RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 NDUFB8O95169 186 aa10.76□□□□□ -0.69
TRIM35-201ENST00000305364 VWC2Q2TAL6 325 aa10.76□□□□□ -0.69
TRIM35-201ENST00000305364 KRTAP27-1Q3LI81 207 aa10.76□□□□□ -0.69
TRIM35-201ENST00000305364 WDR86Q86TI4 376 aa10.76□□□□□ -0.69
TRIM35-201ENST00000305364 NUDT10Q8NFP7 164 aa10.76□□□□□ -0.69
TRIM35-201ENST00000305364 SNRNP40Q96DI7 357 aaKnown RBP10.76□□□□□ -0.69
TRIM35-201ENST00000305364 IGKV3D-15A0A087WSY6 115 aa10.76□□□□□ -0.69
TRIM35-201ENST00000305364 A0A087X0K7 114 aa10.76□□□□□ -0.69
TRIM35-201ENST00000305364 C21orf140B9A014 251 aa10.76□□□□□ -0.69
TRIM35-201ENST00000305364 PEX7O00628 323 aa10.76□□□□□ -0.69
TRIM35-201ENST00000305364 ARF6P62330 175 aa10.76□□□□□ -0.69
TRIM35-201ENST00000305364 AARDQ4LEZ3 155 aa10.76□□□□□ -0.69
TRIM35-201ENST00000305364 MOB3BQ86TA1 216 aa10.76□□□□□ -0.69
TRIM35-201ENST00000305364 MOGAT3Q86VF5 341 aa10.76□□□□□ -0.69
TRIM35-201ENST00000305364 NUP35Q8NFH5 326 aa10.76□□□□□ -0.69
TRIM35-201ENST00000305364 MYO18BQ8IUG5 2567 aa10.76□□□□□ -0.69
TRIM35-201ENST00000305364 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.76□□□□□ -0.69
TRIM35-201ENST00000305364 GNG5P63218 68 aa10.76□□□□□ -0.69
TRIM35-201ENST00000305364 FNDC4Q9H6D8 234 aaPredicted RBP10.76□□□□□ -0.69
TRIM35-201ENST00000305364 ST20Q9HBF5 79 aa10.76□□□□□ -0.69
TRIM35-201ENST00000305364 CALYQ9NYX4 217 aa10.76□□□□□ -0.69
TRIM35-201ENST00000305364 A0A1W2PRE2 83 aa10.76□□□□□ -0.69
TRIM35-201ENST00000305364 GAGE12BA1L429 117 aa10.76□□□□□ -0.69
TRIM35-201ENST00000305364 LIPFP07098 398 aa10.76□□□□□ -0.69
TRIM35-201ENST00000305364 MORN2Q502X0 79 aa10.76□□□□□ -0.69
TRIM35-201ENST00000305364 HARBI1Q96MB7 349 aa10.76□□□□□ -0.69
TRIM35-201ENST00000305364 TNFRSF19Q9NS68 423 aa10.76□□□□□ -0.69
TRIM35-201ENST00000305364 C15orf61A6NNL5 157 aa10.75□□□□□ -0.69
TRIM35-201ENST00000305364 PLGLAQ15195 96 aa10.75□□□□□ -0.69
TRIM35-201ENST00000305364 H1FXQ92522 213 aaKnown RBP10.75□□□□□ -0.69
TRIM35-201ENST00000305364 RBX1P62877 108 aa10.75□□□□□ -0.69
TRIM35-201ENST00000305364 NAA38Q9BRA0 125 aaKnown RBP10.75□□□□□ -0.69
TRIM35-201ENST00000305364 DOPEY2Q9Y3R5 2298 aa10.75□□□□□ -0.69
TRIM35-201ENST00000305364 LOC389332A0A1B0GUA5 103 aa10.75□□□□□ -0.69
TRIM35-201ENST00000305364 APELAP0DMC3 54 aa10.75□□□□□ -0.69
TRIM35-201ENST00000305364 GPR183P32249 361 aa10.75□□□□□ -0.69
TRIM35-201ENST00000305364 LINC00310P59036 64 aa10.75□□□□□ -0.69
TRIM35-201ENST00000305364 TMEM249Q2WGJ8 235 aa10.75□□□□□ -0.69
TRIM35-201ENST00000305364 SPACA3Q8IXA5 215 aa10.75□□□□□ -0.69
TRIM35-201ENST00000305364 C19orf24Q9BVV8 132 aa10.75□□□□□ -0.69
TRIM35-201ENST00000305364 FAM208BQ5VWN6 2430 aa10.74□□□□□ -0.69
TRIM35-201ENST00000305364 IGHV3-21A0A0B4J1V1 117 aa10.74□□□□□ -0.69
TRIM35-201ENST00000305364 C7orf71A4D174 169 aa10.74□□□□□ -0.69
TRIM35-201ENST00000305364 REG1BP48304 166 aa10.74□□□□□ -0.69
TRIM35-201ENST00000305364 MLANAQ16655 118 aa10.74□□□□□ -0.69
TRIM35-201ENST00000305364 LRRC10Q5BKY1 277 aa10.74□□□□□ -0.69
TRIM35-201ENST00000305364 OR10X1Q8NGY0 326 aa10.74□□□□□ -0.69
TRIM35-201ENST00000305364 OR52E5Q8NH55 327 aa10.74□□□□□ -0.69
TRIM35-201ENST00000305364 NPIPB3Q92617 1050 aa10.74□□□□□ -0.69
TRIM35-201ENST00000305364 C11orf52Q96A22 123 aa10.74□□□□□ -0.69
TRIM35-201ENST00000305364 PILRBQ9UKJ0 227 aa10.74□□□□□ -0.69
TRIM35-201ENST00000305364 IGHV2-70DA0A0C4DH43 119 aa10.74□□□□□ -0.69
TRIM35-201ENST00000305364 SPAARA0A1B0GVQ0 90 aa10.74□□□□□ -0.69
TRIM35-201ENST00000305364 COMPP49747 757 aaPredicted RBP10.74□□□□□ -0.69
TRIM35-201ENST00000305364 PLP1P60201 277 aa10.74□□□□□ -0.69
TRIM35-201ENST00000305364 RANBP2P49792 3224 aaKnown RBP10.74□□□□□ -0.69
TRIM35-201ENST00000305364 PRR14LQ5THK1 2151 aa10.73□□□□□ -0.69
TRIM35-201ENST00000305364 A0A1W2PN81 502 aa10.73□□□□□ -0.69
TRIM35-201ENST00000305364 IGLC7A0M8Q6 106 aa10.73□□□□□ -0.69
TRIM35-201ENST00000305364 GGTLC3B5MD39 225 aa10.73□□□□□ -0.69
TRIM35-201ENST00000305364 CORTO00230 105 aa10.73□□□□□ -0.69
TRIM35-201ENST00000305364 CT45A10P0DMU9 189 aa10.73□□□□□ -0.69
TRIM35-201ENST00000305364 CD24P25063 80 aa10.73□□□□□ -0.69
TRIM35-201ENST00000305364 NMUP48645 174 aa10.73□□□□□ -0.69
TRIM35-201ENST00000305364 VWA1Q6PCB0 445 aa10.73□□□□□ -0.69
TRIM35-201ENST00000305364 WDR82Q6UXN9 313 aa10.73□□□□□ -0.69
TRIM35-201ENST00000305364 FAM168AQ92567 244 aa10.73□□□□□ -0.69
TRIM35-201ENST00000305364 TNCP24821 2201 aa10.73□□□□□ -0.69
TRIM35-201ENST00000305364 FCER1GP30273 86 aa10.73□□□□□ -0.69
TRIM35-201ENST00000305364 ZNF138P52744 262 aa10.73□□□□□ -0.69
TRIM35-201ENST00000305364 EBLN2Q6P2I7 272 aa10.73□□□□□ -0.69
TRIM35-201ENST00000305364 INO80CQ6PI98 192 aaPredicted RBP10.73□□□□□ -0.69
TRIM35-201ENST00000305364 OR1L8Q8NGR8 309 aa10.73□□□□□ -0.69
TRIM35-201ENST00000305364 NCOR2Q9Y618 2525 aa10.73□□□□□ -0.69
TRIM35-201ENST00000305364 H3BUT2 72 aa10.73□□□□□ -0.69
TRIM35-201ENST00000305364 VDAC2P45880 294 aaPredicted RBP10.73□□□□□ -0.69
TRIM35-201ENST00000305364 SPOCK3Q9BQ16 436 aa10.73□□□□□ -0.69
TRIM35-201ENST00000305364 MRPL32Q9BYC8 188 aaKnown RBP10.73□□□□□ -0.69
TRIM35-201ENST00000305364 HILPDAQ9Y5L2 63 aa10.73□□□□□ -0.69
TRIM35-201ENST00000305364 PTPRSQ13332 1948 aa10.73□□□□□ -0.69
TRIM35-201ENST00000305364 KMT2EQ8IZD2 1858 aa10.73□□□□□ -0.69
TRIM35-201ENST00000305364 SYS1-DBNDD2H3BUS1 97 aa10.73□□□□□ -0.69
TRIM35-201ENST00000305364 K7EQM0 130 aa10.73□□□□□ -0.69
TRIM35-201ENST00000305364 Q0VFX4 171 aa10.73□□□□□ -0.69
TRIM35-201ENST00000305364 C5orf30Q96GV9 206 aa10.73□□□□□ -0.69
TRIM35-201ENST00000305364 IFI27L2Q9H2X8 130 aa10.73□□□□□ -0.69
TRIM35-201ENST00000305364 AP5S1Q9NUS5 200 aa10.73□□□□□ -0.69
TRIM35-201ENST00000305364 SAA2-SAA4A0A096LPE2 208 aa10.72□□□□□ -0.69
TRIM35-201ENST00000305364 TRGV8A0A0C4DH27 118 aa10.72□□□□□ -0.69
TRIM35-201ENST00000305364 IQCF6A8MYZ5 107 aa10.72□□□□□ -0.69
TRIM35-201ENST00000305364 M0R1B8 84 aa10.72□□□□□ -0.69
TRIM35-201ENST00000305364 PRNTQ86SH4 94 aa10.72□□□□□ -0.69
TRIM35-201ENST00000305364 hADV38S2A0JD32 116 aa10.72□□□□□ -0.69
TRIM35-201ENST00000305364 ERVK11-1P61568 191 aa10.72□□□□□ -0.69
TRIM35-201ENST00000305364 PET117Q6UWS5 81 aa10.72□□□□□ -0.69
TRIM35-201ENST00000305364 PERPQ96FX8 193 aa10.72□□□□□ -0.69
TRIM35-201ENST00000305364 CTRLP40313 264 aa10.72□□□□□ -0.69
TRIM35-201ENST00000305364 FAM90A9PA6NNJ1 464 aa10.71□□□□□ -0.69
TRIM35-201ENST00000305364 PSG9Q00887 426 aa10.71□□□□□ -0.69
TRIM35-201ENST00000305364 FAM201AQ5SY85 155 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms