RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 DUTP33316 252 aaKnown RBP11.61□□□□□ -0.55
PRKCB-201ENST00000303531 FAM168AQ92567 244 aa11.61□□□□□ -0.55
PRKCB-201ENST00000303531 VSIRQ9H7M9 311 aa11.61□□□□□ -0.55
PRKCB-201ENST00000303531 NAPSAO96009 420 aa11.61□□□□□ -0.55
PRKCB-201ENST00000303531 TTC32Q5I0X7 151 aa11.61□□□□□ -0.55
PRKCB-201ENST00000303531 NEUROG1Q92886 237 aa11.61□□□□□ -0.55
PRKCB-201ENST00000303531 TMEM133Q9H2Q1 129 aa11.61□□□□□ -0.55
PRKCB-201ENST00000303531 IGHV1-18A0A0C4DH31 117 aa11.6□□□□□ -0.55
PRKCB-201ENST00000303531 ZFP36L1Q07352 338 aaKnown RBP11.6□□□□□ -0.55
PRKCB-201ENST00000303531 NUTF2P61970 127 aaKnown RBP11.6□□□□□ -0.55
PRKCB-201ENST00000303531 CYB5R2Q6BCY4 276 aa11.6□□□□□ -0.55
PRKCB-201ENST00000303531 CDKN1AP38936 164 aa11.6□□□□□ -0.55
PRKCB-201ENST00000303531 FAM71F2Q6NXP2 309 aa11.6□□□□□ -0.55
PRKCB-201ENST00000303531 ITLN2Q8WWU7 325 aaPredicted RBP11.6□□□□□ -0.55
PRKCB-201ENST00000303531 DUX3Q96PT4 197 aa11.6□□□□□ -0.55
PRKCB-201ENST00000303531 TCRBV4S1A1TA0A5B7 111 aa11.6□□□□□ -0.55
PRKCB-201ENST00000303531 DNAL4O96015 105 aa11.6□□□□□ -0.55
PRKCB-201ENST00000303531 CD24P25063 80 aa11.6□□□□□ -0.55
PRKCB-201ENST00000303531 TMEM105Q8N8V8 129 aa11.6□□□□□ -0.55
PRKCB-201ENST00000303531 ZNF418Q8TF45 676 aaPredicted RBP11.6□□□□□ -0.55
PRKCB-201ENST00000303531 EPDR1Q9UM22 224 aa11.6□□□□□ -0.55
PRKCB-201ENST00000303531 EFNB3Q15768 340 aa11.59□□□□□ -0.55
PRKCB-201ENST00000303531 DMRTA1Q5VZB9 504 aa11.59□□□□□ -0.55
PRKCB-201ENST00000303531 C7orf69Q9H7B7 122 aa11.59□□□□□ -0.55
PRKCB-201ENST00000303531 NDUFA3O95167 84 aa11.59□□□□□ -0.55
PRKCB-201ENST00000303531 PRCDQ00LT1 54 aa11.59□□□□□ -0.55
PRKCB-201ENST00000303531 RNF125Q96EQ8 232 aa11.59□□□□□ -0.55
PRKCB-201ENST00000303531 LINC00587B1AMM8 73 aa11.59□□□□□ -0.55
PRKCB-201ENST00000303531 HIST1H2BKO60814 126 aa11.59□□□□□ -0.55
PRKCB-201ENST00000303531 HIST1H2BJP06899 126 aa11.59□□□□□ -0.55
PRKCB-201ENST00000303531 HIST1H2BOP23527 126 aa11.59□□□□□ -0.55
PRKCB-201ENST00000303531 HIST1H2BBP33778 126 aa11.59□□□□□ -0.55
PRKCB-201ENST00000303531 HIST1H2BDP58876 126 aa11.59□□□□□ -0.55
PRKCB-201ENST00000303531 HIST1H2BCP62807 126 aa11.59□□□□□ -0.55
PRKCB-201ENST00000303531 HIST2H2BEQ16778 126 aa11.59□□□□□ -0.55
PRKCB-201ENST00000303531 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.59□□□□□ -0.55
PRKCB-201ENST00000303531 HIST1H2BHQ93079 126 aa11.59□□□□□ -0.55
PRKCB-201ENST00000303531 TMEM101Q96IK0 257 aa11.59□□□□□ -0.55
PRKCB-201ENST00000303531 HIST1H2BNQ99877 126 aa11.59□□□□□ -0.55
PRKCB-201ENST00000303531 HIST1H2BMQ99879 126 aa11.59□□□□□ -0.55
PRKCB-201ENST00000303531 LEPP41159 167 aa11.59□□□□□ -0.55
PRKCB-201ENST00000303531 NABP1Q96AH0 204 aa11.59□□□□□ -0.55
PRKCB-201ENST00000303531 SPTBN2O15020 2390 aa11.59□□□□□ -0.55
PRKCB-201ENST00000303531 OCC1Q8TAD7 63 aa11.59□□□□□ -0.55
PRKCB-201ENST00000303531 FOXG1P55316 489 aaPredicted RBP11.58□□□□□ -0.55
PRKCB-201ENST00000303531 PVRIGQ6DKI7 326 aa11.58□□□□□ -0.55
PRKCB-201ENST00000303531 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.58□□□□□ -0.56
PRKCB-201ENST00000303531 C1QL4Q86Z23 238 aa11.58□□□□□ -0.56
PRKCB-201ENST00000303531 ALKBH7Q9BT30 221 aaPredicted RBP11.58□□□□□ -0.56
PRKCB-201ENST00000303531 OSTCQ9NRP0 149 aa11.58□□□□□ -0.56
PRKCB-201ENST00000303531 A0A1W2PRE2 83 aa11.58□□□□□ -0.56
PRKCB-201ENST00000303531 PCP4P48539 62 aa11.58□□□□□ -0.56
PRKCB-201ENST00000303531 DOCK6Q96HP0 2047 aa11.58□□□□□ -0.56
PRKCB-201ENST00000303531 C2orf88Q9BSF0 95 aa11.58□□□□□ -0.56
PRKCB-201ENST00000303531 IGKV1-27A0A075B6S5 117 aa11.58□□□□□ -0.56
PRKCB-201ENST00000303531 LYNX1G3V0Z9 82 aa11.58□□□□□ -0.56
PRKCB-201ENST00000303531 LYNX1P0DP58 116 aa11.58□□□□□ -0.56
PRKCB-201ENST00000303531 GGNQ86UU5 652 aa11.58□□□□□ -0.56
PRKCB-201ENST00000303531 LHFPL1Q86WI0 220 aa11.58□□□□□ -0.56
PRKCB-201ENST00000303531 NUP37Q8NFH4 326 aa11.58□□□□□ -0.56
PRKCB-201ENST00000303531 FABP5P3A8MUU1 101 aa11.57□□□□□ -0.56
PRKCB-201ENST00000303531 WDR83OSQ9Y284 106 aa11.57□□□□□ -0.56
PRKCB-201ENST00000303531 SUPT4H1P63272 117 aaKnown RBP11.57□□□□□ -0.56
PRKCB-201ENST00000303531 PAX1P15863 534 aa11.57□□□□□ -0.56
PRKCB-201ENST00000303531 RNASE6Q93091 150 aaKnown RBP11.57□□□□□ -0.56
PRKCB-201ENST00000303531 TMEM50AO95807 157 aa11.57□□□□□ -0.56
PRKCB-201ENST00000303531 MBD3L1Q8WWY6 194 aa11.57□□□□□ -0.56
PRKCB-201ENST00000303531 FAM90A9PA6NNJ1 464 aa11.57□□□□□ -0.56
PRKCB-201ENST00000303531 GLMPQ8WWB7 406 aa11.57□□□□□ -0.56
PRKCB-201ENST00000303531 DOCK7Q96N67 2140 aa11.56□□□□□ -0.56
PRKCB-201ENST00000303531 NIT1Q86X76 327 aa11.56□□□□□ -0.56
PRKCB-201ENST00000303531 HEPN1Q6WQI6 88 aa11.56□□□□□ -0.56
PRKCB-201ENST00000303531 OR10W1Q8NGF6 305 aa11.56□□□□□ -0.56
PRKCB-201ENST00000303531 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.56□□□□□ -0.56
PRKCB-201ENST00000303531 KLHDC3Q9BQ90 382 aa11.56□□□□□ -0.56
PRKCB-201ENST00000303531 A0A1B0GWB2 263 aa11.56□□□□□ -0.56
PRKCB-201ENST00000303531 NTN3O00634 580 aaPredicted RBP11.56□□□□□ -0.56
PRKCB-201ENST00000303531 APOMO95445 188 aa11.56□□□□□ -0.56
PRKCB-201ENST00000303531 IGHV1-46P01743 117 aa11.56□□□□□ -0.56
PRKCB-201ENST00000303531 CD5P06127 495 aa11.56□□□□□ -0.56
PRKCB-201ENST00000303531 ASCL2Q99929 193 aa11.56□□□□□ -0.56
PRKCB-201ENST00000303531 COLCA1Q6ZS62 124 aa11.56□□□□□ -0.56
PRKCB-201ENST00000303531 FOXF2Q12947 444 aa11.56□□□□□ -0.56
PRKCB-201ENST00000303531 SRSF7Q16629 238 aaKnown RBP eCLIP11.56□□□□□ -0.568e-14■■■■■ 44.3
PRKCB-201ENST00000303531 OR10J3Q5JRS4 329 aa11.56□□□□□ -0.56
PRKCB-201ENST00000303531 TEX38Q6PEX7 206 aa11.56□□□□□ -0.56
PRKCB-201ENST00000303531 LINC01587Q99440 93 aa11.56□□□□□ -0.56
PRKCB-201ENST00000303531 SLC50A1Q9BRV3 221 aa11.56□□□□□ -0.56
PRKCB-201ENST00000303531 CYTL1Q9NRR1 136 aa11.56□□□□□ -0.56
PRKCB-201ENST00000303531 LAMTOR2Q9Y2Q5 125 aa11.56□□□□□ -0.56
PRKCB-201ENST00000303531 SPCS1Q9Y6A9 102 aa11.56□□□□□ -0.56
PRKCB-201ENST00000303531 TREML4Q6UXN2 200 aa11.55□□□□□ -0.56
PRKCB-201ENST00000303531 PSG8Q9UQ74 426 aa11.55□□□□□ -0.56
PRKCB-201ENST00000303531 KIAA2026Q5HYC2 2103 aa11.55□□□□□ -0.56
PRKCB-201ENST00000303531 ACACAQ13085 2346 aa11.55□□□□□ -0.56
PRKCB-201ENST00000303531 WDR90Q96KV7 1748 aa11.55□□□□□ -0.56
PRKCB-201ENST00000303531 TSPAN13O95857 204 aa11.55□□□□□ -0.56
PRKCB-201ENST00000303531 UBE2CO00762 179 aa11.55□□□□□ -0.56
PRKCB-201ENST00000303531 CLPSP04118 112 aa11.55□□□□□ -0.56
PRKCB-201ENST00000303531 JKAMPQ9P055 326 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 276.4 ms