RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 LRRC75BQ2VPJ9 315 aa9.29□□□□□ -0.92
SSRP1-201ENST00000278412 LINC01356Q8N9X3 169 aa9.29□□□□□ -0.92
SSRP1-201ENST00000278412 OR5B3Q8NH48 314 aa9.29□□□□□ -0.92
SSRP1-201ENST00000278412 FAM213BQ8TBF2 198 aa9.29□□□□□ -0.92
SSRP1-201ENST00000278412 CIB3Q96Q77 187 aaPredicted RBP9.29□□□□□ -0.92
SSRP1-201ENST00000278412 TUBA4BQ9H853 241 aa9.29□□□□□ -0.92
SSRP1-201ENST00000278412 FAM96BQ9Y3D0 163 aa9.29□□□□□ -0.92
SSRP1-201ENST00000278412 NIPBLQ6KC79 2804 aaeCLIP9.28□□□□□ -0.92
SSRP1-201ENST00000278412 CNIH1O95406 144 aa9.28□□□□□ -0.92
SSRP1-201ENST00000278412 RPL27AP46776 148 aaKnown RBP9.28□□□□□ -0.92
SSRP1-201ENST00000278412 DSCR9P59020 149 aa9.28□□□□□ -0.92
SSRP1-201ENST00000278412 ZNF266Q14584 549 aa9.28□□□□□ -0.92
SSRP1-201ENST00000278412 C5orf64Q2M2E5 130 aa9.28□□□□□ -0.92
SSRP1-201ENST00000278412 MINOS1Q5TGZ0 78 aa9.28□□□□□ -0.92
SSRP1-201ENST00000278412 TREML4Q6UXN2 200 aa9.28□□□□□ -0.92
SSRP1-201ENST00000278412 Q8N9W7 124 aa9.28□□□□□ -0.92
SSRP1-201ENST00000278412 TEX45Q8NA69 505 aa9.28□□□□□ -0.92
SSRP1-201ENST00000278412 CACFD1Q9UGQ2 172 aa9.28□□□□□ -0.92
SSRP1-201ENST00000278412 MINOS1-NBL1R4GNA1 71 aa9.28□□□□□ -0.92
SSRP1-201ENST00000278412 FN1P02751 2386 aaKnown RBP9.28□□□□□ -0.92
SSRP1-201ENST00000278412 BTBD17A6NE02 478 aa9.28□□□□□ -0.92
SSRP1-201ENST00000278412 ACTL6BO94805 426 aa9.28□□□□□ -0.92
SSRP1-201ENST00000278412 HOXA5P20719 270 aa9.28□□□□□ -0.92
SSRP1-201ENST00000278412 DDTP30046 118 aa9.28□□□□□ -0.92
SSRP1-201ENST00000278412 HBG1P69891 147 aa9.28□□□□□ -0.92
SSRP1-201ENST00000278412 HBG2P69892 147 aa9.28□□□□□ -0.92
SSRP1-201ENST00000278412 CX3CL1P78423 397 aa9.28□□□□□ -0.92
SSRP1-201ENST00000278412 ZNF726P1Q15940 193 aa9.28□□□□□ -0.92
SSRP1-201ENST00000278412 ASPHD1Q5U4P2 390 aa9.28□□□□□ -0.92
SSRP1-201ENST00000278412 OR2T10Q8NGZ9 312 aa9.28□□□□□ -0.92
SSRP1-201ENST00000278412 DUX5Q96PT3 197 aa9.28□□□□□ -0.92
SSRP1-201ENST00000278412 SMR3AQ99954 134 aa9.28□□□□□ -0.92
SSRP1-201ENST00000278412 RAB4AP20338 218 aa9.27□□□□□ -0.92
SSRP1-201ENST00000278412 SNCAP37840 140 aa9.27□□□□□ -0.92
SSRP1-201ENST00000278412 SULT1A2P50226 295 aa9.27□□□□□ -0.92
SSRP1-201ENST00000278412 FGF8P55075 233 aaPredicted RBP9.27□□□□□ -0.92
SSRP1-201ENST00000278412 VSTM2AQ8TAG5 236 aa9.27□□□□□ -0.92
SSRP1-201ENST00000278412 MGST2Q99735 147 aa9.27□□□□□ -0.92
SSRP1-201ENST00000278412 RPRMQ9NS64 109 aa9.27□□□□□ -0.92
SSRP1-201ENST00000278412 H3BUX3 64 aa9.27□□□□□ -0.93
SSRP1-201ENST00000278412 AMY1AP04745 511 aa9.27□□□□□ -0.93
SSRP1-201ENST00000278412 LOXL1Q08397 574 aaPredicted RBP9.27□□□□□ -0.93
SSRP1-201ENST00000278412 FXYD3Q14802 87 aa9.27□□□□□ -0.93
SSRP1-201ENST00000278412 BSXQ3C1V8 233 aa9.27□□□□□ -0.93
SSRP1-201ENST00000278412 CDPF1Q6NVV7 123 aa9.27□□□□□ -0.93
SSRP1-201ENST00000278412 BTNL8Q6UX41 500 aa9.27□□□□□ -0.93
SSRP1-201ENST00000278412 MMD2Q8IY49 270 aa9.27□□□□□ -0.93
SSRP1-201ENST00000278412 MISP3Q96FF7 219 aa9.27□□□□□ -0.93
SSRP1-201ENST00000278412 NPCDR1Q9BY65 106 aa9.27□□□□□ -0.93
SSRP1-201ENST00000278412 TBL2Q9Y4P3 447 aaKnown RBP9.27□□□□□ -0.93
SSRP1-201ENST00000278412 CXorf65A6NEN9 183 aa9.27□□□□□ -0.93
SSRP1-201ENST00000278412 SOX15O60248 233 aa9.27□□□□□ -0.93
SSRP1-201ENST00000278412 NDUFA3O95167 84 aa9.27□□□□□ -0.93
SSRP1-201ENST00000278412 IFNA5P01569 189 aa9.27□□□□□ -0.93
SSRP1-201ENST00000278412 EGR2P11161 476 aaPredicted RBP9.27□□□□□ -0.93
SSRP1-201ENST00000278412 CD81P60033 236 aa9.27□□□□□ -0.93
SSRP1-201ENST00000278412 PKIAP61925 76 aa9.27□□□□□ -0.93
SSRP1-201ENST00000278412 MIC13Q5XKP0 118 aa9.27□□□□□ -0.93
SSRP1-201ENST00000278412 ABHD5Q8WTS1 349 aa9.27□□□□□ -0.93
SSRP1-201ENST00000278412 RNF141Q8WVD5 230 aa9.27□□□□□ -0.93
SSRP1-201ENST00000278412 ACY3Q96HD9 319 aa9.27□□□□□ -0.93
SSRP1-201ENST00000278412 TMEM147Q9BVK8 224 aa9.27□□□□□ -0.93
SSRP1-201ENST00000278412 NSD1Q96L73 2696 aaPredicted RBP9.27□□□□□ -0.93
SSRP1-201ENST00000278412 IGHV7-81A0A0B4J1V7 117 aa9.26□□□□□ -0.93
SSRP1-201ENST00000278412 C9JQL5 133 aa9.26□□□□□ -0.93
SSRP1-201ENST00000278412 RAB5AP20339 215 aa9.26□□□□□ -0.93
SSRP1-201ENST00000278412 CDX1P47902 265 aaPredicted RBP9.26□□□□□ -0.93
SSRP1-201ENST00000278412 NUTF2P61970 127 aaKnown RBP9.26□□□□□ -0.93
SSRP1-201ENST00000278412 GAMTQ14353 236 aa9.26□□□□□ -0.93
SSRP1-201ENST00000278412 DEFB112Q30KQ8 113 aa9.26□□□□□ -0.93
SSRP1-201ENST00000278412 LFNGQ8NES3 379 aa9.26□□□□□ -0.93
SSRP1-201ENST00000278412 NPBQ8NG41 125 aa9.26□□□□□ -0.93
SSRP1-201ENST00000278412 JMJD1CQ15652 2540 aa9.26□□□□□ -0.93
SSRP1-201ENST00000278412 HIVEP2P31629 2446 aa9.26□□□□□ -0.93
SSRP1-201ENST00000278412 IFITM10A6NMD0 228 aa9.26□□□□□ -0.93
SSRP1-201ENST00000278412 G3V318 75 aa9.26□□□□□ -0.93
SSRP1-201ENST00000278412 SEC11BP0C7V7 166 aa9.26□□□□□ -0.93
SSRP1-201ENST00000278412 MDKP21741 143 aaPredicted RBP9.26□□□□□ -0.93
SSRP1-201ENST00000278412 CCDC144NLQ6NUI1 221 aa9.26□□□□□ -0.93
SSRP1-201ENST00000278412 C1QL4Q86Z23 238 aa9.26□□□□□ -0.93
SSRP1-201ENST00000278412 OR5T1Q8NG75 326 aa9.26□□□□□ -0.93
SSRP1-201ENST00000278412 SCGB1C1Q8TD33 95 aa9.26□□□□□ -0.93
SSRP1-201ENST00000278412 DFFBO76075 338 aa9.25□□□□□ -0.93
SSRP1-201ENST00000278412 IGHV3-23P01764 117 aa9.25□□□□□ -0.93
SSRP1-201ENST00000278412 CAMLGP49069 296 aa9.25□□□□□ -0.93
SSRP1-201ENST00000278412 EBI3Q14213 229 aa9.25□□□□□ -0.93
SSRP1-201ENST00000278412 OR4A5Q8NH83 315 aa9.25□□□□□ -0.93
SSRP1-201ENST00000278412 FKBP11Q9NYL4 201 aa9.25□□□□□ -0.93
SSRP1-201ENST00000278412 KIAA1456Q9P272 454 aa9.25□□□□□ -0.93
SSRP1-201ENST00000278412 IGHV4-59P01825 116 aa9.25□□□□□ -0.93
SSRP1-201ENST00000278412 OPRK1P41145 380 aa9.25□□□□□ -0.93
SSRP1-201ENST00000278412 BLCAPP62952 87 aa9.25□□□□□ -0.93
SSRP1-201ENST00000278412 VWC2Q2TAL6 325 aa9.25□□□□□ -0.93
SSRP1-201ENST00000278412 CYB5R2Q6BCY4 276 aa9.25□□□□□ -0.93
SSRP1-201ENST00000278412 LCN15Q6UWW0 184 aa9.25□□□□□ -0.93
SSRP1-201ENST00000278412 LRRC75A-AS1Q8N1F1 130 aa9.25□□□□□ -0.93
SSRP1-201ENST00000278412 RPP25LQ8N5L8 163 aaKnown RBP9.25□□□□□ -0.93
SSRP1-201ENST00000278412 SLC25A22Q9H936 323 aa9.25□□□□□ -0.93
SSRP1-201ENST00000278412 WDR83OSQ9Y284 106 aa9.25□□□□□ -0.93
SSRP1-201ENST00000278412 YIF1AO95070 293 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms