RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 TGIF2LXQ8IUE1 241 aa12.25□□□□□ -0.45
SPIRE1-201ENST00000309836 NOL4LQ96MY1 436 aaPredicted RBP12.25□□□□□ -0.45
SPIRE1-201ENST00000309836 TCRBV4S1A1TA0A5B7 111 aa12.25□□□□□ -0.45
SPIRE1-201ENST00000309836 COX7A2P2O60397 106 aa12.25□□□□□ -0.45
SPIRE1-201ENST00000309836 REG1AP05451 166 aa12.25□□□□□ -0.45
SPIRE1-201ENST00000309836 PYYP10082 97 aa12.25□□□□□ -0.45
SPIRE1-201ENST00000309836 VMA21Q3ZAQ7 101 aa12.25□□□□□ -0.45
SPIRE1-201ENST00000309836 SSX8Q7RTT4 187 aa12.25□□□□□ -0.45
SPIRE1-201ENST00000309836 ASCL5Q7RTU5 278 aa12.25□□□□□ -0.45
SPIRE1-201ENST00000309836 ST6GALNAC3Q8NDV1 305 aa12.25□□□□□ -0.45
SPIRE1-201ENST00000309836 CMTM2Q8TAZ6 248 aa12.25□□□□□ -0.45
SPIRE1-201ENST00000309836 ZNF355PQ9NSJ1 428 aa12.25□□□□□ -0.45
SPIRE1-201ENST00000309836 LAMA5O15230 3695 aa12.24□□□□□ -0.45
SPIRE1-201ENST00000309836 IGHV3-72A0A0B4J1Y9 119 aa12.24□□□□□ -0.45
SPIRE1-201ENST00000309836 F2Z2F3 143 aa12.24□□□□□ -0.45
SPIRE1-201ENST00000309836 FCN1O00602 326 aa12.24□□□□□ -0.45
SPIRE1-201ENST00000309836 NBL1P41271 181 aa12.24□□□□□ -0.45
SPIRE1-201ENST00000309836 TBR1Q16650 682 aa12.24□□□□□ -0.45
SPIRE1-201ENST00000309836 IQCJQ1A5X6 159 aa12.24□□□□□ -0.45
SPIRE1-201ENST00000309836 C10orf113Q5VZT2 155 aa12.24□□□□□ -0.45
SPIRE1-201ENST00000309836 RUSC1-AS1Q66K80 236 aa12.24□□□□□ -0.45
SPIRE1-201ENST00000309836 SSUH2Q9Y2M2 353 aa12.24□□□□□ -0.45
SPIRE1-201ENST00000309836 ZFHX2Q9C0A1 2572 aaPredicted RBP12.24□□□□□ -0.45
SPIRE1-201ENST00000309836 ARFGEF3Q5TH69 2177 aa12.23□□□□□ -0.45
SPIRE1-201ENST00000309836 VSTM5A8MXK1 200 aa12.23□□□□□ -0.45
SPIRE1-201ENST00000309836 SNURFLB1AK76 121 aa12.23□□□□□ -0.45
SPIRE1-201ENST00000309836 ISLRO14498 428 aa12.23□□□□□ -0.45
SPIRE1-201ENST00000309836 SERF1AO75920 110 aa12.23□□□□□ -0.45
SPIRE1-201ENST00000309836 ESDP10768 282 aa12.23□□□□□ -0.45
SPIRE1-201ENST00000309836 CRISP2P16562 243 aa12.23□□□□□ -0.45
SPIRE1-201ENST00000309836 SUB1P53999 127 aaKnown RBP eCLIP12.23□□□□□ -0.45
SPIRE1-201ENST00000309836 ZNF329Q86UD4 541 aa12.23□□□□□ -0.45
SPIRE1-201ENST00000309836 OR1L4Q8NGR5 311 aa12.23□□□□□ -0.45
SPIRE1-201ENST00000309836 MS4A10Q96PG2 267 aa12.23□□□□□ -0.45
SPIRE1-201ENST00000309836 PAXXQ9BUH6 204 aa12.23□□□□□ -0.45
SPIRE1-201ENST00000309836 GNB1LQ9BYB4 327 aa12.23□□□□□ -0.45
SPIRE1-201ENST00000309836 ROS1P08922 2347 aa12.23□□□□□ -0.45
SPIRE1-201ENST00000309836 TRBV9A0A0B4J1U6 114 aa12.23□□□□□ -0.45
SPIRE1-201ENST00000309836 IGHV1-69-2A0A0G2JMI3 117 aa12.23□□□□□ -0.45
SPIRE1-201ENST00000309836 IGLC7A0M8Q6 106 aa12.23□□□□□ -0.45
SPIRE1-201ENST00000309836 SCGB1D1O95968 90 aa12.23□□□□□ -0.45
SPIRE1-201ENST00000309836 MGST1P10620 155 aaKnown RBP12.23□□□□□ -0.45
SPIRE1-201ENST00000309836 MFAP2P55001 183 aa12.23□□□□□ -0.45
SPIRE1-201ENST00000309836 DLX1P56177 255 aa12.23□□□□□ -0.45
SPIRE1-201ENST00000309836 TCL1AP56279 114 aa12.23□□□□□ -0.45
SPIRE1-201ENST00000309836 CX3CL1P78423 397 aa12.23□□□□□ -0.45
SPIRE1-201ENST00000309836 PVRIGQ6DKI7 326 aa12.23□□□□□ -0.45
SPIRE1-201ENST00000309836 LINC00479Q96M42 142 aa12.23□□□□□ -0.45
SPIRE1-201ENST00000309836 TMEM133Q9H2Q1 129 aa12.23□□□□□ -0.45
SPIRE1-201ENST00000309836 NAGKQ9UJ70 344 aa12.23□□□□□ -0.45
SPIRE1-201ENST00000309836 POLR3KQ9Y2Y1 108 aaPredicted RBP12.23□□□□□ -0.45
SPIRE1-201ENST00000309836 NAV3Q8IVL0 2385 aa12.23□□□□□ -0.45
SPIRE1-201ENST00000309836 C22orf46C9J442 243 aa12.22□□□□□ -0.45
SPIRE1-201ENST00000309836 ENSAO43768 121 aaKnown RBP12.22□□□□□ -0.45
SPIRE1-201ENST00000309836 SPINK4O60575 86 aa12.22□□□□□ -0.45
SPIRE1-201ENST00000309836 MC5RP33032 325 aa12.22□□□□□ -0.45
SPIRE1-201ENST00000309836 TMEM136Q6ZRR5 245 aa12.22□□□□□ -0.45
SPIRE1-201ENST00000309836 C19orf35Q6ZS72 473 aa12.22□□□□□ -0.45
SPIRE1-201ENST00000309836 Q6ZWC4 215 aa12.22□□□□□ -0.45
SPIRE1-201ENST00000309836 NHLRC2Q8NBF2 726 aa12.22□□□□□ -0.45
SPIRE1-201ENST00000309836 FXYD5Q96DB9 178 aa12.22□□□□□ -0.45
SPIRE1-201ENST00000309836 NDUFAF3Q9BU61 184 aa12.22□□□□□ -0.45
SPIRE1-201ENST00000309836 CDC42EP3Q9UKI2 254 aa12.22□□□□□ -0.45
SPIRE1-201ENST00000309836 SMIM27A0A1W2PRY6 76 aa12.21□□□□□ -0.45
SPIRE1-201ENST00000309836 CRYGCP07315 174 aa12.21□□□□□ -0.45
SPIRE1-201ENST00000309836 CRYGBP07316 175 aa12.21□□□□□ -0.45
SPIRE1-201ENST00000309836 SNRPCP09234 159 aaKnown RBP12.21□□□□□ -0.45
SPIRE1-201ENST00000309836 CNTFRP26992 372 aa12.21□□□□□ -0.45
SPIRE1-201ENST00000309836 TAS2R60P59551 318 aa12.21□□□□□ -0.45
SPIRE1-201ENST00000309836 PRB3Q04118 309 aaPredicted RBP12.21□□□□□ -0.45
SPIRE1-201ENST00000309836 Q0VG73 95 aa12.21□□□□□ -0.45
SPIRE1-201ENST00000309836 ASPHD1Q5U4P2 390 aa12.21□□□□□ -0.45
SPIRE1-201ENST00000309836 SPACA3Q8IXA5 215 aa12.21□□□□□ -0.45
SPIRE1-201ENST00000309836 BSNQ9UPA5 3926 aa12.21□□□□□ -0.46
SPIRE1-201ENST00000309836 RIF1Q5UIP0 2472 aaKnown RBP12.21□□□□□ -0.46
SPIRE1-201ENST00000309836 PLAUP00749 431 aa12.21□□□□□ -0.46
SPIRE1-201ENST00000309836 LGALS7P47929 136 aa12.21□□□□□ -0.46
SPIRE1-201ENST00000309836 TPPP2P59282 170 aa12.21□□□□□ -0.46
SPIRE1-201ENST00000309836 BPIFB3P59826 476 aa12.21□□□□□ -0.46
SPIRE1-201ENST00000309836 SLC35B1P78383 322 aa12.21□□□□□ -0.46
SPIRE1-201ENST00000309836 IBA57Q5T440 356 aaKnown RBP12.21□□□□□ -0.46
SPIRE1-201ENST00000309836 HCP5Q6MZN7 132 aa12.21□□□□□ -0.46
SPIRE1-201ENST00000309836 NGBQ9NPG2 151 aa12.21□□□□□ -0.46
SPIRE1-201ENST00000309836 SMG1Q96Q15 3661 aaKnown RBP12.2□□□□□ -0.46
SPIRE1-201ENST00000309836 A0A1B0GV90 55 aa12.2□□□□□ -0.46
SPIRE1-201ENST00000309836 LYNX1G3V0Z9 82 aa12.2□□□□□ -0.46
SPIRE1-201ENST00000309836 PEX7O00628 323 aa12.2□□□□□ -0.46
SPIRE1-201ENST00000309836 MOSP00540 346 aa12.2□□□□□ -0.46
SPIRE1-201ENST00000309836 LYNX1P0DP58 116 aa12.2□□□□□ -0.46
SPIRE1-201ENST00000309836 APOBEC3AP31941 199 aaPredicted RBP12.2□□□□□ -0.46
SPIRE1-201ENST00000309836 TEX45Q8NA69 505 aa12.2□□□□□ -0.46
SPIRE1-201ENST00000309836 GNB4Q9HAV0 340 aa12.2□□□□□ -0.46
SPIRE1-201ENST00000309836 AMMECR1Q9Y4X0 333 aaPredicted RBP12.2□□□□□ -0.46
SPIRE1-201ENST00000309836 IGHV2-26A0A0B4J1V2 119 aa12.19□□□□□ -0.46
SPIRE1-201ENST00000309836 TRAV34A0A0B4J273 112 aa12.19□□□□□ -0.46
SPIRE1-201ENST00000309836 CD33P20138 364 aa12.19□□□□□ -0.46
SPIRE1-201ENST00000309836 MYCNOSP40205 109 aa12.19□□□□□ -0.46
SPIRE1-201ENST00000309836 PAFAH1B2P68402 229 aa12.19□□□□□ -0.46
SPIRE1-201ENST00000309836 WDR73Q6P4I2 378 aa12.19□□□□□ -0.46
SPIRE1-201ENST00000309836 BEND2Q8NDZ0 799 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms