RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 SLC50A1Q9BRV3 221 aa14.65□□□□□ -0.06
CDC42EP3-201ENST00000295324 EGR1P18146 543 aa14.65□□□□□ -0.06
CDC42EP3-201ENST00000295324 GATA3P23771 443 aa14.65□□□□□ -0.06
CDC42EP3-201ENST00000295324 BRD3OSQ6XYD6 125 aa14.65□□□□□ -0.06
CDC42EP3-201ENST00000295324 TBL2Q9Y4P3 447 aaKnown RBP14.65□□□□□ -0.06
CDC42EP3-201ENST00000295324 PCNX1Q96RV3 2341 aa14.64□□□□□ -0.07
CDC42EP3-201ENST00000295324 ZNF324O75467 553 aaPredicted RBP14.64□□□□□ -0.07
CDC42EP3-201ENST00000295324 COX6CP09669 75 aa14.64□□□□□ -0.07
CDC42EP3-201ENST00000295324 HGFACQ04756 655 aa14.64□□□□□ -0.07
CDC42EP3-201ENST00000295324 TFF3Q07654 80 aa14.64□□□□□ -0.07
CDC42EP3-201ENST00000295324 KLRD1Q13241 179 aa14.64□□□□□ -0.07
CDC42EP3-201ENST00000295324 C3orf36Q3SXR2 165 aa14.64□□□□□ -0.07
CDC42EP3-201ENST00000295324 RNF125Q96EQ8 232 aa14.64□□□□□ -0.07
CDC42EP3-201ENST00000295324 IGHV1-3A0A0C4DH29 117 aa14.64□□□□□ -0.07
CDC42EP3-201ENST00000295324 ASIPP42127 132 aa14.64□□□□□ -0.07
CDC42EP3-201ENST00000295324 SDHCQ99643 169 aaPredicted RBP14.64□□□□□ -0.07
CDC42EP3-201ENST00000295324 ZNF257Q9Y2Q1 563 aa14.64□□□□□ -0.07
CDC42EP3-201ENST00000295324 RAMP3O60896 148 aa14.64□□□□□ -0.07
CDC42EP3-201ENST00000295324 HINT1P49773 126 aaPredicted RBP14.64□□□□□ -0.07
CDC42EP3-201ENST00000295324 SPATA45Q537H7 98 aa14.64□□□□□ -0.07
CDC42EP3-201ENST00000295324 GAFA1Q96PS6 74 aa14.64□□□□□ -0.07
CDC42EP3-201ENST00000295324 HSPB9Q9BQS6 159 aa14.64□□□□□ -0.07
CDC42EP3-201ENST00000295324 A0A0A6YYD4 124 aa14.64□□□□□ -0.07
CDC42EP3-201ENST00000295324 MDKP21741 143 aaPredicted RBP14.64□□□□□ -0.07
CDC42EP3-201ENST00000295324 KIR2DL4Q99706 377 aa14.64□□□□□ -0.07
CDC42EP3-201ENST00000295324 PARLQ9H300 379 aa14.64□□□□□ -0.07
CDC42EP3-201ENST00000295324 GTSCR1Q86UQ5 136 aa14.63□□□□□ -0.07
CDC42EP3-201ENST00000295324 RPRMLQ8N4K4 120 aa14.63□□□□□ -0.07
CDC42EP3-201ENST00000295324 LINC00527Q9UJ94 153 aa14.63□□□□□ -0.07
CDC42EP3-201ENST00000295324 ZNF407Q9C0G0 2248 aa14.63□□□□□ -0.07
CDC42EP3-201ENST00000295324 LOC107984156A0A0G2JMH3 177 aa14.63□□□□□ -0.07
CDC42EP3-201ENST00000295324 H7C2G1 150 aa14.63□□□□□ -0.07
CDC42EP3-201ENST00000295324 TMEM219Q86XT9 240 aa14.63□□□□□ -0.07
CDC42EP3-201ENST00000295324 ARL17AQ8IVW1 177 aa14.63□□□□□ -0.07
CDC42EP3-201ENST00000295324 DUSP14O95147 198 aaKnown RBP14.63□□□□□ -0.07
CDC42EP3-201ENST00000295324 Q5PR19 223 aa14.63□□□□□ -0.07
CDC42EP3-201ENST00000295324 MARVELD3Q96A59 401 aa14.63□□□□□ -0.07
CDC42EP3-201ENST00000295324 RNF223E7ERA6 249 aa14.63□□□□□ -0.07
CDC42EP3-201ENST00000295324 TMEM167AQ8TBQ9 72 aa14.63□□□□□ -0.07
CDC42EP3-201ENST00000295324 TMEM262E9PQX1 116 aa14.63□□□□□ -0.07
CDC42EP3-201ENST00000295324 LY6HO94772 140 aa14.63□□□□□ -0.07
CDC42EP3-201ENST00000295324 CGAP01215 116 aa14.63□□□□□ -0.07
CDC42EP3-201ENST00000295324 TAS2R60P59551 318 aa14.63□□□□□ -0.07
CDC42EP3-201ENST00000295324 CENPWQ5EE01 88 aa14.63□□□□□ -0.07
CDC42EP3-201ENST00000295324 C18orf12Q96KH6 178 aa14.63□□□□□ -0.07
CDC42EP3-201ENST00000295324 NUDT3O95989 172 aa14.62□□□□□ -0.07
CDC42EP3-201ENST00000295324 MLNRO43193 412 aa14.62□□□□□ -0.07
CDC42EP3-201ENST00000295324 PAX8Q06710 450 aa14.62□□□□□ -0.07
CDC42EP3-201ENST00000295324 PAX1P15863 534 aa14.62□□□□□ -0.07
CDC42EP3-201ENST00000295324 PRSS8Q16651 343 aa14.62□□□□□ -0.07
CDC42EP3-201ENST00000295324 Q5BKY6 102 aa14.62□□□□□ -0.07
CDC42EP3-201ENST00000295324 OR11H4Q8NGC9 324 aa14.62□□□□□ -0.07
CDC42EP3-201ENST00000295324 HTN3P15516 51 aa14.62□□□□□ -0.07
CDC42EP3-201ENST00000295324 AGAP20933 346 aa14.62□□□□□ -0.07
CDC42EP3-201ENST00000295324 PAPPA-AS1Q5QFB9 102 aa14.61□□□□□ -0.07
CDC42EP3-201ENST00000295324 CMC4P56277 68 aaPredicted RBP14.61□□□□□ -0.07
CDC42EP3-201ENST00000295324 SLC25A48Q6ZT89 311 aaKnown RBP14.61□□□□□ -0.07
CDC42EP3-201ENST00000295324 RARRES2Q99969 163 aa14.61□□□□□ -0.07
CDC42EP3-201ENST00000295324 LILRA1O75019 489 aa14.61□□□□□ -0.07
CDC42EP3-201ENST00000295324 GATA2P23769 480 aaPredicted RBP14.61□□□□□ -0.07
CDC42EP3-201ENST00000295324 FHITP49789 147 aa14.61□□□□□ -0.07
CDC42EP3-201ENST00000295324 PROK2Q9HC23 129 aa14.61□□□□□ -0.07
CDC42EP3-201ENST00000295324 PEX7O00628 323 aa14.61□□□□□ -0.07
CDC42EP3-201ENST00000295324 MPZP25189 248 aa14.61□□□□□ -0.07
CDC42EP3-201ENST00000295324 EMP1P54849 157 aa14.61□□□□□ -0.07
CDC42EP3-201ENST00000295324 MSMBP08118 114 aa14.61□□□□□ -0.07
CDC42EP3-201ENST00000295324 DNLZQ5SXM8 178 aa14.61□□□□□ -0.07
CDC42EP3-201ENST00000295324 IGF2-ASQ6U949 168 aa14.61□□□□□ -0.07
CDC42EP3-201ENST00000295324 ARL6IP6Q8N6S5 226 aa14.61□□□□□ -0.07
CDC42EP3-201ENST00000295324 TRGV2A0A075B6R0 118 aa14.6□□□□□ -0.07
CDC42EP3-201ENST00000295324 IGKV1D-8A0A087WSZ0 117 aa14.6□□□□□ -0.07
CDC42EP3-201ENST00000295324 TNFSF13O75888 250 aa14.6□□□□□ -0.07
CDC42EP3-201ENST00000295324 PRTN3P24158 256 aa14.6□□□□□ -0.07
CDC42EP3-201ENST00000295324 C12orf54Q6X4T0 127 aa14.6□□□□□ -0.07
CDC42EP3-201ENST00000295324 PARD6GQ9BYG4 376 aaPredicted RBP14.6□□□□□ -0.07
CDC42EP3-201ENST00000295324 NAPSAO96009 420 aa14.6□□□□□ -0.07
CDC42EP3-201ENST00000295324 OR1P1Q8NH06 330 aa14.6□□□□□ -0.07
CDC42EP3-201ENST00000295324 TSC2P49815 1807 aa14.6□□□□□ -0.07
CDC42EP3-201ENST00000295324 GFI1Q99684 422 aa14.6□□□□□ -0.07
CDC42EP3-201ENST00000295324 F8VVB4 439 aa14.59□□□□□ -0.07
CDC42EP3-201ENST00000295324 F8VWA3 439 aa14.59□□□□□ -0.07
CDC42EP3-201ENST00000295324 TNFRSF18Q9Y5U5 241 aa14.59□□□□□ -0.07
CDC42EP3-201ENST00000295324 FAM208BQ5VWN6 2430 aa14.59□□□□□ -0.07
CDC42EP3-201ENST00000295324 IGKV1D-17A0A075B6S4 117 aa14.59□□□□□ -0.07
CDC42EP3-201ENST00000295324 TRGC2P03986 189 aa14.59□□□□□ -0.07
CDC42EP3-201ENST00000295324 LEMD1Q68G75 181 aa14.59□□□□□ -0.07
CDC42EP3-201ENST00000295324 NEU1Q99519 415 aa14.59□□□□□ -0.07
CDC42EP3-201ENST00000295324 C5orf63A6NC05 138 aa14.59□□□□□ -0.07
CDC42EP3-201ENST00000295324 M0R381 172 aa14.59□□□□□ -0.07
CDC42EP3-201ENST00000295324 C3orf56Q8N813 242 aa14.59□□□□□ -0.07
CDC42EP3-201ENST00000295324 BUB1B-PAK6H3BSN5 160 aa14.59□□□□□ -0.07
CDC42EP3-201ENST00000295324 VENTXO95231 258 aa14.59□□□□□ -0.07
CDC42EP3-201ENST00000295324 PPP1R17O96001 155 aa14.59□□□□□ -0.07
CDC42EP3-201ENST00000295324 PMCHL1Q16048 86 aa14.59□□□□□ -0.07
CDC42EP3-201ENST00000295324 C5orf64Q2M2E5 130 aa14.59□□□□□ -0.07
CDC42EP3-201ENST00000295324 MIR17HGQ75NE6 70 aa14.59□□□□□ -0.07
CDC42EP3-201ENST00000295324 IGKV3OR2-268A0A0C4DH90 116 aa14.58□□□□□ -0.07
CDC42EP3-201ENST00000295324 MPTX1A8MV57 137 aa14.58□□□□□ -0.07
CDC42EP3-201ENST00000295324 FMC1Q96HJ9 113 aa14.58□□□□□ -0.07
CDC42EP3-201ENST00000295324 CIARTQ8N365 385 aaPredicted RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms