RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 NPFFO15130 113 aa11.87□□□□□ -0.51
TPM3-205ENST00000328159 MT-CO2P00403 227 aa11.87□□□□□ -0.51
TPM3-205ENST00000328159 TMEM11P17152 192 aa11.87□□□□□ -0.51
TPM3-205ENST00000328159 FAM78BQ5VT40 261 aa11.87□□□□□ -0.51
TPM3-205ENST00000328159 MIR17HGQ75NE6 70 aa11.87□□□□□ -0.51
TPM3-205ENST00000328159 NANPQ8TBE9 248 aa11.87□□□□□ -0.51
TPM3-205ENST00000328159 C19orf24Q9BVV8 132 aa11.87□□□□□ -0.51
TPM3-205ENST00000328159 DMRT1Q9Y5R6 373 aa11.87□□□□□ -0.51
TPM3-205ENST00000328159 SPG11Q96JI7 2443 aa11.87□□□□□ -0.51
TPM3-205ENST00000328159 CENPVL3A0A0U1RRI6 287 aa11.87□□□□□ -0.51
TPM3-205ENST00000328159 NCBP2LA6PVI3 153 aaKnown RBP11.87□□□□□ -0.51
TPM3-205ENST00000328159 PAX1P15863 534 aa11.87□□□□□ -0.51
TPM3-205ENST00000328159 GCHFRP30047 84 aa11.87□□□□□ -0.51
TPM3-205ENST00000328159 C22orf15Q8WYQ4 148 aa11.87□□□□□ -0.51
TPM3-205ENST00000328159 FAM208BQ5VWN6 2430 aa11.87□□□□□ -0.51
TPM3-205ENST00000328159 UBR5O95071 2799 aaPredicted RBP11.86□□□□□ -0.51
TPM3-205ENST00000328159 C11orf94C9JXX5 98 aa11.86□□□□□ -0.51
TPM3-205ENST00000328159 OR5G3P0C626 314 aa11.86□□□□□ -0.51
TPM3-205ENST00000328159 FAM106CPP0CH98 169 aa11.86□□□□□ -0.51
TPM3-205ENST00000328159 BRS3P32247 399 aa11.86□□□□□ -0.51
TPM3-205ENST00000328159 DSCR9P59020 149 aa11.86□□□□□ -0.51
TPM3-205ENST00000328159 UBE2G2P60604 165 aa11.86□□□□□ -0.51
TPM3-205ENST00000328159 SELENOTP62341 195 aa11.86□□□□□ -0.51
TPM3-205ENST00000328159 FAM120AOSQ5T036 256 aa11.86□□□□□ -0.51
TPM3-205ENST00000328159 RUSC1-AS1Q66K80 236 aa11.86□□□□□ -0.51
TPM3-205ENST00000328159 WNT10AQ9GZT5 417 aa11.86□□□□□ -0.51
TPM3-205ENST00000328159 COL12A1Q99715 3063 aa11.85□□□□□ -0.51
TPM3-205ENST00000328159 ZNF727A8MUV8 499 aa11.85□□□□□ -0.51
TPM3-205ENST00000328159 TSPAN9O75954 239 aa11.85□□□□□ -0.51
TPM3-205ENST00000328159 CTRB1P17538 263 aa11.85□□□□□ -0.51
TPM3-205ENST00000328159 ZNF90Q03938 601 aa11.85□□□□□ -0.51
TPM3-205ENST00000328159 CST9LP1Q5W188 147 aa11.85□□□□□ -0.51
TPM3-205ENST00000328159 CTRB2Q6GPI1 263 aa11.85□□□□□ -0.51
TPM3-205ENST00000328159 PIP4P2Q8N4L2 257 aa11.85□□□□□ -0.51
TPM3-205ENST00000328159 TMEM116Q8NCL8 245 aa11.85□□□□□ -0.51
TPM3-205ENST00000328159 RNF2Q99496 336 aa11.85□□□□□ -0.51
TPM3-205ENST00000328159 TNFRSF19Q9NS68 423 aa11.85□□□□□ -0.51
TPM3-205ENST00000328159 TECRQ9NZ01 308 aaKnown RBP11.85□□□□□ -0.51
TPM3-205ENST00000328159 IGHV3-21A0A0B4J1V1 117 aa11.84□□□□□ -0.51
TPM3-205ENST00000328159 PSMB11A5LHX3 300 aa11.84□□□□□ -0.51
TPM3-205ENST00000328159 CX3CL1P78423 397 aa11.84□□□□□ -0.51
TPM3-205ENST00000328159 ZNF562Q6V9R5 426 aa11.84□□□□□ -0.51
TPM3-205ENST00000328159 TMEM37Q8WXS4 190 aa11.84□□□□□ -0.51
TPM3-205ENST00000328159 RPUSD4Q96CM3 377 aaKnown RBP11.84□□□□□ -0.51
TPM3-205ENST00000328159 TRGV9Q99603 122 aa11.84□□□□□ -0.51
TPM3-205ENST00000328159 SMIM7Q9BQ49 75 aa11.84□□□□□ -0.51
TPM3-205ENST00000328159 FAM103A1Q9BTL3 118 aaKnown RBP11.84□□□□□ -0.51
TPM3-205ENST00000328159 MRPL32Q9BYC8 188 aaKnown RBP11.84□□□□□ -0.51
TPM3-205ENST00000328159 TUBA4BQ9H853 241 aa11.84□□□□□ -0.51
TPM3-205ENST00000328159 LRRK2Q5S007 2527 aa11.84□□□□□ -0.51
TPM3-205ENST00000328159 I3L2K1 104 aa11.84□□□□□ -0.51
TPM3-205ENST00000328159 ATF4P18848 351 aaPredicted RBP11.84□□□□□ -0.51
TPM3-205ENST00000328159 ATP5G3P48201 142 aa11.84□□□□□ -0.51
TPM3-205ENST00000328159 PNRC1Q12796 327 aaPredicted RBP11.84□□□□□ -0.51
TPM3-205ENST00000328159 ZNF674Q2M3X9 581 aa11.84□□□□□ -0.51
TPM3-205ENST00000328159 OR1L6Q8NGR2 347 aa11.84□□□□□ -0.51
TPM3-205ENST00000328159 OR1L4Q8NGR5 311 aa11.84□□□□□ -0.51
TPM3-205ENST00000328159 ARPC1AQ92747 370 aa11.84□□□□□ -0.51
TPM3-205ENST00000328159 TXNDC17Q9BRA2 123 aa11.84□□□□□ -0.51
TPM3-205ENST00000328159 SDF2L1Q9HCN8 221 aa11.84□□□□□ -0.51
TPM3-205ENST00000328159 DNAJC4Q9NNZ3 241 aa11.84□□□□□ -0.51
TPM3-205ENST00000328159 C1RLQ9NZP8 487 aa11.84□□□□□ -0.51
TPM3-205ENST00000328159 A0A087WWC5 75 aa11.83□□□□□ -0.52
TPM3-205ENST00000328159 IGHV1-69DA0A0B4J2H0 117 aa11.83□□□□□ -0.52
TPM3-205ENST00000328159 COLCA2A8K830 154 aa11.83□□□□□ -0.52
TPM3-205ENST00000328159 PDE6DO43924 150 aa11.83□□□□□ -0.52
TPM3-205ENST00000328159 COX7A2P2O60397 106 aa11.83□□□□□ -0.52
TPM3-205ENST00000328159 CLN5O75503 358 aa11.83□□□□□ -0.52
TPM3-205ENST00000328159 IGHV1-69P01742 117 aa11.83□□□□□ -0.52
TPM3-205ENST00000328159 TAS2R45P59539 299 aa11.83□□□□□ -0.52
TPM3-205ENST00000328159 C15orf54Q8N8G6 183 aa11.83□□□□□ -0.52
TPM3-205ENST00000328159 Q8N9W7 124 aa11.83□□□□□ -0.52
TPM3-205ENST00000328159 OR4X1Q8NH49 305 aa11.83□□□□□ -0.52
TPM3-205ENST00000328159 PFDN5Q99471 154 aa11.83□□□□□ -0.52
TPM3-205ENST00000328159 PARLQ9H300 379 aa11.83□□□□□ -0.52
TPM3-205ENST00000328159 NAT8Q9UHE5 227 aa11.83□□□□□ -0.52
TPM3-205ENST00000328159 B4DEV8 164 aa11.82□□□□□ -0.52
TPM3-205ENST00000328159 F6UZH7 168 aa11.82□□□□□ -0.52
TPM3-205ENST00000328159 BPIFB3P59826 476 aa11.82□□□□□ -0.52
TPM3-205ENST00000328159 NDPQ00604 133 aa11.82□□□□□ -0.52
TPM3-205ENST00000328159 PQLC2Q6ZP29 291 aa11.82□□□□□ -0.52
TPM3-205ENST00000328159 TMEM167BQ9NRX6 74 aa11.82□□□□□ -0.52
TPM3-205ENST00000328159 DOK5Q9P104 306 aa11.82□□□□□ -0.52
TPM3-205ENST00000328159 YTHDF2Q9Y5A9 579 aaKnown RBP11.82□□□□□ -0.52
TPM3-205ENST00000328159 IGHV3OR16-10A0A075B7F0 116 aa11.82□□□□□ -0.52
TPM3-205ENST00000328159 NPIPB5A8MRT5 1133 aa11.82□□□□□ -0.52
TPM3-205ENST00000328159 MSMBP08118 114 aa11.82□□□□□ -0.52
TPM3-205ENST00000328159 C8orf88P0DMB2 117 aa11.82□□□□□ -0.52
TPM3-205ENST00000328159 SLC25A16P16260 332 aa11.82□□□□□ -0.52
TPM3-205ENST00000328159 NPPCP23582 126 aa11.82□□□□□ -0.52
TPM3-205ENST00000328159 KIAA0141Q14154 515 aaPredicted RBP11.82□□□□□ -0.52
TPM3-205ENST00000328159 TMEM241Q24JQ0 296 aa11.82□□□□□ -0.52
TPM3-205ENST00000328159 CLEC12BQ2HXU8 276 aa11.82□□□□□ -0.52
TPM3-205ENST00000328159 ASPHD1Q5U4P2 390 aa11.82□□□□□ -0.52
TPM3-205ENST00000328159 C10orf113Q5VZT2 155 aa11.82□□□□□ -0.52
TPM3-205ENST00000328159 PATE2Q6UY27 113 aa11.82□□□□□ -0.52
TPM3-205ENST00000328159 ZNF503Q96F45 646 aa11.82□□□□□ -0.52
TPM3-205ENST00000328159 OR7C2O60412 319 aa11.81□□□□□ -0.52
TPM3-205ENST00000328159 ISOC2Q96AB3 205 aa11.81□□□□□ -0.52
TPM3-205ENST00000328159 UTP20O75691 2785 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms