RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 CCDC71LQ8N9Z2 235 aa9.04□□□□□ -0.96
TPM3-204ENST00000323144 DUSP18Q8NEJ0 188 aa9.04□□□□□ -0.96
TPM3-204ENST00000323144 PHLDA1Q8WV24 401 aaPredicted RBP9.04□□□□□ -0.96
TPM3-204ENST00000323144 PDCD10Q9BUL8 212 aa9.04□□□□□ -0.96
TPM3-204ENST00000323144 C6orf62Q9GZU0 229 aaPredicted RBP9.04□□□□□ -0.96
TPM3-204ENST00000323144 C11orf68Q9H3H3 251 aaKnown RBP9.04□□□□□ -0.96
TPM3-204ENST00000323144 PRR13Q9NZ81 148 aa9.04□□□□□ -0.96
TPM3-204ENST00000323144 COPZ2Q9P299 210 aa9.04□□□□□ -0.96
TPM3-204ENST00000323144 AGRNO00468 2067 aa9.04□□□□□ -0.96
TPM3-204ENST00000323144 TMEM50AO95807 157 aa9.03□□□□□ -0.96
TPM3-204ENST00000323144 ATF4P18848 351 aaPredicted RBP9.03□□□□□ -0.96
TPM3-204ENST00000323144 SNCAP37840 140 aa9.03□□□□□ -0.96
TPM3-204ENST00000323144 NPBWR1P48145 328 aa9.03□□□□□ -0.96
TPM3-204ENST00000323144 TAS2R19P59542 299 aa9.03□□□□□ -0.96
TPM3-204ENST00000323144 MLANAQ16655 118 aa9.03□□□□□ -0.96
TPM3-204ENST00000323144 TIGITQ495A1 244 aa9.03□□□□□ -0.96
TPM3-204ENST00000323144 STEAP1BQ6NZ63 245 aa9.03□□□□□ -0.96
TPM3-204ENST00000323144 TMEM229BQ8NBD8 167 aa9.03□□□□□ -0.96
TPM3-204ENST00000323144 STXBP6Q8NFX7 210 aa9.03□□□□□ -0.96
TPM3-204ENST00000323144 CSTL1Q9H114 145 aa9.03□□□□□ -0.96
TPM3-204ENST00000323144 RABAC1Q9UI14 185 aa9.03□□□□□ -0.96
TPM3-204ENST00000323144 KMT2AQ03164 3969 aa9.03□□□□□ -0.96
TPM3-204ENST00000323144 GABARAPH6UMI1 98 aa9.02□□□□□ -0.97
TPM3-204ENST00000323144 CORTO00230 105 aa9.02□□□□□ -0.97
TPM3-204ENST00000323144 CLN5O75503 358 aa9.02□□□□□ -0.97
TPM3-204ENST00000323144 IGKV1-17P01599 117 aa9.02□□□□□ -0.97
TPM3-204ENST00000323144 ZNF688P0C7X2 276 aa9.02□□□□□ -0.97
TPM3-204ENST00000323144 P2RY1P47900 373 aa9.02□□□□□ -0.97
TPM3-204ENST00000323144 RPL11P62913 178 aaKnown RBP9.02□□□□□ -0.97
TPM3-204ENST00000323144 MEF2DQ14814 521 aa9.02□□□□□ -0.97
TPM3-204ENST00000323144 TMEM217Q8N7C4 229 aa9.02□□□□□ -0.97
TPM3-204ENST00000323144 OR4C16Q8NGL9 310 aa9.02□□□□□ -0.97
TPM3-204ENST00000323144 OR11H2Q8NH07 326 aa9.02□□□□□ -0.97
TPM3-204ENST00000323144 GATAD1Q8WUU5 269 aa9.02□□□□□ -0.97
TPM3-204ENST00000323144 TMEM170AQ8WVE7 144 aa9.02□□□□□ -0.97
TPM3-204ENST00000323144 SMIM4Q8WVI0 70 aa9.02□□□□□ -0.97
TPM3-204ENST00000323144 RARRES2Q99969 163 aa9.02□□□□□ -0.97
TPM3-204ENST00000323144 TMEM222Q9H0R3 208 aa9.02□□□□□ -0.97
TPM3-204ENST00000323144 NAA60Q9H7X0 242 aa9.02□□□□□ -0.97
TPM3-204ENST00000323144 CACNG5Q9UF02 275 aa9.02□□□□□ -0.97
TPM3-204ENST00000323144 FBXL17Q9UF56 701 aa9.02□□□□□ -0.97
TPM3-204ENST00000323144 VPS13DQ5THJ4 4388 aa9.01□□□□□ -0.97
TPM3-204ENST00000323144 KNCNA6PVL3 124 aa9.01□□□□□ -0.97
TPM3-204ENST00000323144 K7EQG2 157 aa9.01□□□□□ -0.97
TPM3-204ENST00000323144 RGS5O15539 181 aa9.01□□□□□ -0.97
TPM3-204ENST00000323144 RND2P52198 227 aa9.01□□□□□ -0.97
TPM3-204ENST00000323144 AARDQ4LEZ3 155 aa9.01□□□□□ -0.97
TPM3-204ENST00000323144 TRPT1Q86TN4 253 aaKnown RBP9.01□□□□□ -0.97
TPM3-204ENST00000323144 Q8NAQ8 132 aa9.01□□□□□ -0.97
TPM3-204ENST00000323144 TERB2Q8NHR7 220 aa9.01□□□□□ -0.97
TPM3-204ENST00000323144 ZFAND1Q8TCF1 268 aa9.01□□□□□ -0.97
TPM3-204ENST00000323144 RRNAD1Q96FB5 475 aaKnown RBP9.01□□□□□ -0.97
TPM3-204ENST00000323144 RTBDNQ9BSG5 229 aaPredicted RBP9.01□□□□□ -0.97
TPM3-204ENST00000323144 ENY2Q9NPA8 101 aa9.01□□□□□ -0.97
TPM3-204ENST00000323144 KLK5Q9Y337 293 aaPredicted RBP9.01□□□□□ -0.97
TPM3-204ENST00000323144 DNAH10Q8IVF4 4471 aa9□□□□□ -0.97
TPM3-204ENST00000323144 TRAV2A0A0B4J234 112 aa9□□□□□ -0.97
TPM3-204ENST00000323144 DNASE2O00115 360 aaPredicted RBP9□□□□□ -0.97
TPM3-204ENST00000323144 CTDSP2O14595 271 aa9□□□□□ -0.97
TPM3-204ENST00000323144 ATG12O94817 140 aa9□□□□□ -0.97
TPM3-204ENST00000323144 GIG44P09565 113 aaPredicted RBP9□□□□□ -0.97
TPM3-204ENST00000323144 IGLC1P0CG04 106 aa9□□□□□ -0.97
TPM3-204ENST00000323144 ALDH3B2P48448 385 aa9□□□□□ -0.97
TPM3-204ENST00000323144 PAFAH1B2P68402 229 aa9□□□□□ -0.97
TPM3-204ENST00000323144 RBMS2Q15434 407 aaKnown RBP9□□□□□ -0.97
TPM3-204ENST00000323144 TMEM268Q5VZI3 342 aa9□□□□□ -0.97
TPM3-204ENST00000323144 SELENOHQ8IZQ5 122 aaKnown RBP9□□□□□ -0.97
TPM3-204ENST00000323144 SLC24A4Q8NFF2 622 aa9□□□□□ -0.97
TPM3-204ENST00000323144 OR4X1Q8NH49 305 aa9□□□□□ -0.97
TPM3-204ENST00000323144 GLYATL2Q8WU03 294 aa9□□□□□ -0.97
TPM3-204ENST00000323144 RBPMSQ93062 196 aaKnown RBP9□□□□□ -0.97
TPM3-204ENST00000323144 TMEM230Q96A57 120 aa9□□□□□ -0.97
TPM3-204ENST00000323144 METTL26Q96S19 204 aa9□□□□□ -0.97
TPM3-204ENST00000323144 MRPS26Q9BYN8 205 aaKnown RBP9□□□□□ -0.97
TPM3-204ENST00000323144 TMEM231Q9H6L2 316 aa9□□□□□ -0.97
TPM3-204ENST00000323144 C14orf166Q9Y224 244 aaKnown RBP9□□□□□ -0.97
TPM3-204ENST00000323144 DNAH6Q9C0G6 4158 aa9□□□□□ -0.97
TPM3-204ENST00000323144 HECTD4Q9Y4D8 3996 aa8.99□□□□□ -0.97
TPM3-204ENST00000323144 CRYM-AS1A6NIL9 109 aa8.99□□□□□ -0.97
TPM3-204ENST00000323144 CDS2O95674 445 aa8.99□□□□□ -0.97
TPM3-204ENST00000323144 CRYBB3P26998 211 aa8.99□□□□□ -0.97
TPM3-204ENST00000323144 SUB1P53999 127 aaKnown RBP eCLIP8.99□□□□□ -0.97
TPM3-204ENST00000323144 SPCS3P61009 180 aa8.99□□□□□ -0.97
TPM3-204ENST00000323144 TMEM187Q14656 261 aa8.99□□□□□ -0.97
TPM3-204ENST00000323144 USF2Q15853 346 aaPredicted RBP8.99□□□□□ -0.97
TPM3-204ENST00000323144 PRSS54Q6PEW0 395 aa8.99□□□□□ -0.97
TPM3-204ENST00000323144 GPR141Q7Z602 305 aa8.99□□□□□ -0.97
TPM3-204ENST00000323144 C11orf45Q8TAV5 145 aa8.99□□□□□ -0.97
TPM3-204ENST00000323144 DCANP1Q8TF63 244 aa8.99□□□□□ -0.97
TPM3-204ENST00000323144 GPR146Q96CH1 333 aa8.99□□□□□ -0.97
TPM3-204ENST00000323144 IGHV4-28A0A0C4DH34 117 aa8.98□□□□□ -0.97
TPM3-204ENST00000323144 TEX13DA0A0J9YY54 714 aaPredicted RBP8.98□□□□□ -0.97
TPM3-204ENST00000323144 AKAIN1P0CW23 69 aa8.98□□□□□ -0.97
TPM3-204ENST00000323144 NPPCP23582 126 aa8.98□□□□□ -0.97
TPM3-204ENST00000323144 RPL5P46777 297 aaKnown RBP8.98□□□□□ -0.97
TPM3-204ENST00000323144 PRR20EP86478 221 aa8.98□□□□□ -0.97
TPM3-204ENST00000323144 PRR20CP86479 221 aa8.98□□□□□ -0.97
TPM3-204ENST00000323144 PRR20DP86480 221 aa8.98□□□□□ -0.97
TPM3-204ENST00000323144 PRR20BP86481 221 aa8.98□□□□□ -0.97
TPM3-204ENST00000323144 PRR20AP86496 221 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms