RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 PTPN13Q12923 2485 aa11.02□□□□□ -0.65
SCAF4-201ENST00000286835 ANKHD1Q8IWZ3 2542 aaKnown RBP11.02□□□□□ -0.65
SCAF4-201ENST00000286835 A0A1W2PRD5 423 aa11.02□□□□□ -0.65
SCAF4-201ENST00000286835 A0A1W2PRF3 423 aa11.02□□□□□ -0.65
SCAF4-201ENST00000286835 A0A1W2PRM7 423 aa11.02□□□□□ -0.65
SCAF4-201ENST00000286835 A0A1W2PS18 150 aa11.02□□□□□ -0.65
SCAF4-201ENST00000286835 PGPA6NDG6 321 aa11.02□□□□□ -0.65
SCAF4-201ENST00000286835 MOSP00540 346 aa11.02□□□□□ -0.65
SCAF4-201ENST00000286835 C1orf185Q5T7R7 199 aa11.02□□□□□ -0.65
SCAF4-201ENST00000286835 C20orf144Q9BQM9 153 aa11.02□□□□□ -0.65
SCAF4-201ENST00000286835 TCF24Q7RTU0 167 aa11.02□□□□□ -0.65
SCAF4-201ENST00000286835 FREM2Q5SZK8 3169 aa11.01□□□□□ -0.65
SCAF4-201ENST00000286835 NCKAP5O14513 1909 aa11.01□□□□□ -0.65
SCAF4-201ENST00000286835 TRBV9A0A0B4J1U6 114 aa11.01□□□□□ -0.65
SCAF4-201ENST00000286835 SERTM2A0A1B0GWG4 89 aa11.01□□□□□ -0.65
SCAF4-201ENST00000286835 CD24P25063 80 aa11.01□□□□□ -0.65
SCAF4-201ENST00000286835 SUB1P53999 127 aaKnown RBP eCLIP11.01□□□□□ -0.65
SCAF4-201ENST00000286835 UCNP55089 124 aa11.01□□□□□ -0.65
SCAF4-201ENST00000286835 PEAR1Q5VY43 1037 aaPredicted RBP11.01□□□□□ -0.65
SCAF4-201ENST00000286835 SP5Q6BEB4 398 aaPredicted RBP11.01□□□□□ -0.65
SCAF4-201ENST00000286835 STPG4Q8N801 248 aa11.01□□□□□ -0.65
SCAF4-201ENST00000286835 COL25A1Q9BXS0 654 aaPredicted RBP11.01□□□□□ -0.65
SCAF4-201ENST00000286835 SAP30LQ9HAJ7 183 aa11.01□□□□□ -0.65
SCAF4-201ENST00000286835 COL5A1P20908 1838 aaPredicted RBP11.01□□□□□ -0.65
SCAF4-201ENST00000286835 HIGD1CA8MV81 97 aa11.01□□□□□ -0.65
SCAF4-201ENST00000286835 TDGF1P13385 188 aa11.01□□□□□ -0.65
SCAF4-201ENST00000286835 PRB3Q04118 309 aaPredicted RBP11.01□□□□□ -0.65
SCAF4-201ENST00000286835 TNXAQ16473 311 aa11.01□□□□□ -0.65
SCAF4-201ENST00000286835 COX19Q49B96 90 aa11.01□□□□□ -0.65
SCAF4-201ENST00000286835 LEMD1Q68G75 181 aa11.01□□□□□ -0.65
SCAF4-201ENST00000286835 WDR31Q8NA23 367 aa11.01□□□□□ -0.65
SCAF4-201ENST00000286835 C10orf55Q5SWW7 151 aa11□□□□□ -0.65
SCAF4-201ENST00000286835 DCAF16Q9NXF7 216 aa11□□□□□ -0.65
SCAF4-201ENST00000286835 V9GYV3 84 aa11□□□□□ -0.65
SCAF4-201ENST00000286835 IGKV1D-17A0A075B6S4 117 aa11□□□□□ -0.65
SCAF4-201ENST00000286835 CX3CL1P78423 397 aa11□□□□□ -0.65
SCAF4-201ENST00000286835 FAM27E3Q08E93 113 aa11□□□□□ -0.65
SCAF4-201ENST00000286835 CT45A1Q5HYN5 189 aa11□□□□□ -0.65
SCAF4-201ENST00000286835 C9orf106Q8NAJ2 232 aa11□□□□□ -0.65
SCAF4-201ENST00000286835 CT45A3Q8NHU0 189 aa11□□□□□ -0.65
SCAF4-201ENST00000286835 ADTRPQ96IZ2 230 aa11□□□□□ -0.65
SCAF4-201ENST00000286835 IGHV2OR16-5A0A0B4J2B6 119 aa11□□□□□ -0.65
SCAF4-201ENST00000286835 P01737 135 aa11□□□□□ -0.65
SCAF4-201ENST00000286835 IGKV1-16P04430 117 aa11□□□□□ -0.65
SCAF4-201ENST00000286835 HIST1H1EP10412 219 aaKnown RBP11□□□□□ -0.65
SCAF4-201ENST00000286835 TNFRSF1AP19438 455 aa11□□□□□ -0.65
SCAF4-201ENST00000286835 HTR1DP28221 377 aa11□□□□□ -0.65
SCAF4-201ENST00000286835 VDAC2P45880 294 aaPredicted RBP11□□□□□ -0.65
SCAF4-201ENST00000286835 DUX4L9Q6RFH8 374 aaPredicted RBP11□□□□□ -0.65
SCAF4-201ENST00000286835 TEX43Q6ZNM6 134 aa11□□□□□ -0.65
SCAF4-201ENST00000286835 SPACA3Q8IXA5 215 aa11□□□□□ -0.65
SCAF4-201ENST00000286835 ZCCHC24Q8N2G6 241 aaKnown RBP11□□□□□ -0.65
SCAF4-201ENST00000286835 ZFP30Q9Y2G7 519 aa11□□□□□ -0.65
SCAF4-201ENST00000286835 SH2D7A6NKC9 451 aaPredicted RBP10.99□□□□□ -0.65
SCAF4-201ENST00000286835 HYPMO75409 117 aa10.99□□□□□ -0.65
SCAF4-201ENST00000286835 CLEC7AQ9BXN2 247 aa10.99□□□□□ -0.65
SCAF4-201ENST00000286835 YPEL1O60688 119 aa10.99□□□□□ -0.65
SCAF4-201ENST00000286835 TSKUQ8WUA8 353 aa10.99□□□□□ -0.65
SCAF4-201ENST00000286835 YPEL2Q96QA6 119 aa10.99□□□□□ -0.65
SCAF4-201ENST00000286835 RNF7Q9UBF6 113 aa10.99□□□□□ -0.65
SCAF4-201ENST00000286835 CSPG4Q6UVK1 2322 aa10.99□□□□□ -0.65
SCAF4-201ENST00000286835 BMPR1BO00238 502 aa10.99□□□□□ -0.65
SCAF4-201ENST00000286835 COL8A1P27658 744 aa10.99□□□□□ -0.65
SCAF4-201ENST00000286835 OR1L8Q8NGR8 309 aa10.99□□□□□ -0.65
SCAF4-201ENST00000286835 IDI2-AS1Q9NZ38 188 aa10.99□□□□□ -0.65
SCAF4-201ENST00000286835 LYZP61626 148 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 C19orf35Q6ZS72 473 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 FAM168AQ92567 244 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 SNRNP40Q96DI7 357 aaKnown RBP10.98□□□□□ -0.65
SCAF4-201ENST00000286835 IFI27L2Q9H2X8 130 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 OSTCQ9NRP0 149 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 COL4A2P08572 1712 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 A0A1B0GWJ7 208 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 A0A1W2PN81 502 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 GGTLC3B5MD39 225 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 LEPROTL1O95214 131 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 BTF3P20290 206 aaKnown RBP10.98□□□□□ -0.65
SCAF4-201ENST00000286835 S100A7P31151 101 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 SLAQ13239 276 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 TBR1Q16650 682 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 OR8B3Q8NGG8 313 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 Q8TCH9 128 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 TANC2Q9HCD6 1990 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 IZUMO1RA6ND01 250 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 C9JCJ5 164 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 J3QW42 95 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 ISLRO14498 428 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 NUDT3O95989 172 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 SAA1P0DJI8 122 aaPredicted RBP10.98□□□□□ -0.65
SCAF4-201ENST00000286835 AREGP15514 252 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 TMEM177Q53S58 311 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 UTF1Q5T230 341 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 TMEM136Q6ZRR5 245 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 C11orf53Q8IXP5 236 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 GCSAMQ8N6F7 178 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 TP53TG3Q9ULZ0 132 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 TRAV9-1A0A075B6T8 112 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 TMSB15BA0A087X1C1 80 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 hADV38S2A0JD32 116 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 OR4C46A6NHA9 309 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms