RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 GPR146Q96CH1 333 aa7.32□□□□□ -1.24
CCDC58-201ENST00000291458 NXF2Q9GZY0 626 aaKnown RBP7.32□□□□□ -1.24
CCDC58-201ENST00000291458 MRPL27Q9P0M9 148 aaKnown RBP7.32□□□□□ -1.24
CCDC58-201ENST00000291458 GPR132Q9UNW8 380 aa7.32□□□□□ -1.24
CCDC58-201ENST00000291458 V9GYH0 126 aa7.32□□□□□ -1.24
CCDC58-201ENST00000291458 LINC00854A0A1B0GVQ3 168 aa7.31□□□□□ -1.24
CCDC58-201ENST00000291458 A8MZ25 164 aa7.31□□□□□ -1.24
CCDC58-201ENST00000291458 CTSGP08311 255 aa7.31□□□□□ -1.24
CCDC58-201ENST00000291458 FAUP35544 74 aaKnown RBP7.31□□□□□ -1.24
CCDC58-201ENST00000291458 DHODHQ02127 395 aa7.31□□□□□ -1.24
CCDC58-201ENST00000291458 KLF9Q13886 244 aaPredicted RBP7.31□□□□□ -1.24
CCDC58-201ENST00000291458 ZNF79Q15937 498 aa7.31□□□□□ -1.24
CCDC58-201ENST00000291458 CADM3Q8N126 398 aa7.31□□□□□ -1.24
CCDC58-201ENST00000291458 GBGT1Q8N5D6 347 aa7.31□□□□□ -1.24
CCDC58-201ENST00000291458 TMEM116Q8NCL8 245 aa7.31□□□□□ -1.24
CCDC58-201ENST00000291458 DUSP18Q8NEJ0 188 aa7.31□□□□□ -1.24
CCDC58-201ENST00000291458 RBM38Q9H0Z9 239 aaKnown RBP7.31□□□□□ -1.24
CCDC58-201ENST00000291458 HEYLQ9NQ87 328 aaPredicted RBP7.31□□□□□ -1.24
CCDC58-201ENST00000291458 GAR1Q9NY12 217 aaKnown RBP7.31□□□□□ -1.24
CCDC58-201ENST00000291458 MRPL36Q9P0J6 103 aaKnown RBP7.31□□□□□ -1.24
CCDC58-201ENST00000291458 RABL2AQ9UBK7 228 aaPredicted RBP7.31□□□□□ -1.24
CCDC58-201ENST00000291458 RABL2BQ9UNT1 228 aa7.31□□□□□ -1.24
CCDC58-201ENST00000291458 IGHV7-4-1A0A0J9YVY3 117 aa7.3□□□□□ -1.24
CCDC58-201ENST00000291458 B3GALNT1O75752 331 aa7.3□□□□□ -1.24
CCDC58-201ENST00000291458 CDS2O95674 445 aa7.3□□□□□ -1.24
CCDC58-201ENST00000291458 C8orf88P0DMB2 117 aa7.3□□□□□ -1.24
CCDC58-201ENST00000291458 SULT1A3P0DMM9 295 aa7.3□□□□□ -1.24
CCDC58-201ENST00000291458 SULT1A4P0DMN0 295 aa7.3□□□□□ -1.24
CCDC58-201ENST00000291458 RPL35AP18077 110 aaKnown RBP7.3□□□□□ -1.24
CCDC58-201ENST00000291458 NPBWR1P48145 328 aa7.3□□□□□ -1.24
CCDC58-201ENST00000291458 INPP1P49441 399 aa7.3□□□□□ -1.24
CCDC58-201ENST00000291458 SUB1P53999 127 aaKnown RBP eCLIP7.3□□□□□ -1.24
CCDC58-201ENST00000291458 ELLP55199 621 aaPredicted RBP7.3□□□□□ -1.24
CCDC58-201ENST00000291458 AP3S2P59780 193 aa7.3□□□□□ -1.24
CCDC58-201ENST00000291458 SPCS3P61009 180 aa7.3□□□□□ -1.24
CCDC58-201ENST00000291458 TMEM187Q14656 261 aa7.3□□□□□ -1.24
CCDC58-201ENST00000291458 MLANAQ16655 118 aa7.3□□□□□ -1.24
CCDC58-201ENST00000291458 LAMTOR1Q6IAA8 161 aa7.3□□□□□ -1.24
CCDC58-201ENST00000291458 FAM219AQ8IW50 185 aa7.3□□□□□ -1.24
CCDC58-201ENST00000291458 ZNF414Q96IQ9 312 aa7.3□□□□□ -1.24
CCDC58-201ENST00000291458 RNF2Q99496 336 aa7.3□□□□□ -1.24
CCDC58-201ENST00000291458 SOSTQ9BQB4 213 aa7.3□□□□□ -1.24
CCDC58-201ENST00000291458 RHPN1-AS1Q9BWJ2 59 aa7.3□□□□□ -1.24
CCDC58-201ENST00000291458 HIPK2Q9H2X6 1198 aa7.3□□□□□ -1.24
CCDC58-201ENST00000291458 FNDC4Q9H6D8 234 aaPredicted RBP7.3□□□□□ -1.24
CCDC58-201ENST00000291458 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.3□□□□□ -1.24
CCDC58-201ENST00000291458 PUS1Q9Y606 427 aaKnown RBP eCLIP7.3□□□□□ -1.24
CCDC58-201ENST00000291458 TRAV25A0A0B4J276 109 aa7.29□□□□□ -1.24
CCDC58-201ENST00000291458 C15orf62A8K5M9 175 aa7.29□□□□□ -1.24
CCDC58-201ENST00000291458 LYL1P12980 280 aa7.29□□□□□ -1.24
CCDC58-201ENST00000291458 RND2P52198 227 aa7.29□□□□□ -1.24
CCDC58-201ENST00000291458 RPL11P62913 178 aaKnown RBP7.29□□□□□ -1.24
CCDC58-201ENST00000291458 SUPT4H1P63272 117 aaKnown RBP7.29□□□□□ -1.24
CCDC58-201ENST00000291458 ZNF124Q15973 351 aa7.29□□□□□ -1.24
CCDC58-201ENST00000291458 ANKRD55Q3KP44 614 aa7.29□□□□□ -1.24
CCDC58-201ENST00000291458 TIGITQ495A1 244 aa7.29□□□□□ -1.24
CCDC58-201ENST00000291458 TOMM20LQ6UXN7 152 aa7.29□□□□□ -1.24
CCDC58-201ENST00000291458 LYZL2Q7Z4W2 148 aa7.29□□□□□ -1.24
CCDC58-201ENST00000291458 APRG1Q8IVJ8 170 aa7.29□□□□□ -1.24
CCDC58-201ENST00000291458 SLC24A4Q8NFF2 622 aa7.29□□□□□ -1.24
CCDC58-201ENST00000291458 OR1S1Q8NH92 325 aa7.29□□□□□ -1.24
CCDC58-201ENST00000291458 ST8SIA2Q92186 375 aa7.29□□□□□ -1.24
CCDC58-201ENST00000291458 SCGB3A2Q96PL1 93 aa7.29□□□□□ -1.24
CCDC58-201ENST00000291458 SPAG8Q99932 426 aaPredicted RBP7.29□□□□□ -1.24
CCDC58-201ENST00000291458 GGTLC1Q9BX51 225 aa7.29□□□□□ -1.24
CCDC58-201ENST00000291458 SMPXQ9UHP9 88 aa7.29□□□□□ -1.24
CCDC58-201ENST00000291458 PAIP2BQ9ULR5 123 aaKnown RBP7.29□□□□□ -1.24
CCDC58-201ENST00000291458 KCNIP3Q9Y2W7 256 aa7.29□□□□□ -1.24
CCDC58-201ENST00000291458 TENM3Q9P273 2699 aa7.29□□□□□ -1.24
CCDC58-201ENST00000291458 LOC102724200A0A096LPH7 203 aaPredicted RBP7.28□□□□□ -1.24
CCDC58-201ENST00000291458 TRAV14DV4A0A0A6YYC5 116 aa7.28□□□□□ -1.24
CCDC58-201ENST00000291458 A0A1B0GU03 582 aa7.28□□□□□ -1.24
CCDC58-201ENST00000291458 OR4C46A6NHA9 309 aa7.28□□□□□ -1.24
CCDC58-201ENST00000291458 C3orf84H3BNL1 204 aa7.28□□□□□ -1.24
CCDC58-201ENST00000291458 CORTO00230 105 aa7.28□□□□□ -1.24
CCDC58-201ENST00000291458 CHEK1O14757 476 aa7.28□□□□□ -1.24
CCDC58-201ENST00000291458 TSPAN4O14817 238 aa7.28□□□□□ -1.24
CCDC58-201ENST00000291458 IFNA10P01566 189 aa7.28□□□□□ -1.24
CCDC58-201ENST00000291458 APOHP02749 345 aaPredicted RBP7.28□□□□□ -1.24
CCDC58-201ENST00000291458 IAPPP10997 89 aa7.28□□□□□ -1.24
CCDC58-201ENST00000291458 ANXA3P12429 323 aa7.28□□□□□ -1.24
CCDC58-201ENST00000291458 NPY1RP25929 384 aa7.28□□□□□ -1.24
CCDC58-201ENST00000291458 CCR6P51684 374 aa7.28□□□□□ -1.24
CCDC58-201ENST00000291458 ODF3L2Q3SX64 289 aa7.28□□□□□ -1.24
CCDC58-201ENST00000291458 SPANXN2Q5MJ10 180 aa7.28□□□□□ -1.24
CCDC58-201ENST00000291458 CASC10Q5T4H9 136 aa7.28□□□□□ -1.24
CCDC58-201ENST00000291458 TRIQKQ629K1 86 aa7.28□□□□□ -1.24
CCDC58-201ENST00000291458 ZNF600Q6ZNG1 722 aa7.28□□□□□ -1.24
CCDC58-201ENST00000291458 TCF24Q7RTU0 167 aa7.28□□□□□ -1.24
CCDC58-201ENST00000291458 CCDC190Q86UF4 302 aa7.28□□□□□ -1.24
CCDC58-201ENST00000291458 LGI3Q8N145 548 aa7.28□□□□□ -1.24
CCDC58-201ENST00000291458 ANAPC16Q96DE5 110 aa7.28□□□□□ -1.24
CCDC58-201ENST00000291458 ACY3Q96HD9 319 aa7.28□□□□□ -1.24
CCDC58-201ENST00000291458 ATP6V0BQ99437 205 aa7.28□□□□□ -1.24
CCDC58-201ENST00000291458 TXN2Q99757 166 aa7.28□□□□□ -1.24
CCDC58-201ENST00000291458 GINS3Q9BRX5 216 aa7.28□□□□□ -1.24
CCDC58-201ENST00000291458 RBKSQ9H477 322 aa7.28□□□□□ -1.24
CCDC58-201ENST00000291458 TMEM56-RWDD3S4R434 201 aa7.28□□□□□ -1.24
CCDC58-201ENST00000291458 RPS10-NUDT3A0A1W2PQS6 291 aa7.27□□□□□ -1.25
CCDC58-201ENST00000291458 K7EMT4 169 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms