RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 POLR3KQ9Y2Y1 108 aaPredicted RBP11.58□□□□□ -0.56
SHCBP1-201ENST00000303383 TRAV40A0A0B4J280 105 aa11.58□□□□□ -0.56
SHCBP1-201ENST00000303383 SRP19P09132 144 aaKnown RBP11.58□□□□□ -0.56
SHCBP1-201ENST00000303383 SLC25A16P16260 332 aa11.58□□□□□ -0.56
SHCBP1-201ENST00000303383 TAGLN2P37802 199 aaKnown RBP11.58□□□□□ -0.56
SHCBP1-201ENST00000303383 FAM78BQ5VT40 261 aa11.58□□□□□ -0.56
SHCBP1-201ENST00000303383 CLRN3Q8NCR9 226 aa11.58□□□□□ -0.56
SHCBP1-201ENST00000303383 FAM103A1Q9BTL3 118 aaKnown RBP11.58□□□□□ -0.56
SHCBP1-201ENST00000303383 ABCA1O95477 2261 aa11.57□□□□□ -0.56
SHCBP1-201ENST00000303383 NDUFA3O95167 84 aa11.57□□□□□ -0.56
SHCBP1-201ENST00000303383 MSMBP08118 114 aa11.57□□□□□ -0.56
SHCBP1-201ENST00000303383 GATA2P23769 480 aaPredicted RBP11.57□□□□□ -0.56
SHCBP1-201ENST00000303383 NPBWR1P48145 328 aa11.57□□□□□ -0.56
SHCBP1-201ENST00000303383 C20orf24Q9BUV8 137 aa11.57□□□□□ -0.56
SHCBP1-201ENST00000303383 C7orf69Q9H7B7 122 aa11.57□□□□□ -0.56
SHCBP1-201ENST00000303383 SLC45A2Q9UMX9 530 aa11.57□□□□□ -0.56
SHCBP1-201ENST00000303383 F11RQ9Y624 299 aaKnown RBP11.57□□□□□ -0.56
SHCBP1-201ENST00000303383 CENPVL3A0A0U1RRI6 287 aa11.57□□□□□ -0.56
SHCBP1-201ENST00000303383 SEC14L6B5MCN3 397 aa11.57□□□□□ -0.56
SHCBP1-201ENST00000303383 PAX8Q06710 450 aa11.57□□□□□ -0.56
SHCBP1-201ENST00000303383 RASL11BQ9BPW5 248 aa11.57□□□□□ -0.56
SHCBP1-201ENST00000303383 FNDC4Q9H6D8 234 aaPredicted RBP11.57□□□□□ -0.56
SHCBP1-201ENST00000303383 RPS10P5Q9NQ39 176 aa11.57□□□□□ -0.56
SHCBP1-201ENST00000303383 CST9LP1Q5W188 147 aa11.56□□□□□ -0.56
SHCBP1-201ENST00000303383 C19orf35Q6ZS72 473 aa11.56□□□□□ -0.56
SHCBP1-201ENST00000303383 CYP2G1PQ6ZSU1 146 aa11.56□□□□□ -0.56
SHCBP1-201ENST00000303383 NIPSNAP3BQ9BS92 247 aa11.56□□□□□ -0.56
SHCBP1-201ENST00000303383 SLC25A33Q9BSK2 321 aa11.56□□□□□ -0.56
SHCBP1-201ENST00000303383 UTP20O75691 2785 aaKnown RBP11.56□□□□□ -0.56
SHCBP1-201ENST00000303383 A0A1B0GV90 55 aa11.56□□□□□ -0.56
SHCBP1-201ENST00000303383 B4DSR2 109 aa11.56□□□□□ -0.56
SHCBP1-201ENST00000303383 TEX22C9J3V5 150 aa11.56□□□□□ -0.56
SHCBP1-201ENST00000303383 CXorf1O96002 111 aa11.56□□□□□ -0.56
SHCBP1-201ENST00000303383 TMEM88Q6PEY1 159 aa11.56□□□□□ -0.56
SHCBP1-201ENST00000303383 ZNF114Q8NC26 417 aa11.56□□□□□ -0.56
SHCBP1-201ENST00000303383 OR4F5Q8NH21 305 aa11.56□□□□□ -0.56
SHCBP1-201ENST00000303383 C1orf159Q96HA4 380 aa11.56□□□□□ -0.56
SHCBP1-201ENST00000303383 OR4F4Q96R69 305 aa11.56□□□□□ -0.56
SHCBP1-201ENST00000303383 SRSF8Q9BRL6 282 aaKnown RBP11.56□□□□□ -0.56
SHCBP1-201ENST00000303383 WNT10AQ9GZT5 417 aa11.56□□□□□ -0.56
SHCBP1-201ENST00000303383 ANKRD17O75179 2603 aaKnown RBP11.56□□□□□ -0.56
SHCBP1-201ENST00000303383 UBE2G2P60604 165 aa11.56□□□□□ -0.56
SHCBP1-201ENST00000303383 MEF2BQ02080 365 aaPredicted RBP11.56□□□□□ -0.56
SHCBP1-201ENST00000303383 ARPC1AQ92747 370 aa11.56□□□□□ -0.56
SHCBP1-201ENST00000303383 CENPEQ02224 2701 aa11.56□□□□□ -0.56
SHCBP1-201ENST00000303383 IGKV1OR2-108A0A075B7D4 117 aa11.55□□□□□ -0.56
SHCBP1-201ENST00000303383 PAGE4O60829 102 aa11.55□□□□□ -0.56
SHCBP1-201ENST00000303383 ARL14EPLP0DKL9 152 aa11.55□□□□□ -0.56
SHCBP1-201ENST00000303383 RUSC1-AS1Q66K80 236 aa11.55□□□□□ -0.56
SHCBP1-201ENST00000303383 UBR5O95071 2799 aaPredicted RBP11.55□□□□□ -0.56
SHCBP1-201ENST00000303383 PTPN13Q12923 2485 aa11.55□□□□□ -0.56
SHCBP1-201ENST00000303383 LINC00869P0C866 280 aa11.55□□□□□ -0.56
SHCBP1-201ENST00000303383 PRR20EP86478 221 aa11.55□□□□□ -0.56
SHCBP1-201ENST00000303383 PRR20CP86479 221 aa11.55□□□□□ -0.56
SHCBP1-201ENST00000303383 PRR20DP86480 221 aa11.55□□□□□ -0.56
SHCBP1-201ENST00000303383 PRR20BP86481 221 aa11.55□□□□□ -0.56
SHCBP1-201ENST00000303383 PRR20AP86496 221 aa11.55□□□□□ -0.56
SHCBP1-201ENST00000303383 BRD3OSQ6XYD6 125 aa11.55□□□□□ -0.56
SHCBP1-201ENST00000303383 HIF1ANQ9NWT6 349 aa11.55□□□□□ -0.56
SHCBP1-201ENST00000303383 IGHV1-69DA0A0B4J2H0 117 aa11.55□□□□□ -0.56
SHCBP1-201ENST00000303383 COX7A2P2O60397 106 aa11.55□□□□□ -0.56
SHCBP1-201ENST00000303383 IGHV1-69P01742 117 aa11.55□□□□□ -0.56
SHCBP1-201ENST00000303383 CX3CL1P78423 397 aa11.55□□□□□ -0.56
SHCBP1-201ENST00000303383 FAM120AOSQ5T036 256 aa11.55□□□□□ -0.56
SHCBP1-201ENST00000303383 ZNF562Q6V9R5 426 aa11.55□□□□□ -0.56
SHCBP1-201ENST00000303383 OR1L6Q8NGR2 347 aa11.55□□□□□ -0.56
SHCBP1-201ENST00000303383 SEPSECSQ9HD40 501 aaKnown RBP11.55□□□□□ -0.56
SHCBP1-201ENST00000303383 ASH1LQ9NR48 2969 aaKnown RBP11.55□□□□□ -0.56
SHCBP1-201ENST00000303383 TAS2R45P59539 299 aa11.54□□□□□ -0.56
SHCBP1-201ENST00000303383 SELENOTP62341 195 aa11.54□□□□□ -0.56
SHCBP1-201ENST00000303383 FLI1Q01543 452 aaPredicted RBP11.54□□□□□ -0.56
SHCBP1-201ENST00000303383 AWAT1Q58HT5 328 aa11.54□□□□□ -0.56
SHCBP1-201ENST00000303383 PIP4P2Q8N4L2 257 aa11.54□□□□□ -0.56
SHCBP1-201ENST00000303383 TNFRSF19Q9NS68 423 aa11.54□□□□□ -0.56
SHCBP1-201ENST00000303383 DOK5Q9P104 306 aa11.54□□□□□ -0.56
SHCBP1-201ENST00000303383 ZNF674Q2M3X9 581 aa11.54□□□□□ -0.56
SHCBP1-201ENST00000303383 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.54□□□□□ -0.562e-8■■■■■ 35.1
SHCBP1-201ENST00000303383 SPNS3Q6ZMD2 512 aa11.54□□□□□ -0.56
SHCBP1-201ENST00000303383 CHTOPQ9Y3Y2 248 aaKnown RBP11.54□□□□□ -0.56
SHCBP1-201ENST00000303383 POLQO75417 2590 aa11.54□□□□□ -0.56
SHCBP1-201ENST00000303383 TCRBV4S1A1TA0A5B7 111 aa11.54□□□□□ -0.56
SHCBP1-201ENST00000303383 FAM74A7A6NL05 159 aa11.54□□□□□ -0.56
SHCBP1-201ENST00000303383 OR7C2O60412 319 aa11.54□□□□□ -0.56
SHCBP1-201ENST00000303383 OR5G3P0C626 314 aa11.54□□□□□ -0.56
SHCBP1-201ENST00000303383 STAG3L2P0CL84 134 aa11.54□□□□□ -0.56
SHCBP1-201ENST00000303383 STAG3L3P0CL85 134 aa11.54□□□□□ -0.56
SHCBP1-201ENST00000303383 EBI3Q14213 229 aa11.54□□□□□ -0.56
SHCBP1-201ENST00000303383 FAM74A3Q4VXF1 159 aa11.54□□□□□ -0.56
SHCBP1-201ENST00000303383 GATAD1Q8WUU5 269 aa11.54□□□□□ -0.56
SHCBP1-201ENST00000303383 C19orf24Q9BVV8 132 aa11.54□□□□□ -0.56
SHCBP1-201ENST00000303383 CRYBG3Q68DQ2 2970 aa11.53□□□□□ -0.56
SHCBP1-201ENST00000303383 OR1L4Q8NGR5 311 aa11.53□□□□□ -0.56
SHCBP1-201ENST00000303383 OR4X1Q8NH49 305 aa11.53□□□□□ -0.56
SHCBP1-201ENST00000303383 PFDN5Q99471 154 aa11.53□□□□□ -0.56
SHCBP1-201ENST00000303383 TECRQ9NZ01 308 aaKnown RBP11.53□□□□□ -0.56
SHCBP1-201ENST00000303383 FUT9Q9Y231 359 aa11.53□□□□□ -0.56
SHCBP1-201ENST00000303383 C11orf94C9JXX5 98 aa11.53□□□□□ -0.56
SHCBP1-201ENST00000303383 H3BQ15 152 aa11.53□□□□□ -0.56
SHCBP1-201ENST00000303383 AKR1C3P42330 323 aa11.53□□□□□ -0.56
SHCBP1-201ENST00000303383 MFAP2P55001 183 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms