RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 CXorf65A6NEN9 183 aa17.93■□□□□ 0.46
PDLIM2-202ENST00000308354 INS-IGF2F8WCM5 200 aa17.93■□□□□ 0.46
PDLIM2-202ENST00000308354 FOXH1O75593 365 aa17.93■□□□□ 0.46
PDLIM2-202ENST00000308354 CXCL1P09341 107 aa17.93■□□□□ 0.46
PDLIM2-202ENST00000308354 COX6B1P14854 86 aa17.93■□□□□ 0.46
PDLIM2-202ENST00000308354 SSBP2P81877 361 aaPredicted RBP17.93■□□□□ 0.46
PDLIM2-202ENST00000308354 CD69Q07108 199 aa17.93■□□□□ 0.46
PDLIM2-202ENST00000308354 CLEC2AQ6UVW9 174 aa17.93■□□□□ 0.46
PDLIM2-202ENST00000308354 SLC45A2Q9UMX9 530 aa17.93■□□□□ 0.46
PDLIM2-202ENST00000308354 CXorf1O96002 111 aa17.92■□□□□ 0.46
PDLIM2-202ENST00000308354 NPPCP23582 126 aa17.92■□□□□ 0.46
PDLIM2-202ENST00000308354 COL8A1P27658 744 aa17.92■□□□□ 0.46
PDLIM2-202ENST00000308354 RHOBP62745 196 aa17.92■□□□□ 0.46
PDLIM2-202ENST00000308354 KIAA0141Q14154 515 aaPredicted RBP17.92■□□□□ 0.46
PDLIM2-202ENST00000308354 MALSU1Q96EH3 234 aa17.92■□□□□ 0.46
PDLIM2-202ENST00000308354 EAF1Q96JC9 268 aaPredicted RBP17.92■□□□□ 0.46
PDLIM2-202ENST00000308354 POLQO75417 2590 aa17.92■□□□□ 0.46
PDLIM2-202ENST00000308354 GATA2P23769 480 aaPredicted RBP17.92■□□□□ 0.46
PDLIM2-202ENST00000308354 ACY3Q96HD9 319 aa17.92■□□□□ 0.46
PDLIM2-202ENST00000308354 SSX3Q99909 188 aa17.92■□□□□ 0.46
PDLIM2-202ENST00000308354 FNDC4Q9H6D8 234 aaPredicted RBP17.92■□□□□ 0.46
PDLIM2-202ENST00000308354 CHD6Q8TD26 2715 aa17.92■□□□□ 0.46
PDLIM2-202ENST00000308354 TGIF2-C20orf24A0A0A6YYL0 155 aa17.91■□□□□ 0.46
PDLIM2-202ENST00000308354 MOSP00540 346 aa17.91■□□□□ 0.46
PDLIM2-202ENST00000308354 OR10J1P30954 320 aa17.91■□□□□ 0.46
PDLIM2-202ENST00000308354 SLC16A13Q7RTY0 426 aa17.91■□□□□ 0.46
PDLIM2-202ENST00000308354 RNF5Q99942 180 aa17.91■□□□□ 0.46
PDLIM2-202ENST00000308354 NDUFS6O75380 124 aaKnown RBP17.9■□□□□ 0.46
PDLIM2-202ENST00000308354 RPS10P46783 165 aaKnown RBP17.9■□□□□ 0.46
PDLIM2-202ENST00000308354 RPL23P62829 140 aaKnown RBP17.9■□□□□ 0.46
PDLIM2-202ENST00000308354 SRSF12Q8WXF0 261 aaKnown RBP17.9■□□□□ 0.46
PDLIM2-202ENST00000308354 TMEM242Q9NWH2 141 aa17.9■□□□□ 0.46
PDLIM2-202ENST00000308354 NBR2O15453 112 aa17.9■□□□□ 0.46
PDLIM2-202ENST00000308354 SUB1P53999 127 aaKnown RBP eCLIP17.9■□□□□ 0.46
PDLIM2-202ENST00000308354 MFAP2P55001 183 aa17.9■□□□□ 0.46
PDLIM2-202ENST00000308354 VWC2LB2RUY7 222 aa17.89■□□□□ 0.45
PDLIM2-202ENST00000308354 TEX22C9J3V5 150 aa17.89■□□□□ 0.45
PDLIM2-202ENST00000308354 CLDN34H7C241 214 aa17.89■□□□□ 0.45
PDLIM2-202ENST00000308354 PDE6DO43924 150 aa17.89■□□□□ 0.45
PDLIM2-202ENST00000308354 GCHFRP30047 84 aa17.89■□□□□ 0.45
PDLIM2-202ENST00000308354 UBE2E1P51965 193 aa17.89■□□□□ 0.45
PDLIM2-202ENST00000308354 FAM78BQ5VT40 261 aa17.89■□□□□ 0.45
PDLIM2-202ENST00000308354 CNIH1O95406 144 aa17.88■□□□□ 0.45
PDLIM2-202ENST00000308354 SNRPEP62304 92 aaKnown RBP17.88■□□□□ 0.45
PDLIM2-202ENST00000308354 MINOS1Q5TGZ0 78 aa17.88■□□□□ 0.45
PDLIM2-202ENST00000308354 CCDC144NLQ6NUI1 221 aa17.88■□□□□ 0.45
PDLIM2-202ENST00000308354 MIR17HGQ75NE6 70 aa17.88■□□□□ 0.45
PDLIM2-202ENST00000308354 CACNG8Q8WXS5 425 aa17.88■□□□□ 0.45
PDLIM2-202ENST00000308354 MISP3Q96FF7 219 aa17.88■□□□□ 0.45
PDLIM2-202ENST00000308354 MRPL36Q9P0J6 103 aaKnown RBP17.88■□□□□ 0.45
PDLIM2-202ENST00000308354 MINOS1-NBL1R4GNA1 71 aa17.88■□□□□ 0.45
PDLIM2-202ENST00000308354 IGHV3OR16-10A0A075B7F0 116 aa17.88■□□□□ 0.45
PDLIM2-202ENST00000308354 IGHV3-21A0A0B4J1V1 117 aa17.88■□□□□ 0.45
PDLIM2-202ENST00000308354 SAA4P35542 130 aa17.88■□□□□ 0.45
PDLIM2-202ENST00000308354 RUSC1-AS1Q66K80 236 aa17.88■□□□□ 0.45
PDLIM2-202ENST00000308354 SLC35E1Q96K37 410 aa17.88■□□□□ 0.45
PDLIM2-202ENST00000308354 FAM103A1Q9BTL3 118 aaKnown RBP17.88■□□□□ 0.45
PDLIM2-202ENST00000308354 DERL1Q9BUN8 251 aa17.88■□□□□ 0.45
PDLIM2-202ENST00000308354 NDUFS8O00217 210 aa17.87■□□□□ 0.45
PDLIM2-202ENST00000308354 GPX4P36969 197 aaPredicted RBP17.87■□□□□ 0.45
PDLIM2-202ENST00000308354 AKR1D1P51857 326 aa17.87■□□□□ 0.45
PDLIM2-202ENST00000308354 RND2P52198 227 aa17.87■□□□□ 0.45
PDLIM2-202ENST00000308354 OR2T10Q8NGZ9 312 aa17.87■□□□□ 0.45
PDLIM2-202ENST00000308354 NANPQ8TBE9 248 aa17.87■□□□□ 0.45
PDLIM2-202ENST00000308354 AJUBAQ96IF1 538 aa17.87■□□□□ 0.45
PDLIM2-202ENST00000308354 YTHDF2Q9Y5A9 579 aaKnown RBP17.87■□□□□ 0.45
PDLIM2-202ENST00000308354 NCBP2LA6PVI3 153 aaKnown RBP17.87■□□□□ 0.45
PDLIM2-202ENST00000308354 NDUFB4O95168 129 aa17.87■□□□□ 0.45
PDLIM2-202ENST00000308354 RPL35P42766 123 aaKnown RBP17.87■□□□□ 0.45
PDLIM2-202ENST00000308354 PIP4P2Q8N4L2 257 aa17.87■□□□□ 0.45
PDLIM2-202ENST00000308354 RNASEH2CQ8TDP1 164 aaKnown RBP17.87■□□□□ 0.45
PDLIM2-202ENST00000308354 ZFHX3Q15911 3703 aa17.86■□□□□ 0.45
PDLIM2-202ENST00000308354 S100A6P06703 90 aa17.86■□□□□ 0.45
PDLIM2-202ENST00000308354 FAM120AOSQ5T036 256 aa17.86■□□□□ 0.45
PDLIM2-202ENST00000308354 NPIPB3Q92617 1050 aa17.86■□□□□ 0.45
PDLIM2-202ENST00000308354 FUT9Q9Y231 359 aa17.86■□□□□ 0.45
PDLIM2-202ENST00000308354 USP9YO00507 2555 aaPredicted RBP17.86■□□□□ 0.45
PDLIM2-202ENST00000308354 C16orf82Q7Z2V1 217 aa17.86■□□□□ 0.45
PDLIM2-202ENST00000308354 C1QL4Q86Z23 238 aa17.86■□□□□ 0.45
PDLIM2-202ENST00000308354 NPBQ8NG41 125 aa17.86■□□□□ 0.45
PDLIM2-202ENST00000308354 CTDSP1Q9GZU7 261 aa17.86■□□□□ 0.45
PDLIM2-202ENST00000308354 NDUFA3O95167 84 aa17.85■□□□□ 0.45
PDLIM2-202ENST00000308354 ABCA1O95477 2261 aa17.85■□□□□ 0.45
PDLIM2-202ENST00000308354 PTPN13Q12923 2485 aa17.84■□□□□ 0.45
PDLIM2-202ENST00000308354 CENPVL3A0A0U1RRI6 287 aa17.84■□□□□ 0.45
PDLIM2-202ENST00000308354 F6UZH7 168 aa17.84■□□□□ 0.45
PDLIM2-202ENST00000308354 POLR3KQ9Y2Y1 108 aaPredicted RBP17.84■□□□□ 0.45
PDLIM2-202ENST00000308354 TBL2Q9Y4P3 447 aaKnown RBP17.84■□□□□ 0.45
PDLIM2-202ENST00000308354 DMRT1Q9Y5R6 373 aa17.84■□□□□ 0.45
PDLIM2-202ENST00000308354 OOSP1A8MZH6 123 aa17.84■□□□□ 0.45
PDLIM2-202ENST00000308354 C5orf64Q2M2E5 130 aa17.84■□□□□ 0.45
PDLIM2-202ENST00000308354 MRPL41Q8IXM3 137 aaKnown RBP17.84■□□□□ 0.45
PDLIM2-202ENST00000308354 OR5T1Q8NG75 326 aa17.84■□□□□ 0.45
PDLIM2-202ENST00000308354 SLC25A33Q9BSK2 321 aa17.84■□□□□ 0.45
PDLIM2-202ENST00000308354 SCO2A0A1W2PP80 73 aa17.83■□□□□ 0.45
PDLIM2-202ENST00000308354 C5orf52A6NGY3 159 aa17.83■□□□□ 0.45
PDLIM2-202ENST00000308354 MT-CO2P00403 227 aa17.83■□□□□ 0.45
PDLIM2-202ENST00000308354 KRTAP10-9P60411 292 aa17.83■□□□□ 0.45
PDLIM2-202ENST00000308354 PAX8Q06710 450 aa17.83■□□□□ 0.45
PDLIM2-202ENST00000308354 FXYD3Q14802 87 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms