RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 C22orf15Q8WYQ4 148 aa7.31□□□□□ -1.24
PDPN-201ENST00000294489 FAM168AQ92567 244 aa7.31□□□□□ -1.24
PDPN-201ENST00000294489 TBX15Q96SF7 602 aa7.31□□□□□ -1.24
PDPN-201ENST00000294489 C1orf196B1AJZ1 125 aa7.31□□□□□ -1.24
PDPN-201ENST00000294489 RAB5AP20339 215 aa7.31□□□□□ -1.24
PDPN-201ENST00000294489 RAB5BP61020 215 aa7.31□□□□□ -1.24
PDPN-201ENST00000294489 NPIPB3Q92617 1050 aa7.31□□□□□ -1.24
PDPN-201ENST00000294489 FNDC4Q9H6D8 234 aaPredicted RBP7.31□□□□□ -1.24
PDPN-201ENST00000294489 TMEM242Q9NWH2 141 aa7.31□□□□□ -1.24
PDPN-201ENST00000294489 TECRQ9NZ01 308 aaKnown RBP7.31□□□□□ -1.24
PDPN-201ENST00000294489 USP9XQ93008 2570 aaPredicted RBP7.31□□□□□ -1.24
PDPN-201ENST00000294489 MOSP00540 346 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 GATA2P23769 480 aaPredicted RBP7.3□□□□□ -1.24
PDPN-201ENST00000294489 SELENOTP62341 195 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 PAX8Q06710 450 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 EBI3Q14213 229 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 ADIRFQ15847 76 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 SPATA31B1PQ5VZV4 182 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 NPBQ8NG41 125 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 OR1P1Q8NH06 330 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 MISP3Q96FF7 219 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 RNF2Q99496 336 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 TBL2Q9Y4P3 447 aaKnown RBP7.3□□□□□ -1.24
PDPN-201ENST00000294489 CLDN34H7C241 214 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 CNIH1O95406 144 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 AREGP15514 252 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 ATP5G3P48201 142 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 UBE2E1P51965 193 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 LCN2P80188 198 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 PQLC2Q6ZP29 291 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 LHFPL4Q7Z7J7 247 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 SRSF12Q8WXF0 261 aaKnown RBP7.3□□□□□ -1.24
PDPN-201ENST00000294489 SRSF8Q9BRL6 282 aaKnown RBP7.3□□□□□ -1.24
PDPN-201ENST00000294489 CTDSP1Q9GZU7 261 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 TMEM167BQ9NRX6 74 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 ARHGAP32A7KAX9 2087 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 A0A1W2PRD5 423 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 A0A1W2PRF3 423 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 A0A1W2PRM7 423 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 TCRBV4S1A1TA0A5B7 111 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 NBR2O15453 112 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 OR5G3P0C626 314 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 HES1Q14469 280 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 SSX2Q16385 188 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 FAM209BQ5JX69 171 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 MIR17HGQ75NE6 70 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 Q8N6K4 173 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 PFDN5Q99471 154 aa7.3□□□□□ -1.24
PDPN-201ENST00000294489 MRPL32Q9BYC8 188 aaKnown RBP7.3□□□□□ -1.24
PDPN-201ENST00000294489 IGHV4-61A0A0C4DH41 118 aa7.29□□□□□ -1.24
PDPN-201ENST00000294489 NDUFA3O95167 84 aa7.29□□□□□ -1.24
PDPN-201ENST00000294489 APELAP0DMC3 54 aa7.29□□□□□ -1.24
PDPN-201ENST00000294489 RND2P52198 227 aa7.29□□□□□ -1.24
PDPN-201ENST00000294489 THAP8Q8NA92 274 aa7.29□□□□□ -1.24
PDPN-201ENST00000294489 OR1L4Q8NGR5 311 aa7.29□□□□□ -1.24
PDPN-201ENST00000294489 OR2T10Q8NGZ9 312 aa7.29□□□□□ -1.24
PDPN-201ENST00000294489 DNAJC4Q9NNZ3 241 aa7.29□□□□□ -1.24
PDPN-201ENST00000294489 F11RQ9Y624 299 aaKnown RBP7.29□□□□□ -1.24
PDPN-201ENST00000294489 URGCP-MRPS24S4R325 110 aa7.29□□□□□ -1.24
PDPN-201ENST00000294489 A0A096LNT2 108 aa7.29□□□□□ -1.24
PDPN-201ENST00000294489 TEX22C9J3V5 150 aa7.29□□□□□ -1.24
PDPN-201ENST00000294489 TOX4O94842 621 aa7.29□□□□□ -1.24
PDPN-201ENST00000294489 ATP5J2P56134 94 aa7.29□□□□□ -1.24
PDPN-201ENST00000294489 RPL23P62829 140 aaKnown RBP7.29□□□□□ -1.24
PDPN-201ENST00000294489 SSBP2P81877 361 aaPredicted RBP7.29□□□□□ -1.24
PDPN-201ENST00000294489 KIAA0141Q14154 515 aaPredicted RBP7.29□□□□□ -1.24
PDPN-201ENST00000294489 CLEC2AQ6UVW9 174 aa7.29□□□□□ -1.24
PDPN-201ENST00000294489 OR51G1Q8NGK1 321 aa7.29□□□□□ -1.24
PDPN-201ENST00000294489 YPEL4Q96NS1 127 aa7.29□□□□□ -1.24
PDPN-201ENST00000294489 UHRF2Q96PU4 802 aa7.29□□□□□ -1.24
PDPN-201ENST00000294489 ARL2-SNX15V9GYD0 113 aa7.29□□□□□ -1.24
PDPN-201ENST00000294489 FCN1O00602 326 aa7.28□□□□□ -1.24
PDPN-201ENST00000294489 COX7A2P2O60397 106 aa7.28□□□□□ -1.24
PDPN-201ENST00000294489 OR7C2O60412 319 aa7.28□□□□□ -1.24
PDPN-201ENST00000294489 NDUFB4O95168 129 aa7.28□□□□□ -1.24
PDPN-201ENST00000294489 IGHV3-48P01763 117 aa7.28□□□□□ -1.24
PDPN-201ENST00000294489 CRYGCP07315 174 aa7.28□□□□□ -1.24
PDPN-201ENST00000294489 C8orf88P0DMB2 117 aa7.28□□□□□ -1.24
PDPN-201ENST00000294489 ELOBQ15370 118 aa7.28□□□□□ -1.24
PDPN-201ENST00000294489 ZFP82Q8N141 532 aa7.28□□□□□ -1.24
PDPN-201ENST00000294489 MALSU1Q96EH3 234 aa7.28□□□□□ -1.24
PDPN-201ENST00000294489 EAF1Q96JC9 268 aaPredicted RBP7.28□□□□□ -1.24
PDPN-201ENST00000294489 SLC25A33Q9BSK2 321 aa7.28□□□□□ -1.24
PDPN-201ENST00000294489 BIN3Q9NQY0 253 aa7.28□□□□□ -1.24
PDPN-201ENST00000294489 DOK5Q9P104 306 aa7.28□□□□□ -1.24
PDPN-201ENST00000294489 IGHV4-30-2A0A087WSY4 118 aa7.28□□□□□ -1.24
PDPN-201ENST00000294489 NPPCP23582 126 aa7.28□□□□□ -1.24
PDPN-201ENST00000294489 DYNAPQ8N1N2 210 aa7.28□□□□□ -1.24
PDPN-201ENST00000294489 TMEM37Q8WXS4 190 aa7.28□□□□□ -1.24
PDPN-201ENST00000294489 TNFRSF19Q9NS68 423 aa7.28□□□□□ -1.24
PDPN-201ENST00000294489 YTHDF2Q9Y5A9 579 aaKnown RBP7.28□□□□□ -1.24
PDPN-201ENST00000294489 MFAP2P55001 183 aa7.27□□□□□ -1.24
PDPN-201ENST00000294489 SSTP61278 116 aa7.27□□□□□ -1.24
PDPN-201ENST00000294489 C10orf113Q5VZT2 155 aa7.27□□□□□ -1.24
PDPN-201ENST00000294489 ZNF343Q6P1L6 599 aa7.27□□□□□ -1.24
PDPN-201ENST00000294489 TMEM116Q8NCL8 245 aa7.27□□□□□ -1.24
PDPN-201ENST00000294489 OR4X1Q8NH49 305 aa7.27□□□□□ -1.24
PDPN-201ENST00000294489 C2CD4CQ8TF44 421 aa7.27□□□□□ -1.24
PDPN-201ENST00000294489 Q8WTZ3 238 aa7.27□□□□□ -1.24
PDPN-201ENST00000294489 ZNF462Q96JM2 2506 aa7.27□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms