RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 IGHV4-30-2A0A087WSY4 118 aa16.91■□□□□ 0.3
ATG4D-201ENST00000309469 A0A087WWC5 75 aa16.91■□□□□ 0.3
ATG4D-201ENST00000309469 TMEM250H0YL14 139 aa16.91■□□□□ 0.3
ATG4D-201ENST00000309469 SAA4P35542 130 aa16.91■□□□□ 0.3
ATG4D-201ENST00000309469 RND2P52198 227 aa16.91■□□□□ 0.3
ATG4D-201ENST00000309469 FXYD3Q14802 87 aa16.91■□□□□ 0.3
ATG4D-201ENST00000309469 HIST1H2BAQ96A08 127 aa16.91■□□□□ 0.3
ATG4D-201ENST00000309469 FUT9Q9Y231 359 aa16.91■□□□□ 0.3
ATG4D-201ENST00000309469 TCRBV4S1A1TA0A5B7 111 aa16.9■□□□□ 0.3
ATG4D-201ENST00000309469 MT-CO2P00403 227 aa16.9■□□□□ 0.3
ATG4D-201ENST00000309469 CRYBA1P05813 215 aa16.9■□□□□ 0.3
ATG4D-201ENST00000309469 PNRC1Q12796 327 aaPredicted RBP16.9■□□□□ 0.3
ATG4D-201ENST00000309469 MIR17HGQ75NE6 70 aa16.9■□□□□ 0.3
ATG4D-201ENST00000309469 NRGNQ92686 78 aa16.9■□□□□ 0.3
ATG4D-201ENST00000309469 DMRT1Q9Y5R6 373 aa16.9■□□□□ 0.3
ATG4D-201ENST00000309469 A1L4Q6 167 aa16.9■□□□□ 0.3
ATG4D-201ENST00000309469 NCBP2LA6PVI3 153 aaKnown RBP16.9■□□□□ 0.3
ATG4D-201ENST00000309469 OR2C1O95371 312 aa16.9■□□□□ 0.3
ATG4D-201ENST00000309469 MT-ND4LP03901 98 aa16.9■□□□□ 0.3
ATG4D-201ENST00000309469 TMEM11P17152 192 aa16.9■□□□□ 0.3
ATG4D-201ENST00000309469 AKAP6Q13023 2319 aa16.89■□□□□ 0.29
ATG4D-201ENST00000309469 CENPVL3A0A0U1RRI6 287 aa16.89■□□□□ 0.29
ATG4D-201ENST00000309469 ZNF727A8MUV8 499 aa16.89■□□□□ 0.29
ATG4D-201ENST00000309469 B4DEV8 164 aa16.89■□□□□ 0.29
ATG4D-201ENST00000309469 C11orf94C9JXX5 98 aa16.89■□□□□ 0.29
ATG4D-201ENST00000309469 NPFFO15130 113 aa16.89■□□□□ 0.29
ATG4D-201ENST00000309469 FAM106CPP0CH98 169 aa16.89■□□□□ 0.29
ATG4D-201ENST00000309469 GCHFRP30047 84 aa16.89■□□□□ 0.29
ATG4D-201ENST00000309469 UBE2G2P60604 165 aa16.89■□□□□ 0.29
ATG4D-201ENST00000309469 RUSC1-AS1Q66K80 236 aa16.89■□□□□ 0.29
ATG4D-201ENST00000309469 WNT10AQ9GZT5 417 aa16.89■□□□□ 0.29
ATG4D-201ENST00000309469 MYO18BQ8IUG5 2567 aa16.88■□□□□ 0.29
ATG4D-201ENST00000309469 OR5G3P0C626 314 aa16.88■□□□□ 0.29
ATG4D-201ENST00000309469 FOLR2P14207 255 aa16.88■□□□□ 0.29
ATG4D-201ENST00000309469 PAX1P15863 534 aa16.88■□□□□ 0.29
ATG4D-201ENST00000309469 ZNF90Q03938 601 aa16.88■□□□□ 0.29
ATG4D-201ENST00000309469 ZNF562Q6V9R5 426 aa16.88■□□□□ 0.29
ATG4D-201ENST00000309469 C22orf15Q8WYQ4 148 aa16.88■□□□□ 0.29
ATG4D-201ENST00000309469 BRS3P32247 399 aa16.88■□□□□ 0.29
ATG4D-201ENST00000309469 SELENOTP62341 195 aa16.88■□□□□ 0.29
ATG4D-201ENST00000309469 FAM120AOSQ5T036 256 aa16.88■□□□□ 0.29
ATG4D-201ENST00000309469 CST9LP1Q5W188 147 aa16.88■□□□□ 0.29
ATG4D-201ENST00000309469 PIP4P2Q8N4L2 257 aa16.88■□□□□ 0.29
ATG4D-201ENST00000309469 TMEM116Q8NCL8 245 aa16.88■□□□□ 0.29
ATG4D-201ENST00000309469 TMEM37Q8WXS4 190 aa16.88■□□□□ 0.29
ATG4D-201ENST00000309469 SMIM7Q9BQ49 75 aa16.88■□□□□ 0.29
ATG4D-201ENST00000309469 SDF2L1Q9HCN8 221 aa16.88■□□□□ 0.29
ATG4D-201ENST00000309469 TECRQ9NZ01 308 aaKnown RBP16.88■□□□□ 0.29
ATG4D-201ENST00000309469 UBR5O95071 2799 aaPredicted RBP16.87■□□□□ 0.29
ATG4D-201ENST00000309469 PSMB11A5LHX3 300 aa16.87■□□□□ 0.29
ATG4D-201ENST00000309469 CX3CL1P78423 397 aa16.87■□□□□ 0.29
ATG4D-201ENST00000309469 FAM24BQ8N5W8 94 aa16.87■□□□□ 0.29
ATG4D-201ENST00000309469 FAM103A1Q9BTL3 118 aaKnown RBP16.87■□□□□ 0.29
ATG4D-201ENST00000309469 DNAJC4Q9NNZ3 241 aa16.87■□□□□ 0.29
ATG4D-201ENST00000309469 IGHV3-21A0A0B4J1V1 117 aa16.86■□□□□ 0.29
ATG4D-201ENST00000309469 ATP5G3P48201 142 aa16.86■□□□□ 0.29
ATG4D-201ENST00000309469 DSCR9P59020 149 aa16.86■□□□□ 0.29
ATG4D-201ENST00000309469 RNF212Q495C1 297 aa16.86■□□□□ 0.29
ATG4D-201ENST00000309469 RPUSD4Q96CM3 377 aaKnown RBP16.86■□□□□ 0.29
ATG4D-201ENST00000309469 TNFRSF19Q9NS68 423 aa16.86■□□□□ 0.29
ATG4D-201ENST00000309469 PLXNB1O43157 2135 aa16.86■□□□□ 0.29
ATG4D-201ENST00000309469 PDE6DO43924 150 aa16.86■□□□□ 0.29
ATG4D-201ENST00000309469 CLN5O75503 358 aa16.86■□□□□ 0.29
ATG4D-201ENST00000309469 ZNF674Q2M3X9 581 aa16.86■□□□□ 0.29
ATG4D-201ENST00000309469 RNF2Q99496 336 aa16.86■□□□□ 0.29
ATG4D-201ENST00000309469 TRGV9Q99603 122 aa16.86■□□□□ 0.29
ATG4D-201ENST00000309469 TXNDC17Q9BRA2 123 aa16.86■□□□□ 0.29
ATG4D-201ENST00000309469 NAT8Q9UHE5 227 aa16.86■□□□□ 0.29
ATG4D-201ENST00000309469 I3L2K1 104 aa16.85■□□□□ 0.29
ATG4D-201ENST00000309469 OR1L6Q8NGR2 347 aa16.85■□□□□ 0.29
ATG4D-201ENST00000309469 ARPC1AQ92747 370 aa16.85■□□□□ 0.29
ATG4D-201ENST00000309469 MRPL32Q9BYC8 188 aaKnown RBP16.85■□□□□ 0.29
ATG4D-201ENST00000309469 PARLQ9H300 379 aa16.85■□□□□ 0.29
ATG4D-201ENST00000309469 C1RLQ9NZP8 487 aa16.85■□□□□ 0.29
ATG4D-201ENST00000309469 NAV3Q8IVL0 2385 aa16.85■□□□□ 0.29
ATG4D-201ENST00000309469 TAS2R45P59539 299 aa16.84■□□□□ 0.29
ATG4D-201ENST00000309469 OR1L4Q8NGR5 311 aa16.84■□□□□ 0.29
ATG4D-201ENST00000309469 OR4X1Q8NH49 305 aa16.84■□□□□ 0.29
ATG4D-201ENST00000309469 YPEL4Q96NS1 127 aa16.84■□□□□ 0.29
ATG4D-201ENST00000309469 ASH1LQ9NR48 2969 aaKnown RBP16.84■□□□□ 0.29
ATG4D-201ENST00000309469 CXorf65A6NEN9 183 aa16.84■□□□□ 0.29
ATG4D-201ENST00000309469 COX7A2P2O60397 106 aa16.84■□□□□ 0.29
ATG4D-201ENST00000309469 C8orf88P0DMB2 117 aa16.84■□□□□ 0.29
ATG4D-201ENST00000309469 RAB5AP20339 215 aa16.84■□□□□ 0.29
ATG4D-201ENST00000309469 NPPCP23582 126 aa16.84■□□□□ 0.29
ATG4D-201ENST00000309469 KIAA0141Q14154 515 aaPredicted RBP16.84■□□□□ 0.29
ATG4D-201ENST00000309469 TMEM241Q24JQ0 296 aa16.84■□□□□ 0.29
ATG4D-201ENST00000309469 PFDN5Q99471 154 aa16.84■□□□□ 0.29
ATG4D-201ENST00000309469 YTHDF2Q9Y5A9 579 aaKnown RBP16.84■□□□□ 0.29
ATG4D-201ENST00000309469 F6UZH7 168 aa16.83■□□□□ 0.28
ATG4D-201ENST00000309469 PATE2Q6UY27 113 aa16.83■□□□□ 0.28
ATG4D-201ENST00000309469 PQLC2Q6ZP29 291 aa16.83■□□□□ 0.28
ATG4D-201ENST00000309469 Q8N9W7 124 aa16.83■□□□□ 0.28
ATG4D-201ENST00000309469 ZNF503Q96F45 646 aa16.83■□□□□ 0.28
ATG4D-201ENST00000309469 DOK5Q9P104 306 aa16.83■□□□□ 0.28
ATG4D-201ENST00000309469 IGHV1-69DA0A0B4J2H0 117 aa16.82■□□□□ 0.28
ATG4D-201ENST00000309469 IGHV1-69P01742 117 aa16.82■□□□□ 0.28
ATG4D-201ENST00000309469 NDPQ00604 133 aa16.82■□□□□ 0.28
ATG4D-201ENST00000309469 ASPHD1Q5U4P2 390 aa16.82■□□□□ 0.28
ATG4D-201ENST00000309469 C10orf113Q5VZT2 155 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms