RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 PRORYQ9H606 182 aa9.49□□□□□ -0.89
NPC1L1-201ENST00000289547 SEC11AP67812 179 aa9.49□□□□□ -0.89
NPC1L1-201ENST00000289547 TMEM30BQ3MIR4 351 aa9.49□□□□□ -0.89
NPC1L1-201ENST00000289547 TMEM186Q96B77 213 aa9.49□□□□□ -0.89
NPC1L1-201ENST00000289547 EAF1Q96JC9 268 aaPredicted RBP9.49□□□□□ -0.89
NPC1L1-201ENST00000289547 C20orf144Q9BQM9 153 aa9.49□□□□□ -0.89
NPC1L1-201ENST00000289547 HIGD1CA8MV81 97 aa9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 FAM157AC9JC47 383 aa9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 PRSS2P07478 247 aa9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 C3orf79P0CE67 100 aa9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 EFNA4P52798 201 aa9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 B3GALT5-AS1P59052 145 aa9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 CKS1BP61024 79 aa9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 OCIAD2Q56VL3 154 aa9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 OR10J3Q5JRS4 329 aa9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 C10orf91Q5T1B1 145 aa9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 KLK15Q9H2R5 256 aa9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 IGKV1D-13A0A0B4J2D9 117 aa9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 RBFOX2O43251 390 aaKnown RBP eCLIP9.48□□□□□ -0.891e-6■■■■□ 26.3
NPC1L1-201ENST00000289547 TGFAP01135 160 aa9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 IGHV3-48P01763 117 aa9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 IGKV1-13P0DP09 117 aa9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 FOXL1Q12952 345 aa9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 WFDC3Q8IUB2 231 aa9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 RNASEH2CQ8TDP1 164 aaKnown RBP9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 IGHV1-18A0A0C4DH31 117 aa9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 C19orf24Q9BVV8 132 aa9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 BEX4Q9NWD9 120 aaPredicted RBP9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 CRIM1Q9NZV1 1036 aa9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 IGKV1-9A0A0C4DH69 117 aa9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 PCNX2A6NKB5 2137 aa9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 FAM106CPP0CH98 169 aa9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 WT1P19544 449 aaPredicted RBP9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 ZNF826PQ6ZT77 177 aa9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 LRTM2Q8N967 370 aa9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 C1QTNF5Q9BXJ0 243 aa9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 CST9LQ9H4G1 147 aa9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 DENND4CQ5VZ89 1909 aa9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 SCN8AQ9UQD0 1980 aa9.48□□□□□ -0.89
NPC1L1-201ENST00000289547 ABCA1O95477 2261 aa9.47□□□□□ -0.89
NPC1L1-201ENST00000289547 DGAT2L7PQ6IED9 249 aa9.47□□□□□ -0.89
NPC1L1-201ENST00000289547 HCP5Q6MZN7 132 aa9.47□□□□□ -0.89
NPC1L1-201ENST00000289547 LINC01551Q86U37 167 aa9.47□□□□□ -0.89
NPC1L1-201ENST00000289547 FAM89BQ8N5H3 189 aa9.47□□□□□ -0.89
NPC1L1-201ENST00000289547 SFTA2Q6UW10 78 aa9.47□□□□□ -0.89
NPC1L1-201ENST00000289547 GOLT1AQ6ZVE7 132 aa9.47□□□□□ -0.89
NPC1L1-201ENST00000289547 OBSL1O75147 1896 aa9.47□□□□□ -0.89
NPC1L1-201ENST00000289547 IQCF6A8MYZ5 107 aa9.47□□□□□ -0.89
NPC1L1-201ENST00000289547 CRYGSP22914 178 aa9.47□□□□□ -0.89
NPC1L1-201ENST00000289547 LGALS7P47929 136 aa9.47□□□□□ -0.89
NPC1L1-201ENST00000289547 FAM90A2PQ658T7 463 aa9.47□□□□□ -0.89
NPC1L1-201ENST00000289547 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.47□□□□□ -0.89
NPC1L1-201ENST00000289547 DMRTC2Q8IXT2 367 aaPredicted RBP9.47□□□□□ -0.89
NPC1L1-201ENST00000289547 OR10W1Q8NGF6 305 aa9.47□□□□□ -0.89
NPC1L1-201ENST00000289547 A0A1B0GUS0 222 aa9.46□□□□□ -0.89
NPC1L1-201ENST00000289547 SCGB1A1P11684 91 aa9.46□□□□□ -0.89
NPC1L1-201ENST00000289547 IGFBP2P18065 325 aa9.46□□□□□ -0.89
NPC1L1-201ENST00000289547 MPV17P39210 176 aa9.46□□□□□ -0.89
NPC1L1-201ENST00000289547 MIR17HGQ75NE6 70 aa9.46□□□□□ -0.89
NPC1L1-201ENST00000289547 RPP25LQ8N5L8 163 aaKnown RBP9.46□□□□□ -0.89
NPC1L1-201ENST00000289547 OSTCQ9NRP0 149 aa9.46□□□□□ -0.89
NPC1L1-201ENST00000289547 TM4SF5O14894 197 aa9.46□□□□□ -0.89
NPC1L1-201ENST00000289547 GAGE1Q13065 139 aa9.46□□□□□ -0.89
NPC1L1-201ENST00000289547 OR4X2Q8NGF9 303 aa9.46□□□□□ -0.89
NPC1L1-201ENST00000289547 OR5P3Q8WZ94 311 aa9.46□□□□□ -0.89
NPC1L1-201ENST00000289547 PRELID3AQ96N28 172 aa9.46□□□□□ -0.89
NPC1L1-201ENST00000289547 SLC25A15Q9Y619 301 aa9.46□□□□□ -0.89
NPC1L1-201ENST00000289547 DOCK11Q5JSL3 2073 aa9.46□□□□□ -0.89
NPC1L1-201ENST00000289547 EFNA2O43921 213 aa9.46□□□□□ -0.9
NPC1L1-201ENST00000289547 CEACAM8P31997 349 aaPredicted RBP9.46□□□□□ -0.9
NPC1L1-201ENST00000289547 GCSAMLQ5JQS6 135 aa9.46□□□□□ -0.9
NPC1L1-201ENST00000289547 NPIPB3Q92617 1050 aa9.46□□□□□ -0.9
NPC1L1-201ENST00000289547 MRPL32Q9BYC8 188 aaKnown RBP9.46□□□□□ -0.9
NPC1L1-201ENST00000289547 SPRY4Q9C004 299 aa9.46□□□□□ -0.9
NPC1L1-201ENST00000289547 A0A1B0GUT8 65 aa9.46□□□□□ -0.9
NPC1L1-201ENST00000289547 HGFACQ04756 655 aa9.46□□□□□ -0.9
NPC1L1-201ENST00000289547 FAM166AQ6J272 317 aa9.46□□□□□ -0.9
NPC1L1-201ENST00000289547 PCSK4Q6UW60 755 aa9.46□□□□□ -0.9
NPC1L1-201ENST00000289547 NUP37Q8NFH4 326 aa9.46□□□□□ -0.9
NPC1L1-201ENST00000289547 A0A087X0K7 114 aa9.45□□□□□ -0.9
NPC1L1-201ENST00000289547 C17orf98A8MV24 154 aa9.45□□□□□ -0.9
NPC1L1-201ENST00000289547 PEX7O00628 323 aa9.45□□□□□ -0.9
NPC1L1-201ENST00000289547 APOMO95445 188 aa9.45□□□□□ -0.9
NPC1L1-201ENST00000289547 ESDP10768 282 aa9.45□□□□□ -0.9
NPC1L1-201ENST00000289547 LYL1P12980 280 aa9.45□□□□□ -0.9
NPC1L1-201ENST00000289547 SLC25A16P16260 332 aa9.45□□□□□ -0.9
NPC1L1-201ENST00000289547 SAMD5Q5TGI4 173 aa9.45□□□□□ -0.9
NPC1L1-201ENST00000289547 A0A0G2JLM5 398 aa9.45□□□□□ -0.9
NPC1L1-201ENST00000289547 SPSB3Q6PJ21 355 aa9.45□□□□□ -0.9
NPC1L1-201ENST00000289547 GPX1P07203 203 aa9.45□□□□□ -0.9
NPC1L1-201ENST00000289547 CELA3BP08861 270 aa9.45□□□□□ -0.9
NPC1L1-201ENST00000289547 FAM90A1Q86YD7 464 aa9.45□□□□□ -0.9
NPC1L1-201ENST00000289547 ZIC4Q8N9L1 334 aa9.45□□□□□ -0.9
NPC1L1-201ENST00000289547 NCOR1P1Q9H4R4 102 aa9.45□□□□□ -0.9
NPC1L1-201ENST00000289547 MUC21A0A0G2JKD1 596 aa9.45□□□□□ -0.9
NPC1L1-201ENST00000289547 MUC21A0A140T8X8 626 aa9.45□□□□□ -0.9
NPC1L1-201ENST00000289547 TSPAN13O95857 204 aa9.45□□□□□ -0.9
NPC1L1-201ENST00000289547 MUC21Q5SSG8 566 aa9.45□□□□□ -0.9
NPC1L1-201ENST00000289547 hDV102S1A0JD36 115 aa9.44□□□□□ -0.9
NPC1L1-201ENST00000289547 GATA2P23769 480 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms