RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 ST20Q9HBF5 79 aa9.02□□□□□ -0.97
LSM3-201ENST00000306024 SLC25A15Q9Y619 301 aa9.02□□□□□ -0.97
LSM3-201ENST00000306024 DSPP15924 2871 aaKnown RBP9.02□□□□□ -0.97
LSM3-201ENST00000306024 IGHV1-18A0A0C4DH31 117 aa9.02□□□□□ -0.97
LSM3-201ENST00000306024 CHEK1O14757 476 aa9.02□□□□□ -0.97
LSM3-201ENST00000306024 CD40P25942 277 aa9.02□□□□□ -0.97
LSM3-201ENST00000306024 FGF12P61328 243 aa9.02□□□□□ -0.97
LSM3-201ENST00000306024 RPL8P62917 257 aaKnown RBP9.02□□□□□ -0.97
LSM3-201ENST00000306024 RSPO1Q2MKA7 263 aaPredicted RBP9.02□□□□□ -0.97
LSM3-201ENST00000306024 SPSB4Q96A44 273 aa9.02□□□□□ -0.97
LSM3-201ENST00000306024 PLPPR2Q96GM1 343 aa9.02□□□□□ -0.97
LSM3-201ENST00000306024 CA1P00915 261 aaPredicted RBP9.01□□□□□ -0.97
LSM3-201ENST00000306024 TMEM14EPQ6UXP3 125 aa9.01□□□□□ -0.97
LSM3-201ENST00000306024 SCCPDHQ8NBX0 429 aa9.01□□□□□ -0.97
LSM3-201ENST00000306024 DEFB108BQ8NET1 73 aa9.01□□□□□ -0.97
LSM3-201ENST00000306024 RNASE6Q93091 150 aaKnown RBP9.01□□□□□ -0.97
LSM3-201ENST00000306024 HILPDAQ9Y5L2 63 aa9.01□□□□□ -0.97
LSM3-201ENST00000306024 TAX1BP3O14907 124 aa9.01□□□□□ -0.97
LSM3-201ENST00000306024 CD5LO43866 347 aa9.01□□□□□ -0.97
LSM3-201ENST00000306024 PRR31Q5SQ13 230 aa9.01□□□□□ -0.97
LSM3-201ENST00000306024 OR2K2Q8NGT1 345 aa9.01□□□□□ -0.97
LSM3-201ENST00000306024 CLUHP3Q96NS8 147 aa9.01□□□□□ -0.97
LSM3-201ENST00000306024 SIGMAR1Q99720 223 aa9.01□□□□□ -0.97
LSM3-201ENST00000306024 OR51B2Q9Y5P1 312 aa9.01□□□□□ -0.97
LSM3-201ENST00000306024 CDIPTO14735 213 aa9.01□□□□□ -0.97
LSM3-201ENST00000306024 BVES-AS1Q5T3Y7 98 aa9.01□□□□□ -0.97
LSM3-201ENST00000306024 DAZAP1Q96EP5 407 aaKnown RBP9.01□□□□□ -0.97
LSM3-201ENST00000306024 ZNF835Q9Y2P0 537 aa9.01□□□□□ -0.97
LSM3-201ENST00000306024 LRRC30A6NM36 301 aa9□□□□□ -0.97
LSM3-201ENST00000306024 FABP2P12104 132 aa9□□□□□ -0.97
LSM3-201ENST00000306024 RPS20P60866 119 aaKnown RBP9□□□□□ -0.97
LSM3-201ENST00000306024 PSG7Q13046 419 aa9□□□□□ -0.97
LSM3-201ENST00000306024 SVIPQ8NHG7 77 aa9□□□□□ -0.97
LSM3-201ENST00000306024 OR2V2Q96R30 315 aa9□□□□□ -0.97
LSM3-201ENST00000306024 SSBP4Q9BWG4 385 aaPredicted RBP9□□□□□ -0.97
LSM3-201ENST00000306024 SPCS1Q9Y6A9 102 aa9□□□□□ -0.97
LSM3-201ENST00000306024 J3QW42 95 aa9□□□□□ -0.97
LSM3-201ENST00000306024 CX3CL1P78423 397 aa9□□□□□ -0.97
LSM3-201ENST00000306024 BSPH1Q075Z2 132 aa9□□□□□ -0.97
LSM3-201ENST00000306024 DRAM1Q8N682 238 aa9□□□□□ -0.97
LSM3-201ENST00000306024 HSD17B10Q99714 261 aaKnown RBP9□□□□□ -0.97
LSM3-201ENST00000306024 FAM231BA6NCW3 169 aa9□□□□□ -0.97
LSM3-201ENST00000306024 CGAP01215 116 aa9□□□□□ -0.97
LSM3-201ENST00000306024 SSTR5P35346 364 aa9□□□□□ -0.97
LSM3-201ENST00000306024 GLRXP35754 106 aa9□□□□□ -0.97
LSM3-201ENST00000306024 MPV17P39210 176 aa9□□□□□ -0.97
LSM3-201ENST00000306024 LINC00310P59036 64 aa9□□□□□ -0.97
LSM3-201ENST00000306024 HIST1H1AQ02539 215 aaPredicted RBP9□□□□□ -0.97
LSM3-201ENST00000306024 CEACAM21Q3KPI0 293 aa9□□□□□ -0.97
LSM3-201ENST00000306024 OR10AG1Q8NH19 301 aa9□□□□□ -0.97
LSM3-201ENST00000306024 JKAMPQ9P055 326 aa9□□□□□ -0.97
LSM3-201ENST00000306024 TRAV8-6A0A0B4J262 113 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 HLA-DRB1P01911 266 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 HBZP02008 142 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 ZNF137PP52743 207 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 TNFAIP6P98066 277 aaPredicted RBP8.99□□□□□ -0.97
LSM3-201ENST00000306024 OR10W1Q8NGF6 305 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 MCRIP2Q9BUT9 160 aaKnown RBP8.99□□□□□ -0.97
LSM3-201ENST00000306024 CXXC4Q9H2H0 198 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 TP73-AS1Q9UF72 201 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 FRYQ5TBA9 3013 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 TRBV20OR9-2A0A075B6H5 130 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 SYNGR1O43759 233 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 TAS2R45P59539 299 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 TMEM136Q6ZRR5 245 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 DEFB125Q8N687 156 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 TMEM167BQ9NRX6 74 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 ZNF355PQ9NSJ1 428 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 FAM90A10PA6NDY2 464 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 FAM90A18PA6NE21 464 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 FAM90A16PA6NEW6 464 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 FAM90A20PA6NIJ5 464 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 FAM90A8PA6NJQ4 464 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 FAM90A7PA6NKC0 464 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 FAM90A22PA8MWA6 464 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 FAM90A12PA8MX19 464 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 FAM90A5PA8MXJ8 464 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 FAM90A23PA8MXZ1 464 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 IGKV3-15P01624 115 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 PRB1P04280 392 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 OR5AL1P0C617 328 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 FAM90A15PP0C7V4 464 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 FAM90A13PP0C7W8 464 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 FAM90A14PP0C7W9 464 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 FAM90A24PP0C7X0 464 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 C5orf17Q8NAS9 161 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 PPP1R35Q8TAP8 253 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 CHODLQ9H9P2 273 aa8.99□□□□□ -0.97
LSM3-201ENST00000306024 YLPM1P49750 1951 aaKnown RBP8.99□□□□□ -0.97
LSM3-201ENST00000306024 IGKV1-6A0A0C4DH72 117 aa8.98□□□□□ -0.97
LSM3-201ENST00000306024 TEX50A0A1B0GTY4 177 aa8.98□□□□□ -0.97
LSM3-201ENST00000306024 MPDU1O75352 247 aa8.98□□□□□ -0.97
LSM3-201ENST00000306024 STPG3Q8N7X2 389 aa8.98□□□□□ -0.97
LSM3-201ENST00000306024 C18orf32Q8TCD1 76 aa8.98□□□□□ -0.97
LSM3-201ENST00000306024 GALMQ96C23 342 aa8.98□□□□□ -0.97
LSM3-201ENST00000306024 DMXL2Q8TDJ6 3036 aa8.98□□□□□ -0.97
LSM3-201ENST00000306024 J3QT63 122 aa8.98□□□□□ -0.97
LSM3-201ENST00000306024 IGKV1-39P01597 117 aa8.98□□□□□ -0.97
LSM3-201ENST00000306024 IGKV1D-39P04432 117 aa8.98□□□□□ -0.97
LSM3-201ENST00000306024 RHOGP84095 191 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms