RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 RFLNBQ8N5W9 214 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 OR13A1Q8NGR1 328 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 PPP1R3EQ9H7J1 279 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 A0A0J9YW62 118 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 SLC25A47Q6Q0C1 308 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 ACP7Q6ZNF0 438 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 KCNK17Q96T54 332 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 PRADC1Q9BSG0 188 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 DPM3Q9P2X0 92 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 EPDR1Q9UM22 224 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 C9orf50Q5SZB4 431 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 TFF3Q07654 80 aa7.38□□□□□ -1.23
NIPBL-201ENST00000282516 MUC21A0A0G2JKD1 596 aa7.38□□□□□ -1.23
NIPBL-201ENST00000282516 MUC21A0A140T8X8 626 aa7.38□□□□□ -1.23
NIPBL-201ENST00000282516 PROB1E7EW31 1015 aa7.38□□□□□ -1.23
NIPBL-201ENST00000282516 MUC21Q5SSG8 566 aa7.38□□□□□ -1.23
NIPBL-201ENST00000282516 A0A1W2PRS3 328 aa7.38□□□□□ -1.23
NIPBL-201ENST00000282516 IGHMP01871 453 aa7.38□□□□□ -1.23
NIPBL-201ENST00000282516 ZAR1Q86SH2 424 aa7.38□□□□□ -1.23
NIPBL-201ENST00000282516 FAM90A1Q86YD7 464 aa7.38□□□□□ -1.23
NIPBL-201ENST00000282516 FAM168AQ92567 244 aa7.38□□□□□ -1.23
NIPBL-201ENST00000282516 ANAPC10Q9UM13 185 aa7.38□□□□□ -1.23
NIPBL-201ENST00000282516 MED12LQ86YW9 2145 aa7.38□□□□□ -1.23
NIPBL-201ENST00000282516 IGHV3-23P01764 117 aa7.38□□□□□ -1.23
NIPBL-201ENST00000282516 IGHV3OR16-10A0A075B7F0 116 aa7.38□□□□□ -1.23
NIPBL-201ENST00000282516 MED13Q9UHV7 2174 aa7.38□□□□□ -1.23
NIPBL-201ENST00000282516 C2orf82Q6UX34 121 aa7.38□□□□□ -1.23
NIPBL-201ENST00000282516 ZIC4Q8N9L1 334 aa7.38□□□□□ -1.23
NIPBL-201ENST00000282516 MRAPQ8TCY5 172 aa7.38□□□□□ -1.23
NIPBL-201ENST00000282516 SLC25A38Q96DW6 304 aa7.38□□□□□ -1.23
NIPBL-201ENST00000282516 ZNF703Q9H7S9 590 aaPredicted RBP7.38□□□□□ -1.23
NIPBL-201ENST00000282516 SIRT4Q9Y6E7 314 aaPredicted RBP7.38□□□□□ -1.23
NIPBL-201ENST00000282516 TRBV5-3A0A0A0MS03 114 aa7.37□□□□□ -1.23
NIPBL-201ENST00000282516 INS-IGF2F8WCM5 200 aa7.37□□□□□ -1.23
NIPBL-201ENST00000282516 INSP01308 110 aa7.37□□□□□ -1.23
NIPBL-201ENST00000282516 FABP5P3A8MUU1 101 aa7.37□□□□□ -1.23
NIPBL-201ENST00000282516 H3BMM0 161 aa7.37□□□□□ -1.23
NIPBL-201ENST00000282516 LILRA1O75019 489 aa7.37□□□□□ -1.23
NIPBL-201ENST00000282516 CMC4P56277 68 aaPredicted RBP7.37□□□□□ -1.23
NIPBL-201ENST00000282516 SPANXDQ9BXN6 97 aa7.37□□□□□ -1.23
NIPBL-201ENST00000282516 DTX4Q9Y2E6 619 aa7.37□□□□□ -1.23
NIPBL-201ENST00000282516 LRP5O75197 1615 aa7.37□□□□□ -1.23
NIPBL-201ENST00000282516 A0A087WX48 190 aa7.37□□□□□ -1.23
NIPBL-201ENST00000282516 HLA-DQB1P01920 261 aa7.37□□□□□ -1.23
NIPBL-201ENST00000282516 IGFBP2P18065 325 aa7.37□□□□□ -1.23
NIPBL-201ENST00000282516 LIMS1P48059 325 aa7.37□□□□□ -1.23
NIPBL-201ENST00000282516 CLEC19AQ6UXS0 136 aa7.37□□□□□ -1.23
NIPBL-201ENST00000282516 A0A1W2PRX2 142 aa7.37□□□□□ -1.23
NIPBL-201ENST00000282516 INAFM2P0DMQ5 153 aa7.37□□□□□ -1.23
NIPBL-201ENST00000282516 NPIPB13A6NJU9 1138 aa7.37□□□□□ -1.23
NIPBL-201ENST00000282516 PSCAO43653 123 aa7.37□□□□□ -1.23
NIPBL-201ENST00000282516 TMEM170AQ8WVE7 144 aa7.37□□□□□ -1.23
NIPBL-201ENST00000282516 RASL10AQ92737 203 aa7.37□□□□□ -1.23
NIPBL-201ENST00000282516 NBR2O15453 112 aa7.36□□□□□ -1.23
NIPBL-201ENST00000282516 GAGE2AQ6NT46 116 aa7.36□□□□□ -1.23
NIPBL-201ENST00000282516 GTF3AQ92664 365 aaKnown RBP7.36□□□□□ -1.23
NIPBL-201ENST00000282516 ZIC3O60481 467 aa7.36□□□□□ -1.23
NIPBL-201ENST00000282516 EFEMP2O95967 443 aa7.36□□□□□ -1.23
NIPBL-201ENST00000282516 CD5P06127 495 aa7.36□□□□□ -1.23
NIPBL-201ENST00000282516 IFI6P09912 130 aa7.36□□□□□ -1.23
NIPBL-201ENST00000282516 ASPHD2Q6ICH7 369 aa7.36□□□□□ -1.23
NIPBL-201ENST00000282516 SLC25A48Q6ZT89 311 aaKnown RBP7.36□□□□□ -1.23
NIPBL-201ENST00000282516 GNB1LQ9BYB4 327 aa7.36□□□□□ -1.23
NIPBL-201ENST00000282516 RNF125Q96EQ8 232 aa7.36□□□□□ -1.23
NIPBL-201ENST00000282516 TRPM3Q9HCF6 1732 aaPredicted RBP7.36□□□□□ -1.23
NIPBL-201ENST00000282516 IGKV1D-16P01601 117 aa7.36□□□□□ -1.23
NIPBL-201ENST00000282516 Q6ZT83 130 aa7.36□□□□□ -1.23
NIPBL-201ENST00000282516 IFI27L1Q96BM0 104 aa7.36□□□□□ -1.23
NIPBL-201ENST00000282516 ESDP10768 282 aa7.36□□□□□ -1.23
NIPBL-201ENST00000282516 FAM219BQ5XKK7 198 aa7.36□□□□□ -1.23
NIPBL-201ENST00000282516 OCIAD2Q56VL3 154 aa7.36□□□□□ -1.23
NIPBL-201ENST00000282516 FAM90A2PQ658T7 463 aa7.36□□□□□ -1.23
NIPBL-201ENST00000282516 HELZP42694 1942 aaKnown RBP7.36□□□□□ -1.23
NIPBL-201ENST00000282516 IGLV1-36A0A0B4J1U3 117 aa7.36□□□□□ -1.23
NIPBL-201ENST00000282516 C1QAP02745 245 aa7.36□□□□□ -1.23
NIPBL-201ENST00000282516 GPHA2Q96T91 129 aa7.36□□□□□ -1.23
NIPBL-201ENST00000282516 NEU4Q8WWR8 484 aaPredicted RBP7.35□□□□□ -1.23
NIPBL-201ENST00000282516 LINC00312Q9Y6C7 94 aa7.35□□□□□ -1.23
NIPBL-201ENST00000282516 APOBEC3AP31941 199 aaPredicted RBP7.35□□□□□ -1.23
NIPBL-201ENST00000282516 ERCC8Q13216 396 aa7.35□□□□□ -1.23
NIPBL-201ENST00000282516 TEX43Q6ZNM6 134 aa7.35□□□□□ -1.23
NIPBL-201ENST00000282516 CHAC1Q9BUX1 264 aa7.35□□□□□ -1.23
NIPBL-201ENST00000282516 GP6Q9HCN6 339 aa7.35□□□□□ -1.23
NIPBL-201ENST00000282516 PTPN13Q12923 2485 aa7.35□□□□□ -1.23
NIPBL-201ENST00000282516 OVOL1O14753 267 aa7.35□□□□□ -1.23
NIPBL-201ENST00000282516 SRP19P09132 144 aaKnown RBP7.35□□□□□ -1.23
NIPBL-201ENST00000282516 PLPPR1Q8TBJ4 325 aa7.35□□□□□ -1.23
NIPBL-201ENST00000282516 MALRD1Q5VYJ5 2156 aa7.35□□□□□ -1.23
NIPBL-201ENST00000282516 KLF4O43474 513 aa7.35□□□□□ -1.23
NIPBL-201ENST00000282516 LILRA6Q6PI73 481 aa7.35□□□□□ -1.23
NIPBL-201ENST00000282516 SIPA1L3O60292 1781 aaPredicted RBP7.35□□□□□ -1.23
NIPBL-201ENST00000282516 MRPL52Q86TS9 123 aaKnown RBP7.35□□□□□ -1.23
NIPBL-201ENST00000282516 PLXND1Q9Y4D7 1925 aa7.34□□□□□ -1.23
NIPBL-201ENST00000282516 TCRBV4S1A1TA0A5B7 111 aa7.34□□□□□ -1.23
NIPBL-201ENST00000282516 STPG1Q5TH74 334 aa7.34□□□□□ -1.23
NIPBL-201ENST00000282516 GFI1BQ5VTD9 330 aa7.34□□□□□ -1.23
NIPBL-201ENST00000282516 FBXL15Q9H469 300 aa7.34□□□□□ -1.23
NIPBL-201ENST00000282516 OSTCQ9NRP0 149 aa7.34□□□□□ -1.23
NIPBL-201ENST00000282516 YBX2Q9Y2T7 364 aaKnown RBP7.34□□□□□ -1.23
NIPBL-201ENST00000282516 S4R3C0 116 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms