RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 SOSTQ9BQB4 213 aa10.74□□□□□ -0.69
CTHRC1-201ENST00000330295 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.73□□□□□ -0.69
CTHRC1-201ENST00000330295 TMEM213A2RRL7 107 aa10.73□□□□□ -0.69
CTHRC1-201ENST00000330295 IFNA10P01566 189 aa10.73□□□□□ -0.69
CTHRC1-201ENST00000330295 HLA-AP01891 365 aaKnown RBP10.73□□□□□ -0.69
CTHRC1-201ENST00000330295 OR13C7P0DN81 318 aa10.73□□□□□ -0.69
CTHRC1-201ENST00000330295 INPP1P49441 399 aa10.73□□□□□ -0.69
CTHRC1-201ENST00000330295 RBPMS2Q6ZRY4 209 aaKnown RBP10.73□□□□□ -0.69
CTHRC1-201ENST00000330295 TOMM5Q8N4H5 51 aa10.73□□□□□ -0.69
CTHRC1-201ENST00000330295 MRGPRFQ96AM1 343 aa10.73□□□□□ -0.69
CTHRC1-201ENST00000330295 PDCD10Q9BUL8 212 aa10.73□□□□□ -0.69
CTHRC1-201ENST00000330295 RBM38Q9H0Z9 239 aaKnown RBP10.73□□□□□ -0.69
CTHRC1-201ENST00000330295 KCNIP3Q9Y2W7 256 aa10.73□□□□□ -0.69
CTHRC1-201ENST00000330295 TRBV7-1A0A0A6YYK4 115 aa10.72□□□□□ -0.69
CTHRC1-201ENST00000330295 PIGBOS1A0A0B4J2F0 54 aa10.72□□□□□ -0.69
CTHRC1-201ENST00000330295 IGLC7A0M8Q6 106 aa10.72□□□□□ -0.69
CTHRC1-201ENST00000330295 C15orf61A6NNL5 157 aa10.72□□□□□ -0.69
CTHRC1-201ENST00000330295 MPTX1A8MV57 137 aa10.72□□□□□ -0.69
CTHRC1-201ENST00000330295 PPP5D1E7EU14 171 aa10.72□□□□□ -0.69
CTHRC1-201ENST00000330295 E7EUB6 86 aa10.72□□□□□ -0.69
CTHRC1-201ENST00000330295 REG1AP05451 166 aa10.72□□□□□ -0.69
CTHRC1-201ENST00000330295 MYOD1P15172 320 aa10.72□□□□□ -0.69
CTHRC1-201ENST00000330295 DHODHQ02127 395 aa10.72□□□□□ -0.69
CTHRC1-201ENST00000330295 ODF3L2Q3SX64 289 aa10.72□□□□□ -0.69
CTHRC1-201ENST00000330295 GDPD1Q8N9F7 314 aa10.72□□□□□ -0.69
CTHRC1-201ENST00000330295 OR51S1Q8NGJ8 323 aa10.72□□□□□ -0.69
CTHRC1-201ENST00000330295 DEDD2Q8WXF8 326 aa10.72□□□□□ -0.69
CTHRC1-201ENST00000330295 SEC22AQ96IW7 307 aa10.72□□□□□ -0.69
CTHRC1-201ENST00000330295 CSTL1Q9H114 145 aa10.72□□□□□ -0.69
CTHRC1-201ENST00000330295 NDUFA4L2Q9NRX3 87 aa10.72□□□□□ -0.69
CTHRC1-201ENST00000330295 TMEM14BQ9NUH8 114 aa10.72□□□□□ -0.69
CTHRC1-201ENST00000330295 NSG2Q9Y328 171 aa10.72□□□□□ -0.69
CTHRC1-201ENST00000330295 FAT1Q14517 4588 aa10.71□□□□□ -0.69
CTHRC1-201ENST00000330295 A0A1B0GW64 132 aa10.71□□□□□ -0.69
CTHRC1-201ENST00000330295 AGRNO00468 2067 aa10.71□□□□□ -0.69
CTHRC1-201ENST00000330295 GGCTO75223 188 aaKnown RBP10.71□□□□□ -0.69
CTHRC1-201ENST00000330295 OR2C1O95371 312 aa10.71□□□□□ -0.69
CTHRC1-201ENST00000330295 ADMP35318 185 aa10.71□□□□□ -0.69
CTHRC1-201ENST00000330295 ERHP84090 104 aaKnown RBP10.71□□□□□ -0.69
CTHRC1-201ENST00000330295 SLC25A24Q6NUK1 477 aa10.71□□□□□ -0.69
CTHRC1-201ENST00000330295 FAAP20Q6NZ36 180 aa10.71□□□□□ -0.69
CTHRC1-201ENST00000330295 UBE2DNLQ8IWF7 75 aa10.71□□□□□ -0.69
CTHRC1-201ENST00000330295 TP53RKQ96S44 253 aa10.71□□□□□ -0.69
CTHRC1-201ENST00000330295 NDUFAF3Q9BU61 184 aa10.71□□□□□ -0.69
CTHRC1-201ENST00000330295 DMRT1Q9Y5R6 373 aa10.71□□□□□ -0.69
CTHRC1-201ENST00000330295 IGLV11-55A0A075B6I3 123 aa10.7□□□□□ -0.7
CTHRC1-201ENST00000330295 A8MWP6 167 aa10.7□□□□□ -0.7
CTHRC1-201ENST00000330295 ANXA3P12429 323 aa10.7□□□□□ -0.7
CTHRC1-201ENST00000330295 UCP1P25874 307 aa10.7□□□□□ -0.7
CTHRC1-201ENST00000330295 ARL3P36405 182 aa10.7□□□□□ -0.7
CTHRC1-201ENST00000330295 HSPE1P61604 102 aaKnown RBP10.7□□□□□ -0.7
CTHRC1-201ENST00000330295 KLK9Q2XQG4 91 aa10.7□□□□□ -0.7
CTHRC1-201ENST00000330295 FAM106AQ4KMX7 169 aa10.7□□□□□ -0.7
CTHRC1-201ENST00000330295 GPHB5Q86YW7 130 aa10.7□□□□□ -0.7
CTHRC1-201ENST00000330295 FAM219AQ8IW50 185 aa10.7□□□□□ -0.7
CTHRC1-201ENST00000330295 OR10W1Q8NGF6 305 aa10.7□□□□□ -0.7
CTHRC1-201ENST00000330295 VN1R17PQ8TDU5 208 aa10.7□□□□□ -0.7
CTHRC1-201ENST00000330295 FANCD2OSQ96PS1 177 aa10.7□□□□□ -0.7
CTHRC1-201ENST00000330295 SPAG8Q99932 426 aaPredicted RBP10.7□□□□□ -0.7
CTHRC1-201ENST00000330295 NAA60Q9H7X0 242 aa10.7□□□□□ -0.7
CTHRC1-201ENST00000330295 ZFAND3Q9H8U3 227 aa10.7□□□□□ -0.7
CTHRC1-201ENST00000330295 ENY2Q9NPA8 101 aa10.7□□□□□ -0.7
CTHRC1-201ENST00000330295 CACFD1Q9UGQ2 172 aa10.7□□□□□ -0.7
CTHRC1-201ENST00000330295 KLK9Q9UKQ9 250 aa10.7□□□□□ -0.7
CTHRC1-201ENST00000330295 GPR132Q9UNW8 380 aa10.7□□□□□ -0.7
CTHRC1-201ENST00000330295 VPS13BQ7Z7G8 4022 aa10.7□□□□□ -0.7
CTHRC1-201ENST00000330295 CGB1A6NKQ9 187 aa10.69□□□□□ -0.7
CTHRC1-201ENST00000330295 IFNA21P01568 189 aa10.69□□□□□ -0.7
CTHRC1-201ENST00000330295 IFNA17P01571 189 aa10.69□□□□□ -0.7
CTHRC1-201ENST00000330295 ETV6P41212 452 aa10.69□□□□□ -0.7
CTHRC1-201ENST00000330295 SP6Q3SY56 376 aa10.69□□□□□ -0.7
CTHRC1-201ENST00000330295 CLEC19AQ6UXS0 136 aa10.69□□□□□ -0.7
CTHRC1-201ENST00000330295 SPATA12Q7Z6I5 190 aa10.69□□□□□ -0.7
CTHRC1-201ENST00000330295 CCDC190Q86UF4 302 aa10.69□□□□□ -0.7
CTHRC1-201ENST00000330295 SLC35G3Q8N808 338 aa10.69□□□□□ -0.7
CTHRC1-201ENST00000330295 RTBDNQ9BSG5 229 aaPredicted RBP10.69□□□□□ -0.7
CTHRC1-201ENST00000330295 TMEM222Q9H0R3 208 aa10.69□□□□□ -0.7
CTHRC1-201ENST00000330295 F11RQ9Y624 299 aaKnown RBP10.69□□□□□ -0.7
CTHRC1-201ENST00000330295 ZNF320A2RRD8 509 aa10.68□□□□□ -0.7
CTHRC1-201ENST00000330295 IGKV1-39P01597 117 aa10.68□□□□□ -0.7
CTHRC1-201ENST00000330295 IGKV1D-39P04432 117 aa10.68□□□□□ -0.7
CTHRC1-201ENST00000330295 OR5AC1P0C628 307 aa10.68□□□□□ -0.7
CTHRC1-201ENST00000330295 SNCAP37840 140 aa10.68□□□□□ -0.7
CTHRC1-201ENST00000330295 SUB1P53999 127 aaKnown RBP eCLIP10.68□□□□□ -0.7
CTHRC1-201ENST00000330295 SRPXP78539 464 aa10.68□□□□□ -0.7
CTHRC1-201ENST00000330295 PRCDQ00LT1 54 aa10.68□□□□□ -0.7
CTHRC1-201ENST00000330295 WT1-ASQ06250 92 aa10.68□□□□□ -0.7
CTHRC1-201ENST00000330295 Q5VSD8 79 aa10.68□□□□□ -0.7
CTHRC1-201ENST00000330295 TRIQKQ629K1 86 aa10.68□□□□□ -0.7
CTHRC1-201ENST00000330295 CENPSQ8N2Z9 138 aa10.68□□□□□ -0.7
CTHRC1-201ENST00000330295 Q8NAQ8 132 aa10.68□□□□□ -0.7
CTHRC1-201ENST00000330295 OR1P1Q8NH06 330 aa10.68□□□□□ -0.7
CTHRC1-201ENST00000330295 RBPMSQ93062 196 aaKnown RBP10.68□□□□□ -0.7
CTHRC1-201ENST00000330295 SLC25A21Q9BQT8 299 aaPredicted RBP10.68□□□□□ -0.7
CTHRC1-201ENST00000330295 C5orf66Q9H5L9 145 aa10.68□□□□□ -0.7
CTHRC1-201ENST00000330295 V9GYH0 126 aa10.68□□□□□ -0.7
CTHRC1-201ENST00000330295 HMCN2Q8NDA2 5059 aa10.67□□□□□ -0.7
CTHRC1-201ENST00000330295 CRYM-AS1A6NIL9 109 aa10.67□□□□□ -0.7
CTHRC1-201ENST00000330295 CDS2O95674 445 aa10.67□□□□□ -0.7
CTHRC1-201ENST00000330295 IGHV3-23P01764 117 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms