RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 FAM240BA0A1B0GVZ2 78 aa10.63□□□□□ -0.71
LIMS1-201ENST00000332345 RPS10-NUDT3A0A1W2PQS6 291 aa10.63□□□□□ -0.71
LIMS1-201ENST00000332345 A8MWP6 167 aa10.63□□□□□ -0.71
LIMS1-201ENST00000332345 FAM90A26D6RGX4 464 aa10.63□□□□□ -0.71
LIMS1-201ENST00000332345 PITX3O75364 302 aa10.63□□□□□ -0.71
LIMS1-201ENST00000332345 SCGB2A1O75556 95 aa10.63□□□□□ -0.71
LIMS1-201ENST00000332345 MED6O75586 246 aa10.63□□□□□ -0.71
LIMS1-201ENST00000332345 IFNA10P01566 189 aa10.63□□□□□ -0.71
LIMS1-201ENST00000332345 OPRK1P41145 380 aa10.63□□□□□ -0.71
LIMS1-201ENST00000332345 DEFB114Q30KQ6 69 aa10.63□□□□□ -0.71
LIMS1-201ENST00000332345 TM4SF20Q53R12 229 aa10.63□□□□□ -0.71
LIMS1-201ENST00000332345 GGNBP1Q5YKI7 109 aa10.63□□□□□ -0.71
LIMS1-201ENST00000332345 UNQ9165/PRO28630Q6UXU0 137 aa10.63□□□□□ -0.71
LIMS1-201ENST00000332345 ADAMTSL5Q6ZMM2 481 aa10.63□□□□□ -0.71
LIMS1-201ENST00000332345 SLC24A4Q8NFF2 622 aa10.63□□□□□ -0.71
LIMS1-201ENST00000332345 RNASEH2CQ8TDP1 164 aaKnown RBP10.63□□□□□ -0.71
LIMS1-201ENST00000332345 C20orf85Q9H1P6 137 aa10.63□□□□□ -0.71
LIMS1-201ENST00000332345 MRPL27Q9P0M9 148 aaKnown RBP10.63□□□□□ -0.71
LIMS1-201ENST00000332345 LSM4Q9Y4Z0 139 aaKnown RBP10.63□□□□□ -0.71
LIMS1-201ENST00000332345 TGP01266 2768 aa10.62□□□□□ -0.71
LIMS1-201ENST00000332345 TMEM213A2RRL7 107 aa10.62□□□□□ -0.71
LIMS1-201ENST00000332345 UPK1BO75841 260 aa10.62□□□□□ -0.71
LIMS1-201ENST00000332345 NPY1RP25929 384 aa10.62□□□□□ -0.71
LIMS1-201ENST00000332345 ADMP35318 185 aa10.62□□□□□ -0.71
LIMS1-201ENST00000332345 CD300EQ496F6 205 aaPredicted RBP10.62□□□□□ -0.71
LIMS1-201ENST00000332345 ETFRF1Q6IPR1 90 aa10.62□□□□□ -0.71
LIMS1-201ENST00000332345 UXS1Q8NBZ7 420 aa10.62□□□□□ -0.71
LIMS1-201ENST00000332345 TMEM190Q8WZ59 177 aa10.62□□□□□ -0.71
LIMS1-201ENST00000332345 DAZ1Q9NQZ3 744 aaKnown RBP10.62□□□□□ -0.71
LIMS1-201ENST00000332345 SMAD5-AS1Q9Y6J3 95 aa10.62□□□□□ -0.71
LIMS1-201ENST00000332345 TRAV30A0A087WSZ9 112 aa10.61□□□□□ -0.71
LIMS1-201ENST00000332345 K7EMT4 169 aa10.61□□□□□ -0.71
LIMS1-201ENST00000332345 YIF1AO95070 293 aa10.61□□□□□ -0.71
LIMS1-201ENST00000332345 TMEM50AO95807 157 aa10.61□□□□□ -0.71
LIMS1-201ENST00000332345 H2AFB2P0C5Z0 115 aa10.61□□□□□ -0.71
LIMS1-201ENST00000332345 C8orf88P0DMB2 117 aa10.61□□□□□ -0.71
LIMS1-201ENST00000332345 SLC25A4P12235 298 aa10.61□□□□□ -0.71
LIMS1-201ENST00000332345 ASAH1Q13510 395 aa10.61□□□□□ -0.71
LIMS1-201ENST00000332345 MLANAQ16655 118 aa10.61□□□□□ -0.71
LIMS1-201ENST00000332345 OR4X1Q8NH49 305 aa10.61□□□□□ -0.71
LIMS1-201ENST00000332345 CIB3Q96Q77 187 aaPredicted RBP10.61□□□□□ -0.71
LIMS1-201ENST00000332345 C20orf24Q9BUV8 137 aa10.61□□□□□ -0.71
LIMS1-201ENST00000332345 NUDT15Q9NV35 164 aa10.61□□□□□ -0.71
LIMS1-201ENST00000332345 TRAV6A0A075B6T7 132 aa10.6□□□□□ -0.71
LIMS1-201ENST00000332345 C15orf62A8K5M9 175 aa10.6□□□□□ -0.71
LIMS1-201ENST00000332345 CLN5O75503 358 aa10.6□□□□□ -0.71
LIMS1-201ENST00000332345 ADAP1O75689 374 aa10.6□□□□□ -0.71
LIMS1-201ENST00000332345 RPP30P78346 268 aaKnown RBP10.6□□□□□ -0.71
LIMS1-201ENST00000332345 CD69Q07108 199 aa10.6□□□□□ -0.71
LIMS1-201ENST00000332345 GTSCR1Q86UQ5 136 aa10.6□□□□□ -0.71
LIMS1-201ENST00000332345 MITD1Q8WV92 249 aa10.6□□□□□ -0.71
LIMS1-201ENST00000332345 CACNG8Q8WXS5 425 aa10.6□□□□□ -0.71
LIMS1-201ENST00000332345 B9D2Q9BPU9 175 aa10.6□□□□□ -0.71
LIMS1-201ENST00000332345 FNDC4Q9H6D8 234 aaPredicted RBP10.6□□□□□ -0.71
LIMS1-201ENST00000332345 TBC1D24Q9ULP9 559 aa10.6□□□□□ -0.71
LIMS1-201ENST00000332345 IZUMO1RA6ND01 250 aa10.59□□□□□ -0.71
LIMS1-201ENST00000332345 SYNGR2O43760 224 aa10.59□□□□□ -0.71
LIMS1-201ENST00000332345 IFNA4P05014 189 aa10.59□□□□□ -0.71
LIMS1-201ENST00000332345 EDN2P20800 178 aa10.59□□□□□ -0.71
LIMS1-201ENST00000332345 RAB11AP62491 216 aa10.59□□□□□ -0.71
LIMS1-201ENST00000332345 ZNF600Q6ZNG1 722 aa10.59□□□□□ -0.71
LIMS1-201ENST00000332345 MLXQ9UH92 298 aa10.59□□□□□ -0.71
LIMS1-201ENST00000332345 TRAV14DV4A0A0A6YYC5 116 aa10.58□□□□□ -0.72
LIMS1-201ENST00000332345 TRAV25A0A0B4J276 109 aa10.58□□□□□ -0.72
LIMS1-201ENST00000332345 ZNF785A8K8V0 405 aa10.58□□□□□ -0.72
LIMS1-201ENST00000332345 GPX4P36969 197 aaPredicted RBP10.58□□□□□ -0.72
LIMS1-201ENST00000332345 ID3Q02535 119 aa10.58□□□□□ -0.72
LIMS1-201ENST00000332345 GUCA2BQ16661 112 aa10.58□□□□□ -0.72
LIMS1-201ENST00000332345 LAMTOR1Q6IAA8 161 aa10.58□□□□□ -0.72
LIMS1-201ENST00000332345 PRSS54Q6PEW0 395 aa10.58□□□□□ -0.72
LIMS1-201ENST00000332345 RBPMS2Q6ZRY4 209 aaKnown RBP10.58□□□□□ -0.72
LIMS1-201ENST00000332345 TMEM116Q8NCL8 245 aa10.58□□□□□ -0.72
LIMS1-201ENST00000332345 OR52B4Q8NGK2 314 aa10.58□□□□□ -0.72
LIMS1-201ENST00000332345 ENKURQ8TC29 256 aa10.58□□□□□ -0.72
LIMS1-201ENST00000332345 ZNF431Q8TF32 576 aaPredicted RBP10.58□□□□□ -0.72
LIMS1-201ENST00000332345 TMEM170AQ8WVE7 144 aa10.58□□□□□ -0.72
LIMS1-201ENST00000332345 OR10C1Q96KK4 312 aa10.58□□□□□ -0.72
LIMS1-201ENST00000332345 GINS3Q9BRX5 216 aa10.58□□□□□ -0.72
LIMS1-201ENST00000332345 MAGT1Q9H0U3 335 aa10.58□□□□□ -0.72
LIMS1-201ENST00000332345 PLA2G2EQ9NZK7 142 aa10.58□□□□□ -0.72
LIMS1-201ENST00000332345 IGHV3OR16-8A0A075B7F1 116 aa10.57□□□□□ -0.72
LIMS1-201ENST00000332345 MPTX1A8MV57 137 aa10.57□□□□□ -0.72
LIMS1-201ENST00000332345 WRBO00258 174 aa10.57□□□□□ -0.72
LIMS1-201ENST00000332345 ZNF207O43670 478 aaKnown RBP10.57□□□□□ -0.72
LIMS1-201ENST00000332345 IAPPP10997 89 aa10.57□□□□□ -0.72
LIMS1-201ENST00000332345 NKX2-1P43699 371 aaPredicted RBP10.57□□□□□ -0.72
LIMS1-201ENST00000332345 DEFA1P59665 94 aa10.57□□□□□ -0.72
LIMS1-201ENST00000332345 DEFA3P59666 94 aa10.57□□□□□ -0.72
LIMS1-201ENST00000332345 C11orf87Q6NUJ2 197 aa10.57□□□□□ -0.72
LIMS1-201ENST00000332345 BTNL8Q6UX41 500 aa10.57□□□□□ -0.72
LIMS1-201ENST00000332345 TOMM20LQ6UXN7 152 aa10.57□□□□□ -0.72
LIMS1-201ENST00000332345 Q8N1Y9 231 aa10.57□□□□□ -0.72
LIMS1-201ENST00000332345 OR1S2Q8NGQ3 325 aa10.57□□□□□ -0.72
LIMS1-201ENST00000332345 MRPL36Q9P0J6 103 aaKnown RBP10.57□□□□□ -0.72
LIMS1-201ENST00000332345 SMPXQ9UHP9 88 aa10.57□□□□□ -0.72
LIMS1-201ENST00000332345 PUS1Q9Y606 427 aaKnown RBP eCLIP10.57□□□□□ -0.72
LIMS1-201ENST00000332345 IGHV7-4-1A0A0J9YVY3 117 aa10.56□□□□□ -0.72
LIMS1-201ENST00000332345 NHLRC4P0CG21 123 aaPredicted RBP10.56□□□□□ -0.72
LIMS1-201ENST00000332345 BMI1P35226 326 aa10.56□□□□□ -0.72
LIMS1-201ENST00000332345 RND2P52198 227 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms