RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 ZNF826PQ6ZT77 177 aa13.09□□□□□ -0.31
HCFC1-201ENST00000310441 ZNF708P17019 499 aa13.09□□□□□ -0.31
HCFC1-201ENST00000310441 FBLN7Q53RD9 439 aa13.09□□□□□ -0.31
HCFC1-201ENST00000310441 DPH3P1Q9H4G8 78 aa13.09□□□□□ -0.31
HCFC1-201ENST00000310441 CHTOPQ9Y3Y2 248 aaKnown RBP13.09□□□□□ -0.31
HCFC1-201ENST00000310441 UCP1P25874 307 aa13.08□□□□□ -0.31
HCFC1-201ENST00000310441 SAMD5Q5TGI4 173 aa13.08□□□□□ -0.31
HCFC1-201ENST00000310441 FAM89BQ8N5H3 189 aa13.08□□□□□ -0.31
HCFC1-201ENST00000310441 FAM168AQ92567 244 aa13.08□□□□□ -0.31
HCFC1-201ENST00000310441 SLC25A38Q96DW6 304 aa13.08□□□□□ -0.31
HCFC1-201ENST00000310441 CCL20P78556 96 aa13.08□□□□□ -0.32
HCFC1-201ENST00000310441 IGKV3-20P01619 116 aa13.08□□□□□ -0.32
HCFC1-201ENST00000310441 H3BUT2 72 aa13.08□□□□□ -0.32
HCFC1-201ENST00000310441 SAA1P0DJI8 122 aaPredicted RBP13.08□□□□□ -0.32
HCFC1-201ENST00000310441 NDUFAF3Q9BU61 184 aa13.08□□□□□ -0.32
HCFC1-201ENST00000310441 STPG1Q5TH74 334 aa13.08□□□□□ -0.32
HCFC1-201ENST00000310441 VKORC1Q9BQB6 163 aa13.08□□□□□ -0.32
HCFC1-201ENST00000310441 HS3ST3B1Q9Y662 390 aa13.08□□□□□ -0.32
HCFC1-201ENST00000310441 TMEM14DPA8MWL7 114 aa13.08□□□□□ -0.32
HCFC1-201ENST00000310441 TDGF1P3P51864 188 aa13.08□□□□□ -0.32
HCFC1-201ENST00000310441 PLPPR1Q8TBJ4 325 aa13.08□□□□□ -0.32
HCFC1-201ENST00000310441 TMEM242Q9NWH2 141 aa13.08□□□□□ -0.32
HCFC1-201ENST00000310441 ERG28Q9UKR5 140 aa13.08□□□□□ -0.32
HCFC1-201ENST00000310441 A8MXK9 166 aa13.07□□□□□ -0.32
HCFC1-201ENST00000310441 IGKV1D-33P01593 117 aa13.07□□□□□ -0.32
HCFC1-201ENST00000310441 IGKV1-33P01594 117 aa13.07□□□□□ -0.32
HCFC1-201ENST00000310441 NRN1Q9NPD7 142 aa13.07□□□□□ -0.32
HCFC1-201ENST00000310441 NHP2Q9NX24 153 aaKnown RBP13.07□□□□□ -0.32
HCFC1-201ENST00000310441 DTX4Q9Y2E6 619 aa13.07□□□□□ -0.32
HCFC1-201ENST00000310441 OSTCQ9NRP0 149 aa13.07□□□□□ -0.32
HCFC1-201ENST00000310441 SCO2A0A1W2PP80 73 aa13.07□□□□□ -0.32
HCFC1-201ENST00000310441 TOMM40O96008 361 aa13.07□□□□□ -0.32
HCFC1-201ENST00000310441 PEAR1Q5VY43 1037 aaPredicted RBP13.07□□□□□ -0.32
HCFC1-201ENST00000310441 TMEM170AQ8WVE7 144 aa13.07□□□□□ -0.32
HCFC1-201ENST00000310441 MEGF9Q9H1U4 602 aa13.07□□□□□ -0.32
HCFC1-201ENST00000310441 LILRA1O75019 489 aa13.07□□□□□ -0.32
HCFC1-201ENST00000310441 CD28P10747 220 aa13.07□□□□□ -0.32
HCFC1-201ENST00000310441 RHOGP84095 191 aa13.07□□□□□ -0.32
HCFC1-201ENST00000310441 FAM166AQ6J272 317 aa13.07□□□□□ -0.32
HCFC1-201ENST00000310441 SPANXCQ9NY87 97 aa13.07□□□□□ -0.32
HCFC1-201ENST00000310441 SIPA1L1O43166 1804 aa13.07□□□□□ -0.32
HCFC1-201ENST00000310441 VDAC2P45880 294 aaPredicted RBP13.07□□□□□ -0.32
HCFC1-201ENST00000310441 HAPLN4Q86UW8 402 aa13.07□□□□□ -0.32
HCFC1-201ENST00000310441 SPINK2P20155 84 aa13.06□□□□□ -0.32
HCFC1-201ENST00000310441 RFLNBQ8N5W9 214 aa13.06□□□□□ -0.32
HCFC1-201ENST00000310441 ASCL4Q6XD76 172 aa13.06□□□□□ -0.32
HCFC1-201ENST00000310441 IGFBP6P24592 240 aaPredicted RBP13.06□□□□□ -0.32
HCFC1-201ENST00000310441 RPP25Q9BUL9 199 aaKnown RBP13.06□□□□□ -0.32
HCFC1-201ENST00000310441 COX11Q9Y6N1 276 aa13.06□□□□□ -0.32
HCFC1-201ENST00000310441 ERVH48-1M5A8F1 160 aa13.06□□□□□ -0.32
HCFC1-201ENST00000310441 IFITM2Q01629 132 aa13.06□□□□□ -0.32
HCFC1-201ENST00000310441 SLC25A48Q6ZT89 311 aaKnown RBP13.06□□□□□ -0.32
HCFC1-201ENST00000310441 LHFPL4Q7Z7J7 247 aa13.06□□□□□ -0.32
HCFC1-201ENST00000310441 PRADC1Q9BSG0 188 aa13.06□□□□□ -0.32
HCFC1-201ENST00000310441 UPK2O00526 184 aa13.06□□□□□ -0.32
HCFC1-201ENST00000310441 FAM181AQ8N9Y4 354 aa13.06□□□□□ -0.32
HCFC1-201ENST00000310441 GREB1LQ9C091 1923 aaPredicted RBP13.06□□□□□ -0.32
HCFC1-201ENST00000310441 NTN1O95631 604 aa13.06□□□□□ -0.32
HCFC1-201ENST00000310441 NBR2O15453 112 aa13.05□□□□□ -0.32
HCFC1-201ENST00000310441 DLX4Q92988 240 aaPredicted RBP13.05□□□□□ -0.32
HCFC1-201ENST00000310441 ABHD17AQ96GS6 310 aa13.05□□□□□ -0.32
HCFC1-201ENST00000310441 TMEM144Q7Z5S9 345 aa13.05□□□□□ -0.32
HCFC1-201ENST00000310441 LEPROTO15243 131 aa13.05□□□□□ -0.32
HCFC1-201ENST00000310441 COL11A2P13942 1736 aaPredicted RBP13.05□□□□□ -0.32
HCFC1-201ENST00000310441 SIRT4Q9Y6E7 314 aaPredicted RBP13.05□□□□□ -0.32
HCFC1-201ENST00000310441 NR2C2APQ86WQ0 139 aa13.05□□□□□ -0.32
HCFC1-201ENST00000310441 NRXN2Q9P2S2 1712 aa13.05□□□□□ -0.32
HCFC1-201ENST00000310441 KLF12Q9Y4X4 402 aa13.05□□□□□ -0.32
HCFC1-201ENST00000310441 C15orf61A6NNL5 157 aa13.04□□□□□ -0.32
HCFC1-201ENST00000310441 PLEKHB2Q96CS7 222 aa13.04□□□□□ -0.32
HCFC1-201ENST00000310441 ADARB2-AS1A8MUL3 147 aa13.04□□□□□ -0.32
HCFC1-201ENST00000310441 PILRAQ9UKJ1 303 aa13.04□□□□□ -0.32
HCFC1-201ENST00000310441 KIAA1549Q9HCM3 1950 aa13.04□□□□□ -0.32
HCFC1-201ENST00000310441 SRP19P09132 144 aaKnown RBP13.04□□□□□ -0.32
HCFC1-201ENST00000310441 GTF3AQ92664 365 aaKnown RBP13.04□□□□□ -0.32
HCFC1-201ENST00000310441 VWC2LB2RUY7 222 aa13.04□□□□□ -0.32
HCFC1-201ENST00000310441 COX6A1P12074 109 aa13.04□□□□□ -0.32
HCFC1-201ENST00000310441 FNDC4Q9H6D8 234 aaPredicted RBP13.04□□□□□ -0.32
HCFC1-201ENST00000310441 EFEMP2O95967 443 aa13.04□□□□□ -0.32
HCFC1-201ENST00000310441 IGFBP2P18065 325 aa13.04□□□□□ -0.32
HCFC1-201ENST00000310441 A0A1W2PRE2 83 aa13.04□□□□□ -0.32
HCFC1-201ENST00000310441 ZNF479Q96JC4 524 aa13.04□□□□□ -0.32
HCFC1-201ENST00000310441 GFRA3O60609 400 aa13.04□□□□□ -0.32
HCFC1-201ENST00000310441 EGR4Q05215 589 aa13.04□□□□□ -0.32
HCFC1-201ENST00000310441 RPL39P5Q59GN2 51 aa13.04□□□□□ -0.32
HCFC1-201ENST00000310441 TCRBV4S1A1TA0A5B7 111 aa13.03□□□□□ -0.32
HCFC1-201ENST00000310441 MAJINQ3KP22 176 aa13.03□□□□□ -0.32
HCFC1-201ENST00000310441 IGKV1D-42A0A075B6H8 117 aa13.03□□□□□ -0.32
HCFC1-201ENST00000310441 OVOL1O14753 267 aa13.03□□□□□ -0.32
HCFC1-201ENST00000310441 SERF1AO75920 110 aa13.03□□□□□ -0.32
HCFC1-201ENST00000310441 ARHGAP32A7KAX9 2087 aa13.03□□□□□ -0.32
HCFC1-201ENST00000310441 PLAC1Q9HBJ0 212 aa13.03□□□□□ -0.32
HCFC1-201ENST00000310441 TRGV4A0A0C4DH28 118 aa13.03□□□□□ -0.32
HCFC1-201ENST00000310441 WISP3O95389 354 aaPredicted RBP13.03□□□□□ -0.32
HCFC1-201ENST00000310441 ITGB1BP1O14713 200 aa13.03□□□□□ -0.32
HCFC1-201ENST00000310441 CHAC1Q9BUX1 264 aa13.03□□□□□ -0.32
HCFC1-201ENST00000310441 IGKV1-8A0A0C4DH67 115 aa13.02□□□□□ -0.32
HCFC1-201ENST00000310441 YPEL1O60688 119 aa13.02□□□□□ -0.32
HCFC1-201ENST00000310441 YPEL2Q96QA6 119 aa13.02□□□□□ -0.32
HCFC1-201ENST00000310441 RNF125Q96EQ8 232 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms