RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 NDUFS6O75380 124 aaKnown RBP8.48□□□□□ -1.05
CHD3-201ENST00000330494 MRPL32Q9BYC8 188 aaKnown RBP8.48□□□□□ -1.05
CHD3-201ENST00000330494 IGKV1-12A0A0C4DH73 117 aa8.48□□□□□ -1.05
CHD3-201ENST00000330494 IGKV1D-12P01611 117 aa8.48□□□□□ -1.05
CHD3-201ENST00000330494 FBLN7Q53RD9 439 aa8.48□□□□□ -1.05
CHD3-201ENST00000330494 NUDT11Q96G61 164 aa8.48□□□□□ -1.05
CHD3-201ENST00000330494 PMCHL2Q9BQD1 86 aa8.48□□□□□ -1.05
CHD3-201ENST00000330494 FNDC4Q9H6D8 234 aaPredicted RBP8.48□□□□□ -1.05
CHD3-201ENST00000330494 METRNQ9UJH8 293 aa8.48□□□□□ -1.05
CHD3-201ENST00000330494 NPIPB6E9PJ23 425 aa8.48□□□□□ -1.05
CHD3-201ENST00000330494 J3QRE1 110 aa8.48□□□□□ -1.05
CHD3-201ENST00000330494 MLNRO43193 412 aa8.48□□□□□ -1.05
CHD3-201ENST00000330494 CD8AP01732 235 aa8.48□□□□□ -1.05
CHD3-201ENST00000330494 NRN1LQ496H8 165 aa8.48□□□□□ -1.05
CHD3-201ENST00000330494 GCSAMLQ5JQS6 135 aa8.48□□□□□ -1.05
CHD3-201ENST00000330494 DUX3Q96PT4 197 aa8.48□□□□□ -1.05
CHD3-201ENST00000330494 IGLV3-32A0A0A0MS00 114 aa8.48□□□□□ -1.05
CHD3-201ENST00000330494 UCP1P25874 307 aa8.48□□□□□ -1.05
CHD3-201ENST00000330494 PRR30Q53SZ7 412 aaPredicted RBP8.48□□□□□ -1.05
CHD3-201ENST00000330494 GALNT14Q96FL9 552 aa8.48□□□□□ -1.05
CHD3-201ENST00000330494 F8VVB4 439 aa8.47□□□□□ -1.05
CHD3-201ENST00000330494 F8VWA3 439 aa8.47□□□□□ -1.05
CHD3-201ENST00000330494 OR9G9P0C7N8 305 aa8.47□□□□□ -1.05
CHD3-201ENST00000330494 JKAMPQ9P055 326 aa8.47□□□□□ -1.05
CHD3-201ENST00000330494 IGKV1-27A0A075B6S5 117 aa8.47□□□□□ -1.05
CHD3-201ENST00000330494 TMEM95Q3KNT9 176 aa8.47□□□□□ -1.05
CHD3-201ENST00000330494 NEUROG1Q92886 237 aa8.47□□□□□ -1.05
CHD3-201ENST00000330494 ZNF581Q9P0T4 197 aa8.47□□□□□ -1.05
CHD3-201ENST00000330494 CADP27708 2225 aa8.47□□□□□ -1.05
CHD3-201ENST00000330494 C1QTNF9BB2RNN3 333 aa8.47□□□□□ -1.05
CHD3-201ENST00000330494 TIMM23O14925 209 aa8.47□□□□□ -1.05
CHD3-201ENST00000330494 NPFFO15130 113 aa8.47□□□□□ -1.05
CHD3-201ENST00000330494 BTCP35070 178 aa8.47□□□□□ -1.05
CHD3-201ENST00000330494 C18orf12Q96KH6 178 aa8.47□□□□□ -1.05
CHD3-201ENST00000330494 TMEM133Q9H2Q1 129 aa8.47□□□□□ -1.05
CHD3-201ENST00000330494 CEACAM4O75871 244 aa8.47□□□□□ -1.05
CHD3-201ENST00000330494 VDAC2P45880 294 aaPredicted RBP8.47□□□□□ -1.05
CHD3-201ENST00000330494 LINC00205P59089 165 aa8.47□□□□□ -1.05
CHD3-201ENST00000330494 SMAGPQ0VAQ4 97 aa8.47□□□□□ -1.05
CHD3-201ENST00000330494 LURAP1LQ8IV03 231 aa8.47□□□□□ -1.05
CHD3-201ENST00000330494 OR52E5Q8NH55 327 aa8.47□□□□□ -1.05
CHD3-201ENST00000330494 PRSS2P07478 247 aa8.47□□□□□ -1.05
CHD3-201ENST00000330494 OR4D5Q8NGN0 318 aa8.47□□□□□ -1.05
CHD3-201ENST00000330494 IL18BPO95998 194 aa8.46□□□□□ -1.05
CHD3-201ENST00000330494 FAM71F2Q6NXP2 309 aa8.46□□□□□ -1.05
CHD3-201ENST00000330494 TEX29Q8N6K0 151 aa8.46□□□□□ -1.05
CHD3-201ENST00000330494 GATAD1Q8WUU5 269 aa8.46□□□□□ -1.05
CHD3-201ENST00000330494 NABP1Q96AH0 204 aa8.46□□□□□ -1.05
CHD3-201ENST00000330494 SIGMAR1Q99720 223 aa8.46□□□□□ -1.05
CHD3-201ENST00000330494 TRBV6-7A0A0A0MS04 114 aa8.46□□□□□ -1.05
CHD3-201ENST00000330494 E9PLN8 166 aa8.46□□□□□ -1.05
CHD3-201ENST00000330494 NBR2O15453 112 aa8.46□□□□□ -1.05
CHD3-201ENST00000330494 ROS1P08922 2347 aa8.46□□□□□ -1.05
CHD3-201ENST00000330494 TMEM30BQ3MIR4 351 aa8.46□□□□□ -1.05
CHD3-201ENST00000330494 NUDT10Q8NFP7 164 aa8.46□□□□□ -1.05
CHD3-201ENST00000330494 VKORC1Q9BQB6 163 aa8.46□□□□□ -1.05
CHD3-201ENST00000330494 ZNF672Q499Z4 452 aaPredicted RBP8.46□□□□□ -1.05
CHD3-201ENST00000330494 Q9H3A6 140 aa8.46□□□□□ -1.05
CHD3-201ENST00000330494 CACNA1BQ00975 2339 aa8.46□□□□□ -1.05
CHD3-201ENST00000330494 H3BUT2 72 aa8.46□□□□□ -1.06
CHD3-201ENST00000330494 MEF2CQ06413 473 aaPredicted RBP8.46□□□□□ -1.06
CHD3-201ENST00000330494 PRR31Q5SQ13 230 aa8.46□□□□□ -1.06
CHD3-201ENST00000330494 DEFB104AQ8WTQ1 72 aa8.46□□□□□ -1.06
CHD3-201ENST00000330494 TBL2Q9Y4P3 447 aaKnown RBP8.46□□□□□ -1.06
CHD3-201ENST00000330494 HOXA5P20719 270 aa8.46□□□□□ -1.06
CHD3-201ENST00000330494 CKS1BP61024 79 aa8.46□□□□□ -1.06
CHD3-201ENST00000330494 NDUFAF3Q9BU61 184 aa8.46□□□□□ -1.06
CHD3-201ENST00000330494 TMEM160Q9NX00 188 aa8.46□□□□□ -1.06
CHD3-201ENST00000330494 PEX7O00628 323 aa8.46□□□□□ -1.06
CHD3-201ENST00000330494 LGALS3P17931 250 aaKnown RBP8.46□□□□□ -1.06
CHD3-201ENST00000330494 CD33P20138 364 aa8.46□□□□□ -1.06
CHD3-201ENST00000330494 TSPOP30536 169 aa8.45□□□□□ -1.06
CHD3-201ENST00000330494 C10orf55Q5SWW7 151 aa8.45□□□□□ -1.06
CHD3-201ENST00000330494 OR4X2Q8NGF9 303 aa8.45□□□□□ -1.06
CHD3-201ENST00000330494 LINC01587Q99440 93 aa8.45□□□□□ -1.06
CHD3-201ENST00000330494 PLSCR2Q9NRY7 297 aa8.45□□□□□ -1.06
CHD3-201ENST00000330494 PYYP10082 97 aa8.45□□□□□ -1.06
CHD3-201ENST00000330494 PPIFP30405 207 aaKnown RBP8.45□□□□□ -1.06
CHD3-201ENST00000330494 BRD3OSQ6XYD6 125 aa8.45□□□□□ -1.06
CHD3-201ENST00000330494 VMO1Q7Z5L0 202 aa8.45□□□□□ -1.06
CHD3-201ENST00000330494 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.45□□□□□ -1.06
CHD3-201ENST00000330494 RNF126Q9BV68 326 aa8.45□□□□□ -1.06
CHD3-201ENST00000330494 WNK2Q9Y3S1 2297 aa8.45□□□□□ -1.06
CHD3-201ENST00000330494 IGKV3D-20A0A0C4DH25 116 aa8.45□□□□□ -1.06
CHD3-201ENST00000330494 YPEL1O60688 119 aa8.45□□□□□ -1.06
CHD3-201ENST00000330494 YPEL2Q96QA6 119 aa8.45□□□□□ -1.06
CHD3-201ENST00000330494 RNASE7Q9H1E1 156 aaKnown RBP8.45□□□□□ -1.06
CHD3-201ENST00000330494 UPK2O00526 184 aa8.45□□□□□ -1.06
CHD3-201ENST00000330494 PPP1R17O96001 155 aa8.45□□□□□ -1.06
CHD3-201ENST00000330494 TMEM200BQ69YZ2 307 aa8.45□□□□□ -1.06
CHD3-201ENST00000330494 ZNF324BQ6AW86 544 aaPredicted RBP8.45□□□□□ -1.06
CHD3-201ENST00000330494 LAMTOR2Q9Y2Q5 125 aa8.45□□□□□ -1.06
CHD3-201ENST00000330494 TANC1Q9C0D5 1861 aa8.45□□□□□ -1.06
CHD3-201ENST00000330494 RNF222A6NCQ9 220 aa8.45□□□□□ -1.06
CHD3-201ENST00000330494 SRSF3P84103 164 aaKnown RBP8.45□□□□□ -1.06
CHD3-201ENST00000330494 JOSD1Q15040 202 aaPredicted RBP8.45□□□□□ -1.06
CHD3-201ENST00000330494 ZNF525Q8N782 197 aa8.45□□□□□ -1.06
CHD3-201ENST00000330494 OR10AG1Q8NH19 301 aa8.45□□□□□ -1.06
CHD3-201ENST00000330494 PCNX1Q96RV3 2341 aa8.45□□□□□ -1.06
CHD3-201ENST00000330494 CRYGSP22914 178 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms