RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 ZNF431Q8TF32 576 aaPredicted RBP12.59□□□□□ -0.39
LRRC42-201ENST00000319223 OR10C1Q96KK4 312 aa12.59□□□□□ -0.39
LRRC42-201ENST00000319223 TXN2Q99757 166 aa12.59□□□□□ -0.39
LRRC42-201ENST00000319223 CORTO00230 105 aa12.59□□□□□ -0.39
LRRC42-201ENST00000319223 IFNA10P01566 189 aa12.59□□□□□ -0.39
LRRC42-201ENST00000319223 FOLR2P14207 255 aa12.59□□□□□ -0.39
LRRC42-201ENST00000319223 SPSB3Q6PJ21 355 aa12.59□□□□□ -0.39
LRRC42-201ENST00000319223 DUSP18Q8NEJ0 188 aa12.59□□□□□ -0.39
LRRC42-201ENST00000319223 SIGLEC8Q9NYZ4 499 aa12.59□□□□□ -0.39
LRRC42-201ENST00000319223 ZNF256Q9Y2P7 627 aaPredicted RBP12.59□□□□□ -0.39
LRRC42-201ENST00000319223 PRKDCP78527 4128 aaKnown RBP12.58□□□□□ -0.4
LRRC42-201ENST00000319223 IZUMO1RA6ND01 250 aa12.58□□□□□ -0.4
LRRC42-201ENST00000319223 FAM90A26D6RGX4 464 aa12.58□□□□□ -0.4
LRRC42-201ENST00000319223 CCSO14618 274 aa12.58□□□□□ -0.4
LRRC42-201ENST00000319223 IFNA21P01568 189 aa12.58□□□□□ -0.4
LRRC42-201ENST00000319223 UXS1Q8NBZ7 420 aa12.58□□□□□ -0.4
LRRC42-201ENST00000319223 OR4D5Q8NGN0 318 aa12.58□□□□□ -0.4
LRRC42-201ENST00000319223 U3KQ87 197 aa12.58□□□□□ -0.4
LRRC42-201ENST00000319223 A8MWP6 167 aa12.57□□□□□ -0.4
LRRC42-201ENST00000319223 GNG7O60262 68 aa12.57□□□□□ -0.4
LRRC42-201ENST00000319223 LY86O95711 162 aa12.57□□□□□ -0.4
LRRC42-201ENST00000319223 TMEM50AO95807 157 aa12.57□□□□□ -0.4
LRRC42-201ENST00000319223 CBLN1P23435 193 aa12.57□□□□□ -0.4
LRRC42-201ENST00000319223 ID3Q02535 119 aa12.57□□□□□ -0.4
LRRC42-201ENST00000319223 WRBO00258 174 aa12.57□□□□□ -0.4
LRRC42-201ENST00000319223 NUPL2O15504 423 aaKnown RBP12.57□□□□□ -0.4
LRRC42-201ENST00000319223 SYNGR2O43760 224 aa12.57□□□□□ -0.4
LRRC42-201ENST00000319223 POLR2GP62487 172 aaKnown RBP eCLIP12.57□□□□□ -0.4
LRRC42-201ENST00000319223 RNASEH2CQ8TDP1 164 aaKnown RBP12.57□□□□□ -0.4
LRRC42-201ENST00000319223 TMEM190Q8WZ59 177 aa12.57□□□□□ -0.4
LRRC42-201ENST00000319223 GAR1Q9NY12 217 aaKnown RBP12.57□□□□□ -0.4
LRRC42-201ENST00000319223 ZMAT5Q9UDW3 170 aaKnown RBP12.57□□□□□ -0.4
LRRC42-201ENST00000319223 C15orf62A8K5M9 175 aa12.56□□□□□ -0.4
LRRC42-201ENST00000319223 NDUFA4O00483 81 aa12.56□□□□□ -0.4
LRRC42-201ENST00000319223 ZNF207O43670 478 aaKnown RBP12.56□□□□□ -0.4
LRRC42-201ENST00000319223 IL5P05113 134 aa12.56□□□□□ -0.4
LRRC42-201ENST00000319223 GP9P14770 177 aa12.56□□□□□ -0.4
LRRC42-201ENST00000319223 NPBWR1P48145 328 aa12.56□□□□□ -0.4
LRRC42-201ENST00000319223 IAH1Q2TAA2 248 aaPredicted RBP12.56□□□□□ -0.4
LRRC42-201ENST00000319223 DEFB114Q30KQ6 69 aa12.56□□□□□ -0.4
LRRC42-201ENST00000319223 CD300EQ496F6 205 aaPredicted RBP12.56□□□□□ -0.4
LRRC42-201ENST00000319223 PRSS54Q6PEW0 395 aa12.56□□□□□ -0.4
LRRC42-201ENST00000319223 C12orf45Q8N5I9 185 aaPredicted RBP12.56□□□□□ -0.4
LRRC42-201ENST00000319223 ZBTB8BQ8NAP8 495 aaPredicted RBP12.56□□□□□ -0.4
LRRC42-201ENST00000319223 OR4X1Q8NH49 305 aa12.56□□□□□ -0.4
LRRC42-201ENST00000319223 C20orf24Q9BUV8 137 aa12.56□□□□□ -0.4
LRRC42-201ENST00000319223 CLN5O75503 358 aa12.55□□□□□ -0.4
LRRC42-201ENST00000319223 MED6O75586 246 aa12.55□□□□□ -0.4
LRRC42-201ENST00000319223 DEFB121Q5J5C9 76 aa12.55□□□□□ -0.4
LRRC42-201ENST00000319223 MLXQ9UH92 298 aa12.55□□□□□ -0.4
LRRC42-201ENST00000319223 SORL1Q92673 2214 aa12.55□□□□□ -0.4
LRRC42-201ENST00000319223 C8orf88P0DMB2 117 aa12.54□□□□□ -0.4
LRRC42-201ENST00000319223 NKX2-1P43699 371 aaPredicted RBP12.54□□□□□ -0.4
LRRC42-201ENST00000319223 RND2P52198 227 aa12.54□□□□□ -0.4
LRRC42-201ENST00000319223 DEFA1P59665 94 aa12.54□□□□□ -0.4
LRRC42-201ENST00000319223 DEFA3P59666 94 aa12.54□□□□□ -0.4
LRRC42-201ENST00000319223 PALMDQ9NP74 551 aa12.54□□□□□ -0.4
LRRC42-201ENST00000319223 GSKIPQ9P0R6 139 aa12.54□□□□□ -0.4
LRRC42-201ENST00000319223 UFC1Q9Y3C8 167 aa12.54□□□□□ -0.4
LRRC42-201ENST00000319223 LSM4Q9Y4Z0 139 aaKnown RBP12.54□□□□□ -0.4
LRRC42-201ENST00000319223 RPS10-NUDT3A0A1W2PQS6 291 aa12.54□□□□□ -0.4
LRRC42-201ENST00000319223 INMT-MINDY4F8WBC2 141 aa12.54□□□□□ -0.4
LRRC42-201ENST00000319223 H3BP45 60 aa12.54□□□□□ -0.4
LRRC42-201ENST00000319223 IFNA4P05014 189 aa12.54□□□□□ -0.4
LRRC42-201ENST00000319223 RELQ04864 619 aaPredicted RBP12.54□□□□□ -0.4
LRRC42-201ENST00000319223 CD69Q07108 199 aa12.54□□□□□ -0.4
LRRC42-201ENST00000319223 NOXA1Q86UR1 476 aa12.54□□□□□ -0.4
LRRC42-201ENST00000319223 DYNLRB2Q8TF09 96 aa12.54□□□□□ -0.4
LRRC42-201ENST00000319223 MARVELD1Q9BSK0 173 aa12.54□□□□□ -0.4
LRRC42-201ENST00000319223 FAM25EA8MYX2 175 aa12.53□□□□□ -0.4
LRRC42-201ENST00000319223 YIF1AO95070 293 aa12.53□□□□□ -0.4
LRRC42-201ENST00000319223 SCGB1D2O95969 90 aa12.53□□□□□ -0.4
LRRC42-201ENST00000319223 IGKV1-17P01599 117 aa12.53□□□□□ -0.4
LRRC42-201ENST00000319223 ELLP55199 621 aaPredicted RBP12.53□□□□□ -0.4
LRRC42-201ENST00000319223 PAX9P55771 341 aa12.53□□□□□ -0.4
LRRC42-201ENST00000319223 TIGITQ495A1 244 aa12.53□□□□□ -0.4
LRRC42-201ENST00000319223 BTNL8Q6UX41 500 aa12.53□□□□□ -0.4
LRRC42-201ENST00000319223 TOMM20LQ6UXN7 152 aa12.53□□□□□ -0.4
LRRC42-201ENST00000319223 SLC16A13Q7RTY0 426 aa12.53□□□□□ -0.4
LRRC42-201ENST00000319223 TMEM116Q8NCL8 245 aa12.53□□□□□ -0.4
LRRC42-201ENST00000319223 NPIPB3Q92617 1050 aa12.53□□□□□ -0.4
LRRC42-201ENST00000319223 PAIP2BQ9ULR5 123 aaKnown RBP12.53□□□□□ -0.4
LRRC42-201ENST00000319223 ZNF785A8K8V0 405 aa12.52□□□□□ -0.41
LRRC42-201ENST00000319223 SSSCA1O60232 199 aa12.52□□□□□ -0.41
LRRC42-201ENST00000319223 SLC25A4P12235 298 aa12.52□□□□□ -0.41
LRRC42-201ENST00000319223 SPANXN5Q5MJ07 72 aa12.52□□□□□ -0.41
LRRC42-201ENST00000319223 ACY3Q96HD9 319 aa12.52□□□□□ -0.41
LRRC42-201ENST00000319223 CIB3Q96Q77 187 aaPredicted RBP12.52□□□□□ -0.41
LRRC42-201ENST00000319223 DAZ1Q9NQZ3 744 aaKnown RBP12.52□□□□□ -0.41
LRRC42-201ENST00000319223 MRPL27Q9P0M9 148 aaKnown RBP12.52□□□□□ -0.41
LRRC42-201ENST00000319223 PUS1Q9Y606 427 aaKnown RBP eCLIP12.52□□□□□ -0.41
LRRC42-201ENST00000319223 MBPP02686 304 aaPredicted RBP12.51□□□□□ -0.41
LRRC42-201ENST00000319223 IGLC1P0CG04 106 aa12.51□□□□□ -0.41
LRRC42-201ENST00000319223 ATP5IP56385 69 aaPredicted RBP12.51□□□□□ -0.41
LRRC42-201ENST00000319223 LCN12Q6JVE5 192 aa12.51□□□□□ -0.41
LRRC42-201ENST00000319223 ZNF600Q6ZNG1 722 aa12.51□□□□□ -0.41
LRRC42-201ENST00000319223 Q8N1Y9 231 aa12.51□□□□□ -0.41
LRRC42-201ENST00000319223 WDR89Q96FK6 387 aaPredicted RBP12.51□□□□□ -0.41
LRRC42-201ENST00000319223 ZFAND3Q9H8U3 227 aa12.51□□□□□ -0.41
LRRC42-201ENST00000319223 TECRQ9NZ01 308 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms