RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 OR13A1Q8NGR1 328 aa10.55□□□□□ -0.72
HERC6-202ENST00000273960 OR4A5Q8NH83 315 aa10.55□□□□□ -0.72
HERC6-202ENST00000273960 PEF1Q9UBV8 284 aaKnown RBP10.55□□□□□ -0.72
HERC6-202ENST00000273960 MAGEA5P43359 124 aa10.54□□□□□ -0.72
HERC6-202ENST00000273960 PLP1P60201 277 aa10.54□□□□□ -0.72
HERC6-202ENST00000273960 UBE2L3P68036 154 aaKnown RBP10.54□□□□□ -0.72
HERC6-202ENST00000273960 FOXF2Q12947 444 aa10.54□□□□□ -0.72
HERC6-202ENST00000273960 WFDC3Q8IUB2 231 aa10.54□□□□□ -0.72
HERC6-202ENST00000273960 ABI3Q9P2A4 366 aa10.54□□□□□ -0.72
HERC6-202ENST00000273960 Q0VFX4 171 aa10.54□□□□□ -0.72
HERC6-202ENST00000273960 FAM214BQ7L5A3 538 aa10.54□□□□□ -0.72
HERC6-202ENST00000273960 RAB1CQ92928 201 aa10.54□□□□□ -0.72
HERC6-202ENST00000273960 KLF13Q9Y2Y9 288 aaPredicted RBP10.54□□□□□ -0.72
HERC6-202ENST00000273960 CFAP47Q6ZTR5 3102 aa10.54□□□□□ -0.72
HERC6-202ENST00000273960 SAA2-SAA4A0A096LPE2 208 aa10.54□□□□□ -0.72
HERC6-202ENST00000273960 SPAARA0A1B0GVQ0 90 aa10.54□□□□□ -0.72
HERC6-202ENST00000273960 A0A1W2PRE2 83 aa10.54□□□□□ -0.72
HERC6-202ENST00000273960 SP9P0CG40 484 aa10.54□□□□□ -0.72
HERC6-202ENST00000273960 CCL11P51671 97 aa10.54□□□□□ -0.72
HERC6-202ENST00000273960 TBR1Q16650 682 aa10.54□□□□□ -0.72
HERC6-202ENST00000273960 UTF1Q5T230 341 aa10.54□□□□□ -0.72
HERC6-202ENST00000273960 BPIFA4PQ86YQ2 179 aa10.54□□□□□ -0.72
HERC6-202ENST00000273960 OR8A1Q8NGG7 326 aa10.54□□□□□ -0.72
HERC6-202ENST00000273960 OR9G1Q8NH87 305 aa10.54□□□□□ -0.72
HERC6-202ENST00000273960 JMJD8Q96S16 334 aa10.54□□□□□ -0.72
HERC6-202ENST00000273960 TMEM191AQ9H0A3 160 aa10.54□□□□□ -0.72
HERC6-202ENST00000273960 HES4Q9HCC6 221 aa10.54□□□□□ -0.72
HERC6-202ENST00000273960 TCF19Q9Y242 345 aa10.54□□□□□ -0.72
HERC6-202ENST00000273960 TET2Q6N021 2002 aaPredicted RBP10.54□□□□□ -0.72
HERC6-202ENST00000273960 PINLYPA6NC86 204 aa10.53□□□□□ -0.72
HERC6-202ENST00000273960 PAX2Q02962 417 aa10.53□□□□□ -0.72
HERC6-202ENST00000273960 GGNQ86UU5 652 aa10.53□□□□□ -0.72
HERC6-202ENST00000273960 C1orf159Q96HA4 380 aa10.53□□□□□ -0.72
HERC6-202ENST00000273960 TRAV9-1A0A075B6T8 112 aa10.53□□□□□ -0.72
HERC6-202ENST00000273960 IGHV1-24A0A0C4DH33 117 aa10.53□□□□□ -0.72
HERC6-202ENST00000273960 TMEM30CPA0ZSE6 113 aa10.53□□□□□ -0.72
HERC6-202ENST00000273960 C9JCJ5 164 aa10.53□□□□□ -0.72
HERC6-202ENST00000273960 J3QT63 122 aa10.53□□□□□ -0.72
HERC6-202ENST00000273960 GFRA3O60609 400 aa10.53□□□□□ -0.72
HERC6-202ENST00000273960 ARR3P36575 388 aa10.53□□□□□ -0.72
HERC6-202ENST00000273960 OR1C1Q15619 314 aa10.53□□□□□ -0.72
HERC6-202ENST00000273960 POM121L2Q96KW2 1035 aa10.53□□□□□ -0.72
HERC6-202ENST00000273960 TAAR6Q96RI8 345 aa10.53□□□□□ -0.72
HERC6-202ENST00000273960 OSTCQ9NRP0 149 aa10.53□□□□□ -0.72
HERC6-202ENST00000273960 NTN3O00634 580 aaPredicted RBP10.53□□□□□ -0.72
HERC6-202ENST00000273960 ISLRO14498 428 aa10.53□□□□□ -0.72
HERC6-202ENST00000273960 IGLC1P0CG04 106 aa10.53□□□□□ -0.72
HERC6-202ENST00000273960 SRSF7Q16629 238 aaKnown RBP eCLIP10.53□□□□□ -0.72
HERC6-202ENST00000273960 DEFB124Q8NES8 71 aa10.53□□□□□ -0.72
HERC6-202ENST00000273960 TMEM140Q9NV12 185 aa10.53□□□□□ -0.72
HERC6-202ENST00000273960 LOC389332A0A1B0GUA5 103 aa10.52□□□□□ -0.72
HERC6-202ENST00000273960 HIST1H1EP10412 219 aaKnown RBP10.52□□□□□ -0.72
HERC6-202ENST00000273960 OR4S2Q8NH73 311 aa10.52□□□□□ -0.72
HERC6-202ENST00000273960 Q8TCH9 128 aa10.52□□□□□ -0.72
HERC6-202ENST00000273960 URB1-AS1Q96HZ7 61 aa10.52□□□□□ -0.72
HERC6-202ENST00000273960 BOKQ9UMX3 212 aaPredicted RBP10.52□□□□□ -0.72
HERC6-202ENST00000273960 ZNF835Q9Y2P0 537 aa10.52□□□□□ -0.72
HERC6-202ENST00000273960 MGAQ8IWI9 3026 aa10.52□□□□□ -0.73
HERC6-202ENST00000273960 PKDREJQ9NTG1 2253 aa10.52□□□□□ -0.73
HERC6-202ENST00000273960 C9orf172C9J069 976 aa10.52□□□□□ -0.73
HERC6-202ENST00000273960 IGLV2-8P01709 118 aa10.52□□□□□ -0.73
HERC6-202ENST00000273960 FAM71F2Q6NXP2 309 aa10.52□□□□□ -0.73
HERC6-202ENST00000273960 B4GALT7Q9UBV7 327 aa10.52□□□□□ -0.73
HERC6-202ENST00000273960 VWC2LB2RUY7 222 aa10.52□□□□□ -0.73
HERC6-202ENST00000273960 FKBP2P26885 142 aaKnown RBP10.52□□□□□ -0.73
HERC6-202ENST00000273960 SF3B5Q9BWJ5 86 aaKnown RBP10.52□□□□□ -0.73
HERC6-202ENST00000273960 POLDIP2Q9Y2S7 368 aa10.52□□□□□ -0.73
HERC6-202ENST00000273960 SMIM27A0A1W2PRY6 76 aa10.51□□□□□ -0.73
HERC6-202ENST00000273960 ACP7Q6ZNF0 438 aa10.51□□□□□ -0.73
HERC6-202ENST00000273960 MOB1BQ7L9L4 216 aa10.51□□□□□ -0.73
HERC6-202ENST00000273960 RTL8AQ9BWD3 113 aa10.51□□□□□ -0.73
HERC6-202ENST00000273960 MAP1LC3CQ9BXW4 147 aa10.51□□□□□ -0.73
HERC6-202ENST00000273960 ST20Q9HBF5 79 aa10.51□□□□□ -0.73
HERC6-202ENST00000273960 AMMECR1Q9Y4X0 333 aaPredicted RBP10.51□□□□□ -0.73
HERC6-202ENST00000273960 CD5LO43866 347 aa10.5□□□□□ -0.73
HERC6-202ENST00000273960 P0C879 139 aa10.5□□□□□ -0.73
HERC6-202ENST00000273960 APELAP0DMC3 54 aa10.5□□□□□ -0.73
HERC6-202ENST00000273960 COLCA1Q6ZS62 124 aa10.5□□□□□ -0.73
HERC6-202ENST00000273960 ZNF503Q96F45 646 aa10.5□□□□□ -0.73
HERC6-202ENST00000273960 TXNDC17Q9BRA2 123 aa10.5□□□□□ -0.73
HERC6-202ENST00000273960 TMUB1Q9BVT8 246 aa10.5□□□□□ -0.73
HERC6-202ENST00000273960 WNK2Q9Y3S1 2297 aa10.5□□□□□ -0.73
HERC6-202ENST00000273960 TNRC6AQ8NDV7 1962 aaKnown RBP10.5□□□□□ -0.73
HERC6-202ENST00000273960 CHEK1O14757 476 aa10.5□□□□□ -0.73
HERC6-202ENST00000273960 SPINT2O43291 252 aa10.5□□□□□ -0.73
HERC6-202ENST00000273960 COMMD5Q9GZQ3 224 aa10.5□□□□□ -0.73
HERC6-202ENST00000273960 IGHV3-21A0A0B4J1V1 117 aa10.5□□□□□ -0.73
HERC6-202ENST00000273960 MPDU1O75352 247 aa10.5□□□□□ -0.73
HERC6-202ENST00000273960 NCR2O95944 276 aa10.5□□□□□ -0.73
HERC6-202ENST00000273960 AREGP15514 252 aa10.5□□□□□ -0.73
HERC6-202ENST00000273960 AZU1P20160 251 aa10.5□□□□□ -0.73
HERC6-202ENST00000273960 NMUP48645 174 aa10.5□□□□□ -0.73
HERC6-202ENST00000273960 NHLH1Q02575 133 aa10.5□□□□□ -0.73
HERC6-202ENST00000273960 SRSF6Q13247 344 aaKnown RBP10.5□□□□□ -0.73
HERC6-202ENST00000273960 TMEM97Q5BJF2 176 aa10.5□□□□□ -0.73
HERC6-202ENST00000273960 GTF2H5Q6ZYL4 71 aa10.5□□□□□ -0.73
HERC6-202ENST00000273960 CNEP1R1Q8N9A8 125 aa10.5□□□□□ -0.73
HERC6-202ENST00000273960 OR10AG1Q8NH19 301 aa10.5□□□□□ -0.73
HERC6-202ENST00000273960 RNF138Q8WVD3 245 aa10.5□□□□□ -0.73
HERC6-202ENST00000273960 COQ2Q96H96 371 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms