RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 ZFYVE26Q68DK2 2539 aa13.32□□□□□ -0.28
CCDC8-201ENST00000307522 TIGITQ495A1 244 aa13.32□□□□□ -0.28
CCDC8-201ENST00000307522 WDR73Q6P4I2 378 aa13.32□□□□□ -0.28
CCDC8-201ENST00000307522 Q6ZS49 121 aa13.32□□□□□ -0.28
CCDC8-201ENST00000307522 ASCL5Q7RTU5 278 aa13.32□□□□□ -0.28
CCDC8-201ENST00000307522 C5orf17Q8NAS9 161 aa13.32□□□□□ -0.28
CCDC8-201ENST00000307522 TMEM70Q9BUB7 260 aa13.32□□□□□ -0.28
CCDC8-201ENST00000307522 NBEAP1P0C6P0 100 aa13.32□□□□□ -0.28
CCDC8-201ENST00000307522 LINC00869P0C866 280 aa13.32□□□□□ -0.28
CCDC8-201ENST00000307522 TMEM186Q96B77 213 aa13.32□□□□□ -0.28
CCDC8-201ENST00000307522 OR2H2O95918 312 aa13.31□□□□□ -0.28
CCDC8-201ENST00000307522 IGHV1-2P23083 117 aa13.31□□□□□ -0.28
CCDC8-201ENST00000307522 TEX45Q8NA69 505 aa13.31□□□□□ -0.28
CCDC8-201ENST00000307522 DCTN5Q9BTE1 182 aa13.31□□□□□ -0.28
CCDC8-201ENST00000307522 HES4Q9HCC6 221 aa13.31□□□□□ -0.28
CCDC8-201ENST00000307522 DCHS2Q6V1P9 2916 aa13.31□□□□□ -0.28
CCDC8-201ENST00000307522 OR4A5Q8NH83 315 aa13.31□□□□□ -0.28
CCDC8-201ENST00000307522 HSD17B10Q99714 261 aaKnown RBP13.31□□□□□ -0.28
CCDC8-201ENST00000307522 AESQ08117 197 aa13.3□□□□□ -0.28
CCDC8-201ENST00000307522 HLA-DQA1P01909 254 aa13.3□□□□□ -0.28
CCDC8-201ENST00000307522 IGLC1P0CG04 106 aa13.3□□□□□ -0.28
CCDC8-201ENST00000307522 MEF2CQ06413 473 aaPredicted RBP13.3□□□□□ -0.28
CCDC8-201ENST00000307522 CEACAM21Q3KPI0 293 aa13.3□□□□□ -0.28
CCDC8-201ENST00000307522 SAMD13Q5VXD3 122 aa13.3□□□□□ -0.28
CCDC8-201ENST00000307522 NPVFQ9HCQ7 196 aa13.3□□□□□ -0.28
CCDC8-201ENST00000307522 DUSP13Q9UII6 198 aa13.3□□□□□ -0.28
CCDC8-201ENST00000307522 PSG11Q9UQ72 335 aa13.3□□□□□ -0.28
CCDC8-201ENST00000307522 SAA2-SAA4A0A096LPE2 208 aa13.3□□□□□ -0.28
CCDC8-201ENST00000307522 CDIPTO14735 213 aa13.3□□□□□ -0.28
CCDC8-201ENST00000307522 DNPH1O43598 174 aa13.3□□□□□ -0.28
CCDC8-201ENST00000307522 RAC2P15153 192 aa13.3□□□□□ -0.28
CCDC8-201ENST00000307522 IGFBP2P18065 325 aa13.3□□□□□ -0.28
CCDC8-201ENST00000307522 RHOBP62745 196 aa13.3□□□□□ -0.28
CCDC8-201ENST00000307522 TBR1Q16650 682 aa13.3□□□□□ -0.28
CCDC8-201ENST00000307522 POM121L2Q96KW2 1035 aa13.3□□□□□ -0.28
CCDC8-201ENST00000307522 PLEKHA3Q9HB20 300 aa13.3□□□□□ -0.28
CCDC8-201ENST00000307522 FCGR3BO75015 233 aa13.29□□□□□ -0.28
CCDC8-201ENST00000307522 MT-ND6P03923 174 aa13.29□□□□□ -0.28
CCDC8-201ENST00000307522 Q6ZR03 302 aa13.29□□□□□ -0.28
CCDC8-201ENST00000307522 URB1-AS1Q96HZ7 61 aa13.29□□□□□ -0.28
CCDC8-201ENST00000307522 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.29□□□□□ -0.28
CCDC8-201ENST00000307522 WNT9BO14905 357 aa13.29□□□□□ -0.28
CCDC8-201ENST00000307522 HAND1O96004 215 aa13.29□□□□□ -0.28
CCDC8-201ENST00000307522 LGALS7P47929 136 aa13.29□□□□□ -0.28
CCDC8-201ENST00000307522 PAX2Q02962 417 aa13.29□□□□□ -0.28
CCDC8-201ENST00000307522 NINJ1Q92982 152 aa13.29□□□□□ -0.28
CCDC8-201ENST00000307522 AP1S3Q96PC3 154 aa13.29□□□□□ -0.28
CCDC8-201ENST00000307522 MRPL27Q9P0M9 148 aaKnown RBP13.29□□□□□ -0.28
CCDC8-201ENST00000307522 TANC2Q9HCD6 1990 aa13.28□□□□□ -0.28
CCDC8-201ENST00000307522 K7EMI3 77 aa13.28□□□□□ -0.28
CCDC8-201ENST00000307522 FAM71F2Q6NXP2 309 aa13.28□□□□□ -0.28
CCDC8-201ENST00000307522 TCF24Q7RTU0 167 aa13.28□□□□□ -0.28
CCDC8-201ENST00000307522 IGKV3D-15A0A087WSY6 115 aa13.28□□□□□ -0.28
CCDC8-201ENST00000307522 GGTLC3B5MD39 225 aa13.28□□□□□ -0.28
CCDC8-201ENST00000307522 MPV17P39210 176 aa13.28□□□□□ -0.28
CCDC8-201ENST00000307522 PRAMEF5Q5TYX0 476 aa13.28□□□□□ -0.28
CCDC8-201ENST00000307522 PRAMEF6Q5VXH4 476 aa13.28□□□□□ -0.28
CCDC8-201ENST00000307522 PERPQ96FX8 193 aa13.28□□□□□ -0.28
CCDC8-201ENST00000307522 TRBV9A0A0B4J1U6 114 aa13.28□□□□□ -0.28
CCDC8-201ENST00000307522 MLANAQ16655 118 aa13.28□□□□□ -0.28
CCDC8-201ENST00000307522 SCCPDHQ8NBX0 429 aa13.28□□□□□ -0.28
CCDC8-201ENST00000307522 SLC25A40Q8TBP6 338 aa13.28□□□□□ -0.28
CCDC8-201ENST00000307522 SPSB4Q96A44 273 aa13.28□□□□□ -0.28
CCDC8-201ENST00000307522 C1QTNF5Q9BXJ0 243 aa13.28□□□□□ -0.28
CCDC8-201ENST00000307522 OBP2BQ9NPH6 170 aa13.28□□□□□ -0.28
CCDC8-201ENST00000307522 PLXNB1O43157 2135 aa13.27□□□□□ -0.28
CCDC8-201ENST00000307522 FAM90A26D6RGX4 464 aa13.27□□□□□ -0.28
CCDC8-201ENST00000307522 IGHV3-48P01763 117 aa13.27□□□□□ -0.28
CCDC8-201ENST00000307522 PRSS57Q6UWY2 283 aa13.27□□□□□ -0.28
CCDC8-201ENST00000307522 C1orf159Q96HA4 380 aa13.27□□□□□ -0.28
CCDC8-201ENST00000307522 TRGV10A0A0A0MS01 117 aa13.27□□□□□ -0.29
CCDC8-201ENST00000307522 TRAV5A0A0B4J249 113 aa13.27□□□□□ -0.29
CCDC8-201ENST00000307522 SPG11Q96JI7 2443 aa13.27□□□□□ -0.29
CCDC8-201ENST00000307522 PSPNO60542 156 aa13.26□□□□□ -0.29
CCDC8-201ENST00000307522 FXYD7P58549 80 aa13.26□□□□□ -0.29
CCDC8-201ENST00000307522 NHLH1Q02575 133 aa13.26□□□□□ -0.29
CCDC8-201ENST00000307522 NUP35Q8NFH5 326 aa13.26□□□□□ -0.29
CCDC8-201ENST00000307522 PEF1Q9UBV8 284 aaKnown RBP13.26□□□□□ -0.29
CCDC8-201ENST00000307522 VWC2LB2RUY7 222 aa13.26□□□□□ -0.29
CCDC8-201ENST00000307522 SYS1-DBNDD2H3BUS1 97 aa13.26□□□□□ -0.29
CCDC8-201ENST00000307522 MTURNQ8N3F0 131 aa13.26□□□□□ -0.29
CCDC8-201ENST00000307522 IGHV1-24A0A0C4DH33 117 aa13.26□□□□□ -0.29
CCDC8-201ENST00000307522 ANKRD30BLA7E2S9 258 aa13.26□□□□□ -0.29
CCDC8-201ENST00000307522 C12orf77C9JDV5 145 aa13.26□□□□□ -0.29
CCDC8-201ENST00000307522 LEPROTL1O95214 131 aa13.26□□□□□ -0.29
CCDC8-201ENST00000307522 AZU1P20160 251 aa13.26□□□□□ -0.29
CCDC8-201ENST00000307522 GPR183P32249 361 aa13.26□□□□□ -0.29
CCDC8-201ENST00000307522 FAM214BQ7L5A3 538 aa13.26□□□□□ -0.29
CCDC8-201ENST00000307522 NAV3Q8IVL0 2385 aa13.25□□□□□ -0.29
CCDC8-201ENST00000307522 G3V4G9 280 aa13.25□□□□□ -0.29
CCDC8-201ENST00000307522 HTR1DP28221 377 aa13.25□□□□□ -0.29
CCDC8-201ENST00000307522 OPRK1P41145 380 aa13.25□□□□□ -0.29
CCDC8-201ENST00000307522 C12orf54Q6X4T0 127 aa13.25□□□□□ -0.29
CCDC8-201ENST00000307522 HIGD1CA8MV81 97 aa13.25□□□□□ -0.29
CCDC8-201ENST00000307522 PLAUP00749 431 aa13.25□□□□□ -0.29
CCDC8-201ENST00000307522 IGLV2-8P01709 118 aa13.25□□□□□ -0.29
CCDC8-201ENST00000307522 KIR2DL2P43627 348 aaPredicted RBP13.25□□□□□ -0.29
CCDC8-201ENST00000307522 PRR30Q53SZ7 412 aaPredicted RBP13.25□□□□□ -0.29
CCDC8-201ENST00000307522 ACP7Q6ZNF0 438 aa13.25□□□□□ -0.29
CCDC8-201ENST00000307522 ZNF645Q8N7E2 425 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms