RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 ZNF146Q15072 292 aa9.75□□□□□ -0.85
SNIP1-201ENST00000296215 TMEM52Q8NDY8 209 aa9.75□□□□□ -0.85
SNIP1-201ENST00000296215 RFESDQ8TAC1 157 aa9.75□□□□□ -0.85
SNIP1-201ENST00000296215 LINC00479Q96M42 142 aa9.75□□□□□ -0.85
SNIP1-201ENST00000296215 APOOQ9BUR5 198 aa9.75□□□□□ -0.85
SNIP1-201ENST00000296215 C1RLQ9NZP8 487 aa9.75□□□□□ -0.85
SNIP1-201ENST00000296215 LYZL6O75951 148 aa9.75□□□□□ -0.85
SNIP1-201ENST00000296215 P2RY2P41231 377 aa9.75□□□□□ -0.85
SNIP1-201ENST00000296215 C8orf44Q96CB5 159 aa9.75□□□□□ -0.85
SNIP1-201ENST00000296215 LOXL2Q9Y4K0 774 aa9.75□□□□□ -0.85
SNIP1-201ENST00000296215 TINCRA0A1B0GVN0 87 aa9.75□□□□□ -0.85
SNIP1-201ENST00000296215 PLAUP00749 431 aa9.75□□□□□ -0.85
SNIP1-201ENST00000296215 GRPP07492 148 aa9.75□□□□□ -0.85
SNIP1-201ENST00000296215 DEFB126Q9BYW3 111 aa9.75□□□□□ -0.85
SNIP1-201ENST00000296215 K7ESM1 405 aa9.75□□□□□ -0.85
SNIP1-201ENST00000296215 NPYP01303 97 aa9.75□□□□□ -0.85
SNIP1-201ENST00000296215 IL11P20809 199 aa9.75□□□□□ -0.85
SNIP1-201ENST00000296215 FAM60AQ9NP50 221 aa9.75□□□□□ -0.85
SNIP1-201ENST00000296215 THAP10Q9P2Z0 257 aaPredicted RBP9.75□□□□□ -0.85
SNIP1-201ENST00000296215 MPC1Q9Y5U8 109 aa9.75□□□□□ -0.85
SNIP1-201ENST00000296215 MPDZO75970 2070 aa9.74□□□□□ -0.85
SNIP1-201ENST00000296215 BCORQ6W2J9 1755 aa9.74□□□□□ -0.85
SNIP1-201ENST00000296215 IGHV3-64DA0A0J9YX35 117 aa9.74□□□□□ -0.85
SNIP1-201ENST00000296215 MYMXA0A1B0GTQ4 84 aa9.74□□□□□ -0.85
SNIP1-201ENST00000296215 CCL16O15467 120 aa9.74□□□□□ -0.85
SNIP1-201ENST00000296215 CD3EP07766 207 aa9.74□□□□□ -0.85
SNIP1-201ENST00000296215 COL9A1P20849 921 aa9.74□□□□□ -0.85
SNIP1-201ENST00000296215 K7EN84 100 aa9.74□□□□□ -0.85
SNIP1-201ENST00000296215 IGLV3-27P01718 113 aa9.74□□□□□ -0.85
SNIP1-201ENST00000296215 ADAMTSL4Q6UY14 1074 aa9.74□□□□□ -0.85
SNIP1-201ENST00000296215 LINC00173Q6ZV60 143 aa9.74□□□□□ -0.85
SNIP1-201ENST00000296215 TIMM8AO60220 97 aaPredicted RBP9.74□□□□□ -0.85
SNIP1-201ENST00000296215 NPC2P61916 151 aa9.74□□□□□ -0.85
SNIP1-201ENST00000296215 RBM3P98179 157 aaKnown RBP9.74□□□□□ -0.85
SNIP1-201ENST00000296215 GTSF1Q8WW33 167 aa9.74□□□□□ -0.85
SNIP1-201ENST00000296215 RETNQ9HD89 108 aa9.74□□□□□ -0.85
SNIP1-201ENST00000296215 ZNF581Q9P0T4 197 aa9.74□□□□□ -0.85
SNIP1-201ENST00000296215 WDR83OSQ9Y284 106 aa9.74□□□□□ -0.85
SNIP1-201ENST00000296215 CACNA1SQ13698 1873 aa9.74□□□□□ -0.85
SNIP1-201ENST00000296215 H7C1H1 209 aa9.73□□□□□ -0.85
SNIP1-201ENST00000296215 RHODO00212 210 aa9.73□□□□□ -0.85
SNIP1-201ENST00000296215 CT62P0C5K7 136 aa9.73□□□□□ -0.85
SNIP1-201ENST00000296215 LINC01559Q495D7 138 aa9.73□□□□□ -0.85
SNIP1-201ENST00000296215 ABHD12Q8N2K0 398 aa9.73□□□□□ -0.85
SNIP1-201ENST00000296215 ST8SIA1Q92185 356 aa9.73□□□□□ -0.85
SNIP1-201ENST00000296215 C20orf173Q96LM9 149 aa9.73□□□□□ -0.85
SNIP1-201ENST00000296215 ZNF488Q96MN9 340 aa9.73□□□□□ -0.85
SNIP1-201ENST00000296215 DYNLRB1Q9NP97 96 aa9.73□□□□□ -0.85
SNIP1-201ENST00000296215 SCN5AQ14524 2016 aa9.73□□□□□ -0.85
SNIP1-201ENST00000296215 TRBV20OR9-2A0A075B6H5 130 aa9.73□□□□□ -0.85
SNIP1-201ENST00000296215 CD7P09564 240 aa9.73□□□□□ -0.85
SNIP1-201ENST00000296215 CYYR1Q96J86 154 aa9.73□□□□□ -0.85
SNIP1-201ENST00000296215 HES7Q9BYE0 225 aa9.73□□□□□ -0.85
SNIP1-201ENST00000296215 HEATR1Q9H583 2144 aaKnown RBP9.73□□□□□ -0.85
SNIP1-201ENST00000296215 SCN2AQ99250 2005 aa9.73□□□□□ -0.85
SNIP1-201ENST00000296215 YLPM1P49750 1951 aaKnown RBP9.73□□□□□ -0.85
SNIP1-201ENST00000296215 MGST3O14880 152 aa9.73□□□□□ -0.85
SNIP1-201ENST00000296215 INSL3P51460 131 aa9.73□□□□□ -0.85
SNIP1-201ENST00000296215 TMEM258P61165 79 aa9.73□□□□□ -0.85
SNIP1-201ENST00000296215 PSG7Q13046 419 aa9.73□□□□□ -0.85
SNIP1-201ENST00000296215 SCGB3A1Q96QR1 104 aa9.73□□□□□ -0.85
SNIP1-201ENST00000296215 Q6ZSR6 202 aa9.73□□□□□ -0.85
SNIP1-201ENST00000296215 LIME1Q9H400 295 aa9.73□□□□□ -0.85
SNIP1-201ENST00000296215 CAMTA1Q9Y6Y1 1673 aa9.72□□□□□ -0.85
SNIP1-201ENST00000296215 CLDN14O95500 239 aa9.72□□□□□ -0.85
SNIP1-201ENST00000296215 SSR4P51571 173 aa9.72□□□□□ -0.85
SNIP1-201ENST00000296215 LY75O60449 1722 aa9.72□□□□□ -0.85
SNIP1-201ENST00000296215 IGHV3-43A0A0B4J1X8 118 aa9.72□□□□□ -0.85
SNIP1-201ENST00000296215 ATOX1O00244 68 aa9.72□□□□□ -0.85
SNIP1-201ENST00000296215 IGHV3-43DP0DP04 118 aa9.72□□□□□ -0.85
SNIP1-201ENST00000296215 LOXL3P58215 753 aa9.72□□□□□ -0.85
SNIP1-201ENST00000296215 KLF5Q13887 457 aaPredicted RBP9.72□□□□□ -0.85
SNIP1-201ENST00000296215 EFNB3Q15768 340 aa9.72□□□□□ -0.85
SNIP1-201ENST00000296215 C3orf22Q8N5N4 141 aa9.72□□□□□ -0.85
SNIP1-201ENST00000296215 C8orf46Q8TAG6 207 aa9.72□□□□□ -0.85
SNIP1-201ENST00000296215 GLI3P10071 1580 aa9.72□□□□□ -0.85
SNIP1-201ENST00000296215 SCN11AQ9UI33 1791 aa9.72□□□□□ -0.85
SNIP1-201ENST00000296215 LINC01545Q5VT33 79 aa9.72□□□□□ -0.85
SNIP1-201ENST00000296215 MRPL32Q9BYC8 188 aaKnown RBP9.72□□□□□ -0.85
SNIP1-201ENST00000296215 LOC107984640A0A0U1RRK4 108 aa9.71□□□□□ -0.85
SNIP1-201ENST00000296215 WIPF3A6NGB9 483 aa9.71□□□□□ -0.85
SNIP1-201ENST00000296215 B4GALT1P15291 398 aa9.71□□□□□ -0.85
SNIP1-201ENST00000296215 SCN7AQ01118 1682 aa9.71□□□□□ -0.85
SNIP1-201ENST00000296215 C2CD4DB7Z1M9 353 aa9.71□□□□□ -0.85
SNIP1-201ENST00000296215 K7EMI3 77 aa9.71□□□□□ -0.85
SNIP1-201ENST00000296215 LGALS1P09382 135 aaKnown RBP9.71□□□□□ -0.85
SNIP1-201ENST00000296215 IFI27P40305 119 aaPredicted RBP9.71□□□□□ -0.85
SNIP1-201ENST00000296215 FAM53BQ14153 422 aa9.71□□□□□ -0.85
SNIP1-201ENST00000296215 TDHQ8IZJ6 230 aa9.71□□□□□ -0.85
SNIP1-201ENST00000296215 ZNF747Q9BV97 191 aa9.71□□□□□ -0.85
SNIP1-201ENST00000296215 ABCA3Q99758 1704 aa9.71□□□□□ -0.85
SNIP1-201ENST00000296215 C2orf70A6NJV1 201 aa9.71□□□□□ -0.86
SNIP1-201ENST00000296215 IGKV1D-33P01593 117 aa9.71□□□□□ -0.86
SNIP1-201ENST00000296215 IGKV1-33P01594 117 aa9.71□□□□□ -0.86
SNIP1-201ENST00000296215 SIGLEC15Q6ZMC9 328 aa9.71□□□□□ -0.86
SNIP1-201ENST00000296215 BADQ92934 168 aa9.71□□□□□ -0.86
SNIP1-201ENST00000296215 TOGARAM1Q9Y4F4 1720 aa9.71□□□□□ -0.86
SNIP1-201ENST00000296215 IGLC6P0CF74 106 aa9.71□□□□□ -0.86
SNIP1-201ENST00000296215 CFPP27918 469 aa9.71□□□□□ -0.86
SNIP1-201ENST00000296215 LYZP61626 148 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms