RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 CD177Q8N6Q3 437 aa8.88□□□□□ -0.99
ZNF558-201ENST00000301475 OR9G1Q8NH87 305 aa8.88□□□□□ -0.99
ZNF558-201ENST00000301475 SARAFQ96BY9 339 aa8.88□□□□□ -0.99
ZNF558-201ENST00000301475 GRAMD2BQ96HH9 432 aa8.88□□□□□ -0.99
ZNF558-201ENST00000301475 FAM167A-AS1Q96KT0 104 aa8.88□□□□□ -0.99
ZNF558-201ENST00000301475 TRIB1Q96RU8 372 aa8.88□□□□□ -0.99
ZNF558-201ENST00000301475 SLC25A33Q9BSK2 321 aa8.88□□□□□ -0.99
ZNF558-201ENST00000301475 C1RLQ9NZP8 487 aa8.88□□□□□ -0.99
ZNF558-201ENST00000301475 TOX4O94842 621 aa8.87□□□□□ -0.99
ZNF558-201ENST00000301475 UBE2L3P68036 154 aaKnown RBP8.87□□□□□ -0.99
ZNF558-201ENST00000301475 MLANAQ16655 118 aa8.87□□□□□ -0.99
ZNF558-201ENST00000301475 CORO2AQ92828 525 aa8.87□□□□□ -0.99
ZNF558-201ENST00000301475 LEAP2Q969E1 77 aa8.87□□□□□ -0.99
ZNF558-201ENST00000301475 SCRT2Q9NQ03 307 aa8.87□□□□□ -0.99
ZNF558-201ENST00000301475 IDI2-AS1Q9NZ38 188 aa8.87□□□□□ -0.99
ZNF558-201ENST00000301475 FOXA2Q9Y261 457 aaPredicted RBP8.87□□□□□ -0.99
ZNF558-201ENST00000301475 MED13Q9UHV7 2174 aa8.87□□□□□ -0.99
ZNF558-201ENST00000301475 TMEM238C9JI98 176 aa8.87□□□□□ -0.99
ZNF558-201ENST00000301475 C8orf88P0DMB2 117 aa8.87□□□□□ -0.99
ZNF558-201ENST00000301475 NANOS1Q8WY41 292 aaKnown RBP8.87□□□□□ -0.99
ZNF558-201ENST00000301475 SLC25A2Q9BXI2 301 aa8.87□□□□□ -0.99
ZNF558-201ENST00000301475 C7orf69Q9H7B7 122 aa8.87□□□□□ -0.99
ZNF558-201ENST00000301475 ARFGEF3Q5TH69 2177 aa8.87□□□□□ -0.99
ZNF558-201ENST00000301475 CER1O95813 267 aa8.86□□□□□ -0.99
ZNF558-201ENST00000301475 PYYP10082 97 aa8.86□□□□□ -0.99
ZNF558-201ENST00000301475 TAS2R45P59539 299 aa8.86□□□□□ -0.99
ZNF558-201ENST00000301475 C12orf54Q6X4T0 127 aa8.86□□□□□ -0.99
ZNF558-201ENST00000301475 KLF14Q8TD94 323 aaPredicted RBP8.86□□□□□ -0.99
ZNF558-201ENST00000301475 MEGF9Q9H1U4 602 aa8.86□□□□□ -0.99
ZNF558-201ENST00000301475 ARRDC1-AS1Q9H2J1 176 aa8.86□□□□□ -0.99
ZNF558-201ENST00000301475 LOXL3P58215 753 aa8.86□□□□□ -0.99
ZNF558-201ENST00000301475 FAM71F2Q6NXP2 309 aa8.86□□□□□ -0.99
ZNF558-201ENST00000301475 SSX8Q7RTT4 187 aa8.86□□□□□ -0.99
ZNF558-201ENST00000301475 OR4S2Q8NH73 311 aa8.86□□□□□ -0.99
ZNF558-201ENST00000301475 FAM173AQ9BQD7 235 aa8.86□□□□□ -0.99
ZNF558-201ENST00000301475 TTTY12Q9BZ98 90 aa8.86□□□□□ -0.99
ZNF558-201ENST00000301475 ENY2Q9NPA8 101 aa8.86□□□□□ -0.99
ZNF558-201ENST00000301475 JPT1Q9UK76 154 aa8.86□□□□□ -0.99
ZNF558-201ENST00000301475 AMMECR1Q9Y4X0 333 aaPredicted RBP8.86□□□□□ -0.99
ZNF558-201ENST00000301475 PSMB11A5LHX3 300 aa8.86□□□□□ -0.99
ZNF558-201ENST00000301475 FNDC10F2Z333 226 aa8.86□□□□□ -0.99
ZNF558-201ENST00000301475 J3QW42 95 aa8.86□□□□□ -0.99
ZNF558-201ENST00000301475 K7ERU9 68 aa8.86□□□□□ -0.99
ZNF558-201ENST00000301475 LEPROTL1O95214 131 aa8.86□□□□□ -0.99
ZNF558-201ENST00000301475 RIPPLY3P57055 190 aa8.86□□□□□ -0.99
ZNF558-201ENST00000301475 TCF24Q7RTU0 167 aa8.86□□□□□ -0.99
ZNF558-201ENST00000301475 KLF13Q9Y2Y9 288 aaPredicted RBP8.86□□□□□ -0.99
ZNF558-201ENST00000301475 SELENOKQ9Y6D0 94 aa8.86□□□□□ -0.99
ZNF558-201ENST00000301475 OTOGLQ3ZCN5 2332 aa8.85□□□□□ -0.99
ZNF558-201ENST00000301475 DYSFO75923 2080 aa8.85□□□□□ -0.99
ZNF558-201ENST00000301475 J3QR06 171 aa8.85□□□□□ -0.99
ZNF558-201ENST00000301475 M0R296 226 aa8.85□□□□□ -0.99
ZNF558-201ENST00000301475 PEX7O00628 323 aa8.85□□□□□ -0.99
ZNF558-201ENST00000301475 CD5LO43866 347 aa8.85□□□□□ -0.99
ZNF558-201ENST00000301475 TMEM251Q8N6I4 163 aa8.85□□□□□ -0.99
ZNF558-201ENST00000301475 FZR1Q9UM11 496 aa8.85□□□□□ -0.99
ZNF558-201ENST00000301475 MUC6Q6W4X9 2439 aa8.85□□□□□ -0.99
ZNF558-201ENST00000301475 IGLC1P0CG04 106 aa8.85□□□□□ -0.99
ZNF558-201ENST00000301475 GNG5P63218 68 aa8.85□□□□□ -0.99
ZNF558-201ENST00000301475 RTL8BQ17RB0 113 aa8.85□□□□□ -0.99
ZNF558-201ENST00000301475 SMIM21Q3B7S5 101 aa8.85□□□□□ -0.99
ZNF558-201ENST00000301475 SGK494Q96LW2 274 aa8.85□□□□□ -0.99
ZNF558-201ENST00000301475 PMCHL2Q9BQD1 86 aa8.85□□□□□ -0.99
ZNF558-201ENST00000301475 B4GALT7Q9UBV7 327 aa8.85□□□□□ -0.99
ZNF558-201ENST00000301475 OR51B2Q9Y5P1 312 aa8.85□□□□□ -0.99
ZNF558-201ENST00000301475 SPENQ96T58 3664 aaKnown RBP8.85□□□□□ -0.99
ZNF558-201ENST00000301475 HLA-DRB1P01911 266 aa8.84□□□□□ -0.99
ZNF558-201ENST00000301475 C2orf91Q6ZV80 131 aa8.84□□□□□ -0.99
ZNF558-201ENST00000301475 ZNF329Q86UD4 541 aa8.84□□□□□ -0.99
ZNF558-201ENST00000301475 DSCAML1Q8TD84 2053 aa8.84□□□□□ -0.99
ZNF558-201ENST00000301475 H0Y8G0 127 aa8.84□□□□□ -0.99
ZNF558-201ENST00000301475 SAA2P0DJI9 122 aaPredicted RBP8.84□□□□□ -0.99
ZNF558-201ENST00000301475 REG1BP48304 166 aa8.84□□□□□ -0.99
ZNF558-201ENST00000301475 HIST1H1AQ02539 215 aaPredicted RBP8.84□□□□□ -0.99
ZNF558-201ENST00000301475 ATP5L2Q7Z4Y8 100 aa8.84□□□□□ -0.99
ZNF558-201ENST00000301475 TMEM191AQ9H0A3 160 aa8.84□□□□□ -0.99
ZNF558-201ENST00000301475 CEP250Q9BV73 2442 aa8.84□□□□□ -1
ZNF558-201ENST00000301475 KIR2DS2P43631 304 aa8.83□□□□□ -1
ZNF558-201ENST00000301475 HBBP68871 147 aa8.83□□□□□ -1
ZNF558-201ENST00000301475 SSBP2P81877 361 aaPredicted RBP8.83□□□□□ -1
ZNF558-201ENST00000301475 MRPL49Q13405 166 aaKnown RBP8.83□□□□□ -1
ZNF558-201ENST00000301475 LINC00322Q6ZN03 302 aaPredicted RBP8.83□□□□□ -1
ZNF558-201ENST00000301475 CXXC4Q9H2H0 198 aa8.83□□□□□ -1
ZNF558-201ENST00000301475 PEF1Q9UBV8 284 aaKnown RBP8.83□□□□□ -1
ZNF558-201ENST00000301475 IGKV1D-17A0A075B6S4 117 aa8.83□□□□□ -1
ZNF558-201ENST00000301475 C7orf71A4D174 169 aa8.83□□□□□ -1
ZNF558-201ENST00000301475 HIST1H1EP10412 219 aaKnown RBP8.83□□□□□ -1
ZNF558-201ENST00000301475 PRDX2P32119 198 aa8.83□□□□□ -1
ZNF558-201ENST00000301475 ZNF138P52744 262 aa8.83□□□□□ -1
ZNF558-201ENST00000301475 VWA1Q6PCB0 445 aa8.83□□□□□ -1
ZNF558-201ENST00000301475 LRRC29Q8WV35 223 aa8.83□□□□□ -1
ZNF558-201ENST00000301475 GTSF1Q8WW33 167 aa8.83□□□□□ -1
ZNF558-201ENST00000301475 SMIM12Q96EX1 92 aa8.83□□□□□ -1
ZNF558-201ENST00000301475 DCHS1Q96JQ0 3298 aa8.83□□□□□ -1
ZNF558-201ENST00000301475 CACNA1GO43497 2377 aa8.83□□□□□ -1
ZNF558-201ENST00000301475 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.83□□□□□ -1
ZNF558-201ENST00000301475 HSBP1L1C9JCN9 74 aa8.83□□□□□ -1
ZNF558-201ENST00000301475 NTN3O00634 580 aaPredicted RBP8.83□□□□□ -1
ZNF558-201ENST00000301475 SNAI2O43623 268 aa8.83□□□□□ -1
ZNF558-201ENST00000301475 LYZL6O75951 148 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms