RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 ZBTB8BQ8NAP8 495 aaPredicted RBP8.41□□□□□ -1.06
CSPG4P1Y-201ENST00000306641 OR4D5Q8NGN0 318 aa8.41□□□□□ -1.06
CSPG4P1Y-201ENST00000306641 MAGT1Q9H0U3 335 aa8.41□□□□□ -1.06
CSPG4P1Y-201ENST00000306641 GSKIPQ9P0R6 139 aa8.41□□□□□ -1.06
CSPG4P1Y-201ENST00000306641 NOTCH3Q9UM47 2321 aa8.4□□□□□ -1.06
CSPG4P1Y-201ENST00000306641 IGHV3-35A0A0C4DH35 117 aa8.4□□□□□ -1.06
CSPG4P1Y-201ENST00000306641 NDUFA4O00483 81 aa8.4□□□□□ -1.06
CSPG4P1Y-201ENST00000306641 WIPF1O43516 503 aa8.4□□□□□ -1.06
CSPG4P1Y-201ENST00000306641 PTTG1O95997 202 aa8.4□□□□□ -1.06
CSPG4P1Y-201ENST00000306641 SLC25A4P12235 298 aa8.4□□□□□ -1.06
CSPG4P1Y-201ENST00000306641 EGFEM1PQ0D2K5 195 aa8.4□□□□□ -1.06
CSPG4P1Y-201ENST00000306641 PVRIGQ6DKI7 326 aa8.4□□□□□ -1.06
CSPG4P1Y-201ENST00000306641 C11orf87Q6NUJ2 197 aa8.4□□□□□ -1.06
CSPG4P1Y-201ENST00000306641 GSG1LQ6UXU4 331 aa8.4□□□□□ -1.06
CSPG4P1Y-201ENST00000306641 UFC1Q9Y3C8 167 aa8.4□□□□□ -1.06
CSPG4P1Y-201ENST00000306641 CMYA5Q8N3K9 4069 aa8.39□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 MGAM2Q2M2H8 2515 aa8.39□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 SNRPGP15A8MWD9 76 aa8.39□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 A8MWP6 167 aa8.39□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 F8W735 103 aaPredicted RBP8.39□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 SSSCA1O60232 199 aa8.39□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 YIF1AO95070 293 aa8.39□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 CSN3P07498 182 aa8.39□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 POLR2GP62487 172 aaKnown RBP eCLIP8.39□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 SLC16A13Q7RTY0 426 aa8.39□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 OR4X1Q8NH49 305 aa8.39□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 SLC35E1Q96K37 410 aa8.39□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 OR10C1Q96KK4 312 aa8.39□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 MARVELD1Q9BSK0 173 aa8.39□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 CHRDL1Q9BU40 450 aa8.39□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 ZNF436Q9C0F3 470 aaPredicted RBP8.39□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 FNDC4Q9H6D8 234 aaPredicted RBP8.39□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 AURKAIP1Q9NWT8 199 aaPredicted RBP8.39□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 SIGLEC8Q9NYZ4 499 aa8.39□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 STRAPQ9Y3F4 350 aaKnown RBP8.39□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 TRAV30A0A087WSZ9 112 aa8.38□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 C2orf70A6NJV1 201 aa8.38□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 H3BP45 60 aa8.38□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 L7N2F9 121 aa8.38□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 GOSR2O14653 212 aa8.38□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 CLN5O75503 358 aa8.38□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 PRB2P02812 416 aaPredicted RBP8.38□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 RND2P52198 227 aa8.38□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 VAMP2P63027 116 aa8.38□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 ID3Q02535 119 aa8.38□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 CD69Q07108 199 aa8.38□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 SPANXN5Q5MJ07 72 aa8.38□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 LCN12Q6JVE5 192 aa8.38□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 HAPLN4Q86UW8 402 aa8.38□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 MRAPQ8TCY5 172 aa8.38□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 TMEM190Q8WZ59 177 aa8.38□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 MARC2Q969Z3 335 aa8.38□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 RAB40CQ96S21 281 aa8.38□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 C20orf24Q9BUV8 137 aa8.38□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 PSENENQ9NZ42 101 aa8.38□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 ZNF256Q9Y2P7 627 aaPredicted RBP8.38□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 SORL1Q92673 2214 aa8.38□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 VWFP04275 2813 aa8.38□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 C15orf62A8K5M9 175 aa8.37□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 SSNA1O43805 119 aa8.37□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 TMEM50AO95807 157 aa8.37□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 IGLV1-51P01701 117 aa8.37□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 CTSGP08311 255 aa8.37□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 PVALBP20472 110 aaPredicted RBP8.37□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 BMI1P35226 326 aa8.37□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 ADMP35318 185 aa8.37□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 ELLP55199 621 aaPredicted RBP8.37□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 KRTAP10-11P60412 298 aa8.37□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 S100A10P60903 97 aa8.37□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 UNQ9165/PRO28630Q6UXU0 137 aa8.37□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 ZNF600Q6ZNG1 722 aa8.37□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 OR1S2Q8NGQ3 325 aa8.37□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 OR2K2Q8NGT1 345 aa8.37□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 TMEM170AQ8WVE7 144 aa8.37□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 ACY3Q96HD9 319 aa8.37□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 C2orf50Q96LR7 162 aa8.37□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 GINS3Q9BRX5 216 aa8.37□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 DAZ1Q9NQZ3 744 aaKnown RBP8.37□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 RCL1Q9Y2P8 373 aaKnown RBP8.37□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 LSM5Q9Y4Y9 91 aaKnown RBP8.37□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 TMEM213A2RRL7 107 aa8.36□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 MBPP02686 304 aaPredicted RBP8.36□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 FOLR2P14207 255 aa8.36□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 GP9P14770 177 aa8.36□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 SPNP16150 400 aa8.36□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 CBLN1P23435 193 aa8.36□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 OR10J1P30954 320 aa8.36□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 GPX4P36969 197 aaPredicted RBP8.36□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 MLANAQ16655 118 aa8.36□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 TM4SF20Q53R12 229 aa8.36□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 PRSS54Q6PEW0 395 aa8.36□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 IL34Q6ZMJ4 242 aa8.36□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 TMEM116Q8NCL8 245 aa8.36□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 CACNG8Q8WXS5 425 aa8.36□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 SMIM8Q96KF7 97 aa8.36□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 PRR25Q96S07 402 aa8.36□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 TECRQ9NZ01 308 aaKnown RBP8.36□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 MRPL27Q9P0M9 148 aaKnown RBP8.36□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 PUS1Q9Y606 427 aaKnown RBP eCLIP8.36□□□□□ -1.07
CSPG4P1Y-201ENST00000306641 IGHV3OR16-8A0A075B7F1 116 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms