RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 NCBP2LA6PVI3 153 aaKnown RBP11.53□□□□□ -0.56
TRIM23-202ENST00000274327 REG1AP05451 166 aa11.53□□□□□ -0.56
TRIM23-202ENST00000274327 CD81P60033 236 aa11.53□□□□□ -0.56
TRIM23-202ENST00000274327 TMEM249Q2WGJ8 235 aa11.53□□□□□ -0.56
TRIM23-202ENST00000274327 TMEM41BQ5BJD5 291 aa11.53□□□□□ -0.56
TRIM23-202ENST00000274327 ZNF562Q6V9R5 426 aa11.53□□□□□ -0.56
TRIM23-202ENST00000274327 SLC35E3Q7Z769 313 aa11.53□□□□□ -0.56
TRIM23-202ENST00000274327 CACNG8Q8WXS5 425 aa11.53□□□□□ -0.56
TRIM23-202ENST00000274327 MGST2Q99735 147 aa11.53□□□□□ -0.56
TRIM23-202ENST00000274327 RPRMQ9NS64 109 aa11.53□□□□□ -0.56
TRIM23-202ENST00000274327 PRRC2AP48634 2157 aaKnown RBP11.53□□□□□ -0.56
TRIM23-202ENST00000274327 SOX15O60248 233 aa11.53□□□□□ -0.56
TRIM23-202ENST00000274327 OR2C1O95371 312 aa11.53□□□□□ -0.56
TRIM23-202ENST00000274327 CNIH1O95406 144 aa11.53□□□□□ -0.56
TRIM23-202ENST00000274327 TGFAP01135 160 aa11.53□□□□□ -0.56
TRIM23-202ENST00000274327 MFAP2P55001 183 aa11.53□□□□□ -0.56
TRIM23-202ENST00000274327 FXYD3Q14802 87 aa11.53□□□□□ -0.56
TRIM23-202ENST00000274327 MLANAQ16655 118 aa11.53□□□□□ -0.56
TRIM23-202ENST00000274327 ZNF506Q5JVG8 444 aa11.53□□□□□ -0.56
TRIM23-202ENST00000274327 TMEM144Q7Z5S9 345 aa11.53□□□□□ -0.56
TRIM23-202ENST00000274327 ZNF709Q8N972 641 aa11.53□□□□□ -0.56
TRIM23-202ENST00000274327 OR1P1Q8NH06 330 aa11.53□□□□□ -0.56
TRIM23-202ENST00000274327 NANPQ8TBE9 248 aa11.53□□□□□ -0.56
TRIM23-202ENST00000274327 PIFOQ8TCI5 191 aa11.53□□□□□ -0.56
TRIM23-202ENST00000274327 SSMEM1Q8WWF3 244 aa11.53□□□□□ -0.56
TRIM23-202ENST00000274327 GGTLC1Q9BX51 225 aa11.53□□□□□ -0.56
TRIM23-202ENST00000274327 GSN-AS1Q9NRJ2 163 aa11.53□□□□□ -0.56
TRIM23-202ENST00000274327 NDUFS6O75380 124 aaKnown RBP11.52□□□□□ -0.57
TRIM23-202ENST00000274327 OPRK1P41145 380 aa11.52□□□□□ -0.57
TRIM23-202ENST00000274327 ELLP55199 621 aaPredicted RBP11.52□□□□□ -0.57
TRIM23-202ENST00000274327 GAMTQ14353 236 aa11.52□□□□□ -0.57
TRIM23-202ENST00000274327 KHDC3LQ587J8 217 aa11.52□□□□□ -0.57
TRIM23-202ENST00000274327 SPSB3Q6PJ21 355 aa11.52□□□□□ -0.57
TRIM23-202ENST00000274327 TEPPQ6URK8 271 aa11.52□□□□□ -0.57
TRIM23-202ENST00000274327 SLC16A13Q7RTY0 426 aa11.52□□□□□ -0.57
TRIM23-202ENST00000274327 FNDC4Q9H6D8 234 aaPredicted RBP11.52□□□□□ -0.57
TRIM23-202ENST00000274327 F11RQ9Y624 299 aaKnown RBP11.52□□□□□ -0.57
TRIM23-202ENST00000274327 HLA-DRB1P01911 266 aa11.51□□□□□ -0.57
TRIM23-202ENST00000274327 MBP02144 154 aa11.51□□□□□ -0.57
TRIM23-202ENST00000274327 CX3CL1P78423 397 aa11.51□□□□□ -0.57
TRIM23-202ENST00000274327 NDPQ00604 133 aa11.51□□□□□ -0.57
TRIM23-202ENST00000274327 PNRC1Q12796 327 aaPredicted RBP11.51□□□□□ -0.57
TRIM23-202ENST00000274327 ZNF726P1Q15940 193 aa11.51□□□□□ -0.57
TRIM23-202ENST00000274327 FFAR4Q5NUL3 377 aa11.51□□□□□ -0.57
TRIM23-202ENST00000274327 TMEM242Q9NWH2 141 aa11.51□□□□□ -0.57
TRIM23-202ENST00000274327 SOX21Q9Y651 276 aaPredicted RBP11.51□□□□□ -0.57
TRIM23-202ENST00000274327 IGHV7-81A0A0B4J1V7 117 aa11.51□□□□□ -0.57
TRIM23-202ENST00000274327 GATCO43716 136 aaKnown RBP11.51□□□□□ -0.57
TRIM23-202ENST00000274327 CRYGCP07315 174 aa11.51□□□□□ -0.57
TRIM23-202ENST00000274327 APELAP0DMC3 54 aa11.51□□□□□ -0.57
TRIM23-202ENST00000274327 C19orf35Q6ZS72 473 aa11.51□□□□□ -0.57
TRIM23-202ENST00000274327 FAM24BQ8N5W8 94 aa11.51□□□□□ -0.57
TRIM23-202ENST00000274327 ABHD5Q8WTS1 349 aa11.51□□□□□ -0.57
TRIM23-202ENST00000274327 MBD3L1Q8WWY6 194 aa11.51□□□□□ -0.57
TRIM23-202ENST00000274327 ARPC1AQ92747 370 aa11.51□□□□□ -0.57
TRIM23-202ENST00000274327 SLC35E1Q96K37 410 aa11.51□□□□□ -0.57
TRIM23-202ENST00000274327 NIT2Q9NQR4 276 aa11.51□□□□□ -0.57
TRIM23-202ENST00000274327 CORTO00230 105 aa11.5□□□□□ -0.57
TRIM23-202ENST00000274327 FSHBP01225 129 aa11.5□□□□□ -0.57
TRIM23-202ENST00000274327 SRP19P09132 144 aaKnown RBP11.5□□□□□ -0.57
TRIM23-202ENST00000274327 HOXA5P20719 270 aa11.5□□□□□ -0.57
TRIM23-202ENST00000274327 BPIFB3P59826 476 aa11.5□□□□□ -0.57
TRIM23-202ENST00000274327 PMS2P11Q13670 270 aa11.5□□□□□ -0.57
TRIM23-202ENST00000274327 AKIRIN2Q53H80 203 aa11.5□□□□□ -0.57
TRIM23-202ENST00000274327 ASPHD1Q5U4P2 390 aa11.5□□□□□ -0.57
TRIM23-202ENST00000274327 TVP23CQ96ET8 276 aa11.5□□□□□ -0.57
TRIM23-202ENST00000274327 RBM14Q96PK6 669 aaKnown RBP11.5□□□□□ -0.57
TRIM23-202ENST00000274327 NIPSNAP3BQ9BS92 247 aa11.5□□□□□ -0.57
TRIM23-202ENST00000274327 DMRT1Q9Y5R6 373 aa11.5□□□□□ -0.57
TRIM23-202ENST00000274327 IGKV1OR2-108A0A075B7D4 117 aa11.49□□□□□ -0.57
TRIM23-202ENST00000274327 FBP1P09467 338 aa11.49□□□□□ -0.57
TRIM23-202ENST00000274327 CDX1P47902 265 aaPredicted RBP11.49□□□□□ -0.57
TRIM23-202ENST00000274327 RPL29P47914 159 aaKnown RBP11.49□□□□□ -0.57
TRIM23-202ENST00000274327 SSX7Q7RTT5 188 aa11.49□□□□□ -0.57
TRIM23-202ENST00000274327 RPP25LQ8N5L8 163 aaKnown RBP11.49□□□□□ -0.57
TRIM23-202ENST00000274327 OR2T6Q8NHC8 308 aa11.49□□□□□ -0.57
TRIM23-202ENST00000274327 ISOC2Q96AB3 205 aa11.49□□□□□ -0.57
TRIM23-202ENST00000274327 RCC1LQ96I51 464 aaKnown RBP11.49□□□□□ -0.57
TRIM23-202ENST00000274327 SSX3Q99909 188 aa11.49□□□□□ -0.57
TRIM23-202ENST00000274327 RASL11BQ9BPW5 248 aa11.49□□□□□ -0.57
TRIM23-202ENST00000274327 FAM103A1Q9BTL3 118 aaKnown RBP11.49□□□□□ -0.57
TRIM23-202ENST00000274327 KCNIP2Q9NS61 270 aa11.49□□□□□ -0.57
TRIM23-202ENST00000274327 PXMP4Q9Y6I8 212 aa11.49□□□□□ -0.57
TRIM23-202ENST00000274327 ELOA3CA0A087WX78 387 aaPredicted RBP11.49□□□□□ -0.57
TRIM23-202ENST00000274327 NPIPB5A8MRT5 1133 aa11.49□□□□□ -0.57
TRIM23-202ENST00000274327 H3BQ15 152 aa11.49□□□□□ -0.57
TRIM23-202ENST00000274327 YIF1AO95070 293 aa11.49□□□□□ -0.57
TRIM23-202ENST00000274327 EGR2P11161 476 aaPredicted RBP11.49□□□□□ -0.57
TRIM23-202ENST00000274327 AKR1C3P42330 323 aa11.49□□□□□ -0.57
TRIM23-202ENST00000274327 RAB31Q13636 194 aa11.49□□□□□ -0.57
TRIM23-202ENST00000274327 ACOT6Q3I5F7 207 aaPredicted RBP11.49□□□□□ -0.57
TRIM23-202ENST00000274327 MIC13Q5XKP0 118 aa11.49□□□□□ -0.57
TRIM23-202ENST00000274327 ETFRF1Q6IPR1 90 aa11.49□□□□□ -0.57
TRIM23-202ENST00000274327 C5orf56Q8N8D9 126 aa11.49□□□□□ -0.57
TRIM23-202ENST00000274327 WFDC11Q8NEX6 87 aa11.49□□□□□ -0.57
TRIM23-202ENST00000274327 OR10G9Q8NGN4 311 aa11.49□□□□□ -0.57
TRIM23-202ENST00000274327 OR10G7Q8NGN6 311 aa11.49□□□□□ -0.57
TRIM23-202ENST00000274327 SLC25A33Q9BSK2 321 aa11.49□□□□□ -0.57
TRIM23-202ENST00000274327 WNT10AQ9GZT5 417 aa11.49□□□□□ -0.57
TRIM23-202ENST00000274327 MRPL36Q9P0J6 103 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms