENST00000334859 FXYD3Q14802 87 aa14.27□□□□□ -0.13
LRCH3-201ENST00000334859 OR8I2Q8N0Y5 310 aa14.27□□□□□ -0.13
LRCH3-201ENST00000334859 VKORC1Q9BQB6 163 aa14.27□□□□□ -0.13
LRCH3-201ENST00000334859 TACC2O95359 2948 aa14.26□□□□□ -0.13
LRCH3-201ENST00000334859 TCRBV4S1A1TA0A5B7 111 aa14.26□□□□□ -0.13
LRCH3-201ENST00000334859 GCGP01275 180 aa14.26□□□□□ -0.13
LRCH3-201ENST00000334859 APELAP0DMC3 54 aa14.26□□□□□ -0.13
LRCH3-201ENST00000334859 HCP5Q6MZN7 132 aa14.26□□□□□ -0.13
LRCH3-201ENST00000334859 C11orf42Q8N5U0 333 aa14.26□□□□□ -0.13
LRCH3-201ENST00000334859 OR1L4Q8NGR5 311 aa14.26□□□□□ -0.13
LRCH3-201ENST00000334859 MRPL18Q9H0U6 180 aaKnown RBP14.26□□□□□ -0.13
LRCH3-201ENST00000334859 MRPL36Q9P0J6 103 aaKnown RBP14.26□□□□□ -0.13
LRCH3-201ENST00000334859 FAM90A27PA6NNH2 459 aa14.26□□□□□ -0.13
LRCH3-201ENST00000334859 DDTP30046 118 aa14.26□□□□□ -0.13
LRCH3-201ENST00000334859 IER3P46695 156 aa14.26□□□□□ -0.13
LRCH3-201ENST00000334859 LGALS7P47929 136 aa14.26□□□□□ -0.13
LRCH3-201ENST00000334859 LINC01560Q8TB33 94 aa14.26□□□□□ -0.13
LRCH3-201ENST00000334859 MISP3Q96FF7 219 aa14.26□□□□□ -0.13
LRCH3-201ENST00000334859 LRBAP50851 2863 aa14.25□□□□□ -0.13
LRCH3-201ENST00000334859 IGHV2-26A0A0B4J1V2 119 aa14.25□□□□□ -0.13
LRCH3-201ENST00000334859 FCN1O00602 326 aa14.25□□□□□ -0.13
LRCH3-201ENST00000334859 GATCO43716 136 aaKnown RBP14.25□□□□□ -0.13
LRCH3-201ENST00000334859 TNXAQ16473 311 aa14.25□□□□□ -0.13
LRCH3-201ENST00000334859 PAXXQ9BUH6 204 aa14.25□□□□□ -0.13
LRCH3-201ENST00000334859 RALYQ9UKM9 306 aaKnown RBP14.25□□□□□ -0.13
LRCH3-201ENST00000334859 MALRD1Q5VYJ5 2156 aa14.25□□□□□ -0.13
LRCH3-201ENST00000334859 IGKV1D-37A0A075B6S9 117 aa14.25□□□□□ -0.13
LRCH3-201ENST00000334859 MOSP00540 346 aa14.25□□□□□ -0.13
LRCH3-201ENST00000334859 TCL1AP56279 114 aa14.25□□□□□ -0.13
LRCH3-201ENST00000334859 NHLRC2Q8NBF2 726 aa14.25□□□□□ -0.13
LRCH3-201ENST00000334859 SNURFLB1AK76 121 aa14.24□□□□□ -0.13
LRCH3-201ENST00000334859 SPINK4O60575 86 aa14.24□□□□□ -0.13
LRCH3-201ENST00000334859 FRMD6-AS1P0C7T7 363 aa14.24□□□□□ -0.13
LRCH3-201ENST00000334859 CNTFRP26992 372 aa14.24□□□□□ -0.13
LRCH3-201ENST00000334859 SELENOTP62341 195 aa14.24□□□□□ -0.13
LRCH3-201ENST00000334859 C19orf35Q6ZS72 473 aa14.24□□□□□ -0.13
LRCH3-201ENST00000334859 IGLC7A0M8Q6 106 aa14.24□□□□□ -0.13
LRCH3-201ENST00000334859 NUPR1O60356 82 aa14.24□□□□□ -0.13
LRCH3-201ENST00000334859 SNRPCP09234 159 aaKnown RBP14.24□□□□□ -0.13
LRCH3-201ENST00000334859 MRGPRG-AS1Q2M3A8 158 aa14.24□□□□□ -0.13
LRCH3-201ENST00000334859 PATE2Q6UY27 113 aa14.24□□□□□ -0.13
LRCH3-201ENST00000334859 THAP8Q8NA92 274 aa14.24□□□□□ -0.13
LRCH3-201ENST00000334859 IGF2BP2-AS1Q96M15 143 aa14.24□□□□□ -0.13
LRCH3-201ENST00000334859 IGF2RP11717 2491 aa14.23□□□□□ -0.13
LRCH3-201ENST00000334859 COX7A1P24310 79 aa14.23□□□□□ -0.13
LRCH3-201ENST00000334859 RPL27AP46776 148 aaKnown RBP14.23□□□□□ -0.13
LRCH3-201ENST00000334859 SLC35B1P78383 322 aa14.23□□□□□ -0.13
LRCH3-201ENST00000334859 IBA57Q5T440 356 aaKnown RBP14.23□□□□□ -0.13
LRCH3-201ENST00000334859 UNQ6494/PRO21346Q6UXR6 183 aa14.23□□□□□ -0.13
LRCH3-201ENST00000334859 MUC15Q8N387 334 aa14.23□□□□□ -0.13
LRCH3-201ENST00000334859 CMTM2Q8TAZ6 248 aa14.23□□□□□ -0.13
LRCH3-201ENST00000334859 LINC00479Q96M42 142 aa14.23□□□□□ -0.13
LRCH3-201ENST00000334859 OSTCQ9NRP0 149 aa14.23□□□□□ -0.13
LRCH3-201ENST00000334859 SERTAD4Q9NUC0 356 aa14.23□□□□□ -0.13
LRCH3-201ENST00000334859 CRISP2P16562 243 aa14.22□□□□□ -0.13
LRCH3-201ENST00000334859 ORM2P19652 201 aa14.22□□□□□ -0.13
LRCH3-201ENST00000334859 PRRX1P54821 245 aa14.22□□□□□ -0.13
LRCH3-201ENST00000334859 CASP6P55212 293 aa14.22□□□□□ -0.13
LRCH3-201ENST00000334859 LINC00305Q7Z4B0 112 aa14.22□□□□□ -0.13
LRCH3-201ENST00000334859 TNFRSF14Q92956 283 aa14.22□□□□□ -0.13
LRCH3-201ENST00000334859 C14orf144Q96I85 54 aa14.22□□□□□ -0.13
LRCH3-201ENST00000334859 TNFRSF19Q9NS68 423 aa14.22□□□□□ -0.13
LRCH3-201ENST00000334859 AMMECR1Q9Y4X0 333 aaPredicted RBP14.22□□□□□ -0.13
LRCH3-201ENST00000334859 INSIG2Q9Y5U4 225 aa14.22□□□□□ -0.13
LRCH3-201ENST00000334859 IGHV3-21A0A0B4J1V1 117 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms